Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30499
         (719 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like p...    29   6.4  
AY075164-1|AAL68034.1|  206|Drosophila melanogaster AT05466p pro...    29   8.4  

>X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like
          protein protein.
          Length = 110

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +1

Query: 10 VAAALELVDPPAC 48
          VAAALELVDPP C
Sbjct: 6  VAAALELVDPPGC 18


>AY075164-1|AAL68034.1|  206|Drosophila melanogaster AT05466p
           protein.
          Length = 206

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = -2

Query: 79  SSVSFERN*LSRPGDPLVLERPP 11
           S++SF+R+ L RPG P +LE+ P
Sbjct: 124 SALSFQRSFLRRPGGPPLLEQEP 146


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,288,025
Number of Sequences: 53049
Number of extensions: 524701
Number of successful extensions: 812
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)