Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30499
         (719 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1RCJ4 Cluster: Putative uncharacterized protein; n=3; ...   119   6e-26
UniRef50_Q01Y75 Cluster: Putative uncharacterized protein; n=1; ...    33   5.4  
UniRef50_A7ISJ0 Cluster: Putative uncharacterized protein DS34; ...    33   7.1  

>UniRef50_Q1RCJ4 Cluster: Putative uncharacterized protein; n=3;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli (strain UTI89 / UPEC)
          Length = 104

 Score =  119 bits (287), Expect = 6e-26
 Identities = 57/76 (75%), Positives = 58/76 (76%)
 Frame = -1

Query: 527 LPGKYQSGSYSPNTFCKIVKQFSFIDRIRIYSLHPCLNKHLSIQSNRDWLXXXXXXXXXX 348
           +PGKYQ      NTFCKIVKQFSFIDRIRIYSLHPCLNKHLSIQSNR WL          
Sbjct: 1   MPGKYQMRFLLANTFCKIVKQFSFIDRIRIYSLHPCLNKHLSIQSNRGWLSMSLFSDYSS 60

Query: 347 XSEMHNNLTIDYYLAL 300
            SEMHNNLTIDYYLAL
Sbjct: 61  SSEMHNNLTIDYYLAL 76


>UniRef50_Q01Y75 Cluster: Putative uncharacterized protein; n=1;
           Solibacter usitatus Ellin6076|Rep: Putative
           uncharacterized protein - Solibacter usitatus (strain
           Ellin6076)
          Length = 105

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +3

Query: 459 RELLNNFAKCIGRVRTALVLSGQPPDDSLLGMRI 560
           RE + +   C GRV     +SG PPD SL G R+
Sbjct: 31  REAIPDLPTCAGRVLKLDSISGAPPDSSLFGRRV 64


>UniRef50_A7ISJ0 Cluster: Putative uncharacterized protein DS34;
           n=1; Mycosphaerella pini|Rep: Putative uncharacterized
           protein DS34 - Mycosphaerella pini (Dothistroma pini)
          Length = 889

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 13/35 (37%), Positives = 24/35 (68%)
 Frame = +1

Query: 439 ILIRSIKENCLTILQNVLGE*EPLWYFPGNRQTIP 543
           I +++ +E  +T LQ ++ E   +WYF G+R+T+P
Sbjct: 631 IRLQASREEIITDLQGMMTERLKVWYFAGDRRTLP 665


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,867,671
Number of Sequences: 1657284
Number of extensions: 11473170
Number of successful extensions: 19770
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19769
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)