Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30501
         (501 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a pr...    93   7e-19
BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a ...    93   7e-19
AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a ...    93   7e-19
AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A ...    93   7e-19
BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for IM...    92   1e-18
BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a ...    90   5e-18
AB007178-1|BAA25837.1|   34|Homo sapiens ribosomal protein L27a ...    45   1e-04
AY358091-1|AAQ88458.1|  126|Homo sapiens VFLL3057 protein.             29   6.9  
AK126225-1|BAC86496.1|  139|Homo sapiens protein ( Homo sapiens ...    29   9.1  

>U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score = 92.7 bits (220), Expect = 7e-19
 Identities = 38/73 (52%), Positives = 49/73 (67%)
 Frame = +1

Query: 37  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 216
           M +  +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 217 FHFRKNKNFCPVL 255
           +H ++N++FCP +
Sbjct: 61  YHLKRNQSFCPTV 73



 Score = 70.1 bits (164), Expect = 4e-12
 Identities = 37/88 (42%), Positives = 46/88 (52%)
 Frame = +3

Query: 216 FPL*KEQEFLSSFNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 395
           + L + Q F  + NLDKLWTLVSEQTR+  A    G  P+I++V++           PKQ
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 120

Query: 396 PVIVXXXXXXXXXXXXXXDVGGACVLSA 479
           PVIV               VGGACVL A
Sbjct: 121 PVIVKAKFFSRRAEEKIKSVGGACVLVA 148


>BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score = 92.7 bits (220), Expect = 7e-19
 Identities = 38/73 (52%), Positives = 49/73 (67%)
 Frame = +1

Query: 37  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 216
           M +  +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 217 FHFRKNKNFCPVL 255
           +H ++N++FCP +
Sbjct: 61  YHLKRNQSFCPTV 73



 Score = 70.1 bits (164), Expect = 4e-12
 Identities = 37/88 (42%), Positives = 46/88 (52%)
 Frame = +3

Query: 216 FPL*KEQEFLSSFNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 395
           + L + Q F  + NLDKLWTLVSEQTR+  A    G  P+I++V++           PKQ
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 120

Query: 396 PVIVXXXXXXXXXXXXXXDVGGACVLSA 479
           PVIV               VGGACVL A
Sbjct: 121 PVIVKAKFFSRRAEEKIKSVGGACVLVA 148


>AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a
           protein.
          Length = 106

 Score = 92.7 bits (220), Expect = 7e-19
 Identities = 38/73 (52%), Positives = 49/73 (67%)
 Frame = +1

Query: 37  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 216
           M +  +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 217 FHFRKNKNFCPVL 255
           +H ++N++FCP +
Sbjct: 61  YHLKRNQSFCPTV 73



 Score = 50.0 bits (114), Expect = 5e-06
 Identities = 22/46 (47%), Positives = 31/46 (67%)
 Frame = +3

Query: 216 FPL*KEQEFLSSFNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKA 353
           + L + Q F  + NLDKLWTLVSEQTR+  A    G  P+I++V++
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 106


>AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A
           protein.
          Length = 148

 Score = 92.7 bits (220), Expect = 7e-19
 Identities = 38/73 (52%), Positives = 49/73 (67%)
 Frame = +1

Query: 37  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 216
           M +  +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 217 FHFRKNKNFCPVL 255
           +H ++N++FCP +
Sbjct: 61  YHLKRNQSFCPTV 73



 Score = 70.1 bits (164), Expect = 4e-12
 Identities = 37/88 (42%), Positives = 46/88 (52%)
 Frame = +3

Query: 216 FPL*KEQEFLSSFNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 395
           + L + Q F  + NLDKLWTLVSEQTR+  A    G  P+I++V++           PKQ
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 120

Query: 396 PVIVXXXXXXXXXXXXXXDVGGACVLSA 479
           PVIV               VGGACVL A
Sbjct: 121 PVIVKAKFFSRRAEEKIKSVGGACVLVA 148


>BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for
           IMAGE:3543815) protein.
          Length = 147

 Score = 91.9 bits (218), Expect = 1e-18
 Identities = 37/68 (54%), Positives = 47/68 (69%)
 Frame = +1

Query: 52  KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 231
           +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM+++H ++
Sbjct: 5   RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 64

Query: 232 NKNFCPVL 255
           N++FCP +
Sbjct: 65  NQSFCPTV 72



 Score = 70.1 bits (164), Expect = 4e-12
 Identities = 37/88 (42%), Positives = 46/88 (52%)
 Frame = +3

Query: 216 FPL*KEQEFLSSFNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 395
           + L + Q F  + NLDKLWTLVSEQTR+  A    G  P+I++V++           PKQ
Sbjct: 60  YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 119

Query: 396 PVIVXXXXXXXXXXXXXXDVGGACVLSA 479
           PVIV               VGGACVL A
Sbjct: 120 PVIVKAKFFSRRAEEKIKSVGGACVLVA 147


>BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score = 89.8 bits (213), Expect = 5e-18
 Identities = 37/73 (50%), Positives = 49/73 (67%)
 Frame = +1

Query: 37  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 216
           M +  +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 217 FHFRKNKNFCPVL 255
           ++ ++N++FCP +
Sbjct: 61  YNLKRNQSFCPTV 73



 Score = 66.9 bits (156), Expect = 4e-11
 Identities = 36/88 (40%), Positives = 45/88 (51%)
 Frame = +3

Query: 216 FPL*KEQEFLSSFNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 395
           + L + Q F  + NLDKLWTLVSEQTR+  A    G  P+I++V++            KQ
Sbjct: 61  YNLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLAKQ 120

Query: 396 PVIVXXXXXXXXXXXXXXDVGGACVLSA 479
           PVIV               VGGACVL A
Sbjct: 121 PVIVKAKLFSRRAEEKIKSVGGACVLVA 148


>AB007178-1|BAA25837.1|   34|Homo sapiens ribosomal protein L27a
           protein.
          Length = 34

 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 19/33 (57%), Positives = 25/33 (75%)
 Frame = +3

Query: 255 NLDKLWTLVSEQTRLKYASAPDGKVPVINIVKA 353
           NLDKLWTLVSEQTR+  A    G  P+I++V++
Sbjct: 2   NLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 34


>AY358091-1|AAQ88458.1|  126|Homo sapiens VFLL3057 protein.
          Length = 126

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = -2

Query: 206 PSLPKYPGWYLSMLIL*WCSPPALPRPPGCLRCFPIRPCP---*LT*PLSFLVF 54
           P+LPK+PG  ++ L   W S    P P G +    + PCP       PL FLV+
Sbjct: 55  PALPKWPGHLMAELQGPWLSLAHCPSPSGPI----VLPCPFRVQFEPPLQFLVW 104


>AK126225-1|BAC86496.1|  139|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44237 fis, clone THYMU3007845. ).
          Length = 139

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 12/43 (27%), Positives = 15/43 (34%)
 Frame = +2

Query: 350 SWILQVARQRQTPQTTCHSKSKVLLKISREENQGCGWCLCTIC 478
           +W L      Q PQ        + L   R   + C WC C  C
Sbjct: 71  AWFLSPVHHSQIPQLAACPLQSLRLSKPRSPGRCCAWCGCLNC 113


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,172,195
Number of Sequences: 237096
Number of extensions: 1451084
Number of successful extensions: 3037
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3030
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)