Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30499
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   1.1  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   5.8  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   5.8  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   5.8  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   7.6  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   7.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   7.6  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 82  HAPFTSSLFLLCSRAVIKSKRNR*KYS 162
           H  F S LFLLC R++ +  + + ++S
Sbjct: 12  HVWFLSKLFLLCPRSIDEKIKRQERHS 38


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 429 QAIDSDTVNKRELLNNFAKCIGRVRTA 509
           Q +D   V    L  N AKC  + RTA
Sbjct: 56  QGVDLKRVLPEALQTNCAKCTEKQRTA 82


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -2

Query: 502 LTRPIHFAKLLSNSLLLTVSESIACIHALTNIFQFNQI-EIG*ACLSFLITVP 347
           L + + + + + +SLL   S    CI AL  I  F  I E+  A  S  + VP
Sbjct: 84  LQQKLRYFEEVFSSLLSCCSVIFGCIFALKVIEVFKNIEEVDVAFRSLAVWVP 136


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -2

Query: 502 LTRPIHFAKLLSNSLLLTVSESIACIHALTNIFQFNQI-EIG*ACLSFLITVP 347
           L + + + + + +SLL   S    CI AL  I  F  I E+  A  S  + VP
Sbjct: 84  LQQKLRYFEEVFSSLLSCCSVIFGCIFALKVIEVFKNIEEVDVAFRSLAVWVP 136


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 458 FIDRIRIYSLHPCLNKHLSIQSNRD 384
           F+    +YSL+ C+N  + +  NR+
Sbjct: 301 FVILTLLYSLNSCVNPWIYLAFNRE 325


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -1

Query: 617 CVSPVETHYSFRDAPLIVNYSHSQ 546
           C    E+ Y F D     NY ++Q
Sbjct: 196 CQYDTESSYQFNDPQFNFNYQYNQ 219


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -1

Query: 617 CVSPVETHYSFRDAPLIVNYSHSQ 546
           C    E+ Y F D     NY ++Q
Sbjct: 216 CQYDTESSYQFNDPQFNFNYQYNQ 239


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,354
Number of Sequences: 336
Number of extensions: 3148
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)