Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30500
         (729 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.9  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.5  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   3.3  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   4.4  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   4.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   4.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   4.4  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   5.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   5.8  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +2

Query: 140 PYDTQCRQCGSNADICSSNTRWSFGLCSKHSS*Y 241
           PY    + CG   D CS+N   +   C ++ + Y
Sbjct: 88  PYGYTGKDCGEYVDWCSTNPCENQATCVQNKNQY 121


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 54  YAPAPSYPAQNRNPPKYRRQSSPTAFASGPMIHNAG 161
           Y P+ SYPA   + P+ +  ++P A  S P     G
Sbjct: 160 YHPSSSYPANEISCPQVQWSATPQA-GSTPTYQTQG 194


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = -2

Query: 512 DFFVWVVG*NLQNAV*RQMFDYNLMAKIPQMQENFQAFFF 393
           D F W++  N+  A  + +   +++ K    Q+N   F F
Sbjct: 114 DIFGWIILCNIFEAAAKSLIYIDMIIKKNVTQQNSDVFIF 153


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +2

Query: 329 LSPKGLGGNVIQNPVNNNL 385
           L+PKG GG  I +P N NL
Sbjct: 48  LAPKGFGGVQI-SPPNENL 65


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +2

Query: 329 LSPKGLGGNVIQNPVNNNL 385
           L+PKG GG  I +P N NL
Sbjct: 49  LAPKGFGGVQI-SPPNENL 66


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +2

Query: 329 LSPKGLGGNVIQNPVNNNL 385
           L+PKG GG  I +P N NL
Sbjct: 49  LAPKGFGGVQI-SPPNENL 66


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/51 (25%), Positives = 20/51 (39%)
 Frame = +2

Query: 62  RTVLPSTEQEPPEVSTSVKSNSIRFWPYDTQCRQCGSNADICSSNTRWSFG 214
           RT   ST + PP  + S   N +       +C+Q     ++C    R   G
Sbjct: 447 RTTTVSTTEAPPAPAVSNPQNEVDGSVAPKECKQDFMPHELCDKYYRCVHG 497


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 343 FRWECNTKSCQ 375
           +RWEC +  CQ
Sbjct: 25  WRWECKSNYCQ 35


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +2

Query: 302 DLSYNQISSLSPKG 343
           DLS+N ISSLS  G
Sbjct: 375 DLSWNSISSLSHGG 388


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,768
Number of Sequences: 336
Number of extensions: 5298
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)