Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30498
(708 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 207 5e-54
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 207 5e-54
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 207 5e-54
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 207 6e-54
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 206 1e-53
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 206 1e-53
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 196 9e-51
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 87 8e-18
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 87 8e-18
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 87 1e-17
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 87 1e-17
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 86 2e-17
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 86 2e-17
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 86 2e-17
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 85 4e-17
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 85 4e-17
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 64 9e-11
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 64 1e-10
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 36 0.035
At3g62210.1 68416.m06989 expressed protein contains Pfam profile... 33 0.25
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.3
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 30 1.7
At5g64430.1 68418.m08093 octicosapeptide/Phox/Bem1p (PB1) domain... 29 4.0
At5g45330.1 68418.m05564 expressed protein ; expression supporte... 28 5.3
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 28 5.3
At1g68080.1 68414.m07777 expressed protein 28 5.3
At3g03060.1 68416.m00302 AAA-type ATPase family protein contains... 28 7.0
At1g29410.2 68414.m03599 phosphoribosylanthranilate isomerase, p... 28 7.0
At5g19820.1 68418.m02355 PBS lyase HEAT-like repeat-containing p... 27 9.2
At2g19390.1 68415.m02262 expressed protein 27 9.2
At1g34580.1 68414.m04298 monosaccharide transporter, putative si... 27 9.2
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 207 bits (506), Expect = 5e-54
Identities = 89/109 (81%), Positives = 100/109 (91%)
Frame = +2
Query: 245 EGLHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKR 424
+ HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKR
Sbjct: 280 KAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339
Query: 425 TIQFVDWCPTGFKVGINYQPPTVVPGGDWAKVQRAVCMLSNTTAIAEAW 571
TIQFVDWCPTGFK GINYQPPTVVPGGD AKVQRAVCM+SN+T++AE +
Sbjct: 340 TIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVF 388
Score = 156 bits (379), Expect = 1e-38
Identities = 93/221 (42%), Positives = 120/221 (54%), Gaps = 1/221 (0%)
Frame = +3
Query: 3 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 182
D + ++DNEAIYDICRR+L+IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTN
Sbjct: 199 DVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN 258
Query: 183 LVPYPRIHFPLVTYAPVISAEKAYMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCC 362
LVPYPRIHF L +YAPVISAEKA+ A P + P ++A C
Sbjct: 259 LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP-RHGKYMACCL 317
Query: 363 TVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPW-CPEATGPRFNVXXXX 539
++ + + + P PP P +
Sbjct: 318 MYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCM 377
Query: 540 XXXXXXXXKLGARLDHKFRLMYAKAWLFVALVWSGDGMEAG 662
++ +R+DHKF LMYAK FV + G+GME G
Sbjct: 378 ISNSTSVAEVFSRIDHKFDLMYAKR-AFVHW-YVGEGMEEG 416
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 207 bits (506), Expect = 5e-54
Identities = 89/109 (81%), Positives = 100/109 (91%)
Frame = +2
Query: 245 EGLHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKR 424
+ HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKR
Sbjct: 280 KAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339
Query: 425 TIQFVDWCPTGFKVGINYQPPTVVPGGDWAKVQRAVCMLSNTTAIAEAW 571
TIQFVDWCPTGFK GINYQPPTVVPGGD AKVQRAVCM+SN+T++AE +
Sbjct: 340 TIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVF 388
Score = 156 bits (378), Expect = 2e-38
Identities = 93/221 (42%), Positives = 119/221 (53%), Gaps = 1/221 (0%)
Frame = +3
Query: 3 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 182
D + ++DNEAIYDICRR+L IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTN
Sbjct: 199 DVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN 258
Query: 183 LVPYPRIHFPLVTYAPVISAEKAYMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCC 362
LVPYPRIHF L +YAPVISAEKA+ A P + P ++A C
Sbjct: 259 LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP-RHGKYMACCL 317
Query: 363 TVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPW-CPEATGPRFNVXXXX 539
++ + + + P PP P +
Sbjct: 318 MYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCM 377
Query: 540 XXXXXXXXKLGARLDHKFRLMYAKAWLFVALVWSGDGMEAG 662
++ +R+DHKF LMYAK FV + G+GME G
Sbjct: 378 ISNSTSVAEVFSRIDHKFDLMYAKR-AFVHW-YVGEGMEEG 416
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 207 bits (506), Expect = 5e-54
Identities = 89/109 (81%), Positives = 100/109 (91%)
Frame = +2
Query: 245 EGLHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKR 424
+ HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKR
Sbjct: 280 KAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339
Query: 425 TIQFVDWCPTGFKVGINYQPPTVVPGGDWAKVQRAVCMLSNTTAIAEAW 571
TIQFVDWCPTGFK GINYQPPTVVPGGD AKVQRAVCM+SN+T++AE +
Sbjct: 340 TIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVF 388
Score = 156 bits (378), Expect = 2e-38
Identities = 93/221 (42%), Positives = 119/221 (53%), Gaps = 1/221 (0%)
Frame = +3
Query: 3 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 182
D + ++DNEAIYDICRR+L IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTN
Sbjct: 199 DVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN 258
Query: 183 LVPYPRIHFPLVTYAPVISAEKAYMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCC 362
LVPYPRIHF L +YAPVISAEKA+ A P + P ++A C
Sbjct: 259 LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP-RHGKYMACCL 317
Query: 363 TVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPW-CPEATGPRFNVXXXX 539
++ + + + P PP P +
Sbjct: 318 MYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCM 377
Query: 540 XXXXXXXXKLGARLDHKFRLMYAKAWLFVALVWSGDGMEAG 662
++ +R+DHKF LMYAK FV + G+GME G
Sbjct: 378 ISNSTSVAEVFSRIDHKFDLMYAKR-AFVHW-YVGEGMEEG 416
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 207 bits (505), Expect = 6e-54
Identities = 89/107 (83%), Positives = 99/107 (92%)
Frame = +2
Query: 245 EGLHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKR 424
+ HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKR
Sbjct: 280 KAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339
Query: 425 TIQFVDWCPTGFKVGINYQPPTVVPGGDWAKVQRAVCMLSNTTAIAE 565
TIQFVDWCPTGFK GINYQPPTVVPGGD AKVQRAVCM+SN+T++AE
Sbjct: 340 TIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAE 386
Score = 150 bits (364), Expect = 8e-37
Identities = 67/84 (79%), Positives = 79/84 (94%)
Frame = +3
Query: 3 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 182
D + ++DNEAIYDICRR+L+IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTN
Sbjct: 199 DVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN 258
Query: 183 LVPYPRIHFPLVTYAPVISAEKAY 254
LVPYPRIHF L +YAPVISAEKA+
Sbjct: 259 LVPYPRIHFMLSSYAPVISAEKAF 282
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 206 bits (503), Expect = 1e-53
Identities = 89/106 (83%), Positives = 97/106 (91%)
Frame = +2
Query: 254 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 433
HEQLSV EITNA FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+Q
Sbjct: 283 HEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQ 342
Query: 434 FVDWCPTGFKVGINYQPPTVVPGGDWAKVQRAVCMLSNTTAIAEAW 571
FVDWCPTGFK GINYQPPTVVPGGD AKVQRAVCM+SN TA+AE +
Sbjct: 343 FVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVF 388
Score = 158 bits (384), Expect = 3e-39
Identities = 95/221 (42%), Positives = 118/221 (53%), Gaps = 1/221 (0%)
Frame = +3
Query: 3 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 182
D A ++DNEAIYDICRR+LDIERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTN
Sbjct: 199 DVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTN 258
Query: 183 LVPYPRIHFPLVTYAPVISAEKAYMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCC 362
LVPYPRIHF L +YAPVISA KAY P P + P ++A C
Sbjct: 259 LVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDP-RHGKYMACCL 317
Query: 363 TVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPW-CPEATGPRFNVXXXX 539
++ + + + P PP P +
Sbjct: 318 MYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCM 377
Query: 540 XXXXXXXXKLGARLDHKFRLMYAKAWLFVALVWSGDGMEAG 662
++ +R+DHKF LMYAK FV + G+GME G
Sbjct: 378 ISNNTAVAEVFSRIDHKFDLMYAKR-AFVHW-YVGEGMEEG 416
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 206 bits (503), Expect = 1e-53
Identities = 89/106 (83%), Positives = 97/106 (91%)
Frame = +2
Query: 254 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 433
HEQLSV EITNA FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+Q
Sbjct: 283 HEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQ 342
Query: 434 FVDWCPTGFKVGINYQPPTVVPGGDWAKVQRAVCMLSNTTAIAEAW 571
FVDWCPTGFK GINYQPPTVVPGGD AKVQRAVCM+SN TA+AE +
Sbjct: 343 FVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVF 388
Score = 158 bits (384), Expect = 3e-39
Identities = 95/221 (42%), Positives = 118/221 (53%), Gaps = 1/221 (0%)
Frame = +3
Query: 3 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 182
D A ++DNEAIYDICRR+LDIERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTN
Sbjct: 199 DVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTN 258
Query: 183 LVPYPRIHFPLVTYAPVISAEKAYMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCC 362
LVPYPRIHF L +YAPVISA KAY P P + P ++A C
Sbjct: 259 LVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDP-RHGKYMACCL 317
Query: 363 TVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPW-CPEATGPRFNVXXXX 539
++ + + + P PP P +
Sbjct: 318 MYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCM 377
Query: 540 XXXXXXXXKLGARLDHKFRLMYAKAWLFVALVWSGDGMEAG 662
++ +R+DHKF LMYAK FV + G+GME G
Sbjct: 378 ISNNTAVAEVFSRIDHKFDLMYAKR-AFVHW-YVGEGMEEG 416
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 196 bits (479), Expect = 9e-51
Identities = 84/106 (79%), Positives = 93/106 (87%)
Frame = +2
Query: 254 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 433
HEQ SV EIT + FEP+N M KCDPRHGKYMACC++YRGDVVPKDVN A+A IK KRTIQ
Sbjct: 283 HEQFSVPEITTSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQ 342
Query: 434 FVDWCPTGFKVGINYQPPTVVPGGDWAKVQRAVCMLSNTTAIAEAW 571
FVDWCPTGFK GINYQPP+VVPGGD AKVQRAVCM+SN TA+AE +
Sbjct: 343 FVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVF 388
Score = 155 bits (376), Expect = 3e-38
Identities = 92/221 (41%), Positives = 117/221 (52%), Gaps = 1/221 (0%)
Frame = +3
Query: 3 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 182
D ++DNEAIYDICRR+LDIERPTY+NLNRLI Q +SS+T SLRFDGA+NVD+TEFQTN
Sbjct: 199 DVVVLLDNEAIYDICRRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTN 258
Query: 183 LVPYPRIHFPLVTYAPVISAEKAYMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCC 362
LVPYPRIHF L +YAPVIS+ KAY F P T P P ++A C
Sbjct: 259 LVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMMAKCDP-RHGKYMACCL 317
Query: 363 TVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPP-WCPEATGPRFNVXXXX 539
++ + + + P PP P +
Sbjct: 318 MYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCM 377
Query: 540 XXXXXXXXKLGARLDHKFRLMYAKAWLFVALVWSGDGMEAG 662
++ +R+DHKF LMY+K FV + G+GME G
Sbjct: 378 ISNNTAVAEVFSRIDHKFDLMYSKR-AFVHW-YVGEGMEEG 416
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 87.4 bits (207), Expect = 8e-18
Identities = 38/79 (48%), Positives = 54/79 (68%)
Frame = +3
Query: 3 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 182
D ++DNEA+YDIC R L + P++ +LN LI +S +T SLRF G LN DL + N
Sbjct: 198 DECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVN 257
Query: 183 LVPYPRIHFPLVTYAPVIS 239
L+P+PR+HF +V +AP+ S
Sbjct: 258 LIPFPRLHFFMVGFAPLTS 276
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/76 (34%), Positives = 42/76 (55%)
Frame = +2
Query: 263 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 442
L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ I ++ K + FV+
Sbjct: 285 LTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVE 344
Query: 443 WCPTGFKVGINYQPPT 490
W P K + PPT
Sbjct: 345 WIPNNVKSSVCDIPPT 360
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 87.4 bits (207), Expect = 8e-18
Identities = 38/79 (48%), Positives = 54/79 (68%)
Frame = +3
Query: 3 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 182
D ++DNEA+YDIC R L + P++ +LN LI +S +T SLRF G LN DL + N
Sbjct: 198 DECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVN 257
Query: 183 LVPYPRIHFPLVTYAPVIS 239
L+P+PR+HF +V +AP+ S
Sbjct: 258 LIPFPRLHFFMVGFAPLTS 276
Score = 61.7 bits (143), Expect = 5e-10
Identities = 26/75 (34%), Positives = 41/75 (54%)
Frame = +2
Query: 263 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 442
L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ I I+ K + FV+
Sbjct: 285 LTVPELTQQMWDSKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVE 344
Query: 443 WCPTGFKVGINYQPP 487
W P K + PP
Sbjct: 345 WIPNNVKSSVCDIPP 359
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 87.0 bits (206), Expect = 1e-17
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +3
Query: 3 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 182
D ++DNEA+YDIC R L + PT+ +LN LI +S +T LRF G LN DL + N
Sbjct: 197 DECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256
Query: 183 LVPYPRIHFPLVTYAPVIS 239
L+P+PR+HF +V +AP+ S
Sbjct: 257 LIPFPRLHFFMVGFAPLTS 275
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/104 (29%), Positives = 53/104 (50%)
Frame = +2
Query: 254 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 433
+ LSV E+T ++ N M DPRHG+Y+ ++RG + K+V+ + I+ K +
Sbjct: 281 YSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSY 340
Query: 434 FVDWCPTGFKVGINYQPPTVVPGGDWAKVQRAVCMLSNTTAIAE 565
FV+W P K + + P G ++ A + N+T+I E
Sbjct: 341 FVEWIPNNVKSSV----CDIAPKG----LKMASTFIGNSTSIQE 376
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 87.0 bits (206), Expect = 1e-17
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +3
Query: 3 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 182
D ++DNEA+YDIC R L + PT+ +LN LI +S +T LRF G LN DL + N
Sbjct: 197 DECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256
Query: 183 LVPYPRIHFPLVTYAPVIS 239
L+P+PR+HF +V +AP+ S
Sbjct: 257 LIPFPRLHFFMVGFAPLTS 275
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/79 (31%), Positives = 42/79 (53%)
Frame = +2
Query: 254 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 433
+ LSV E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 281 YSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSY 340
Query: 434 FVDWCPTGFKVGINYQPPT 490
FV+W P K + PT
Sbjct: 341 FVEWIPNNVKSSVCDIAPT 359
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 85.8 bits (203), Expect = 2e-17
Identities = 39/91 (42%), Positives = 55/91 (60%)
Frame = +3
Query: 3 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 182
D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + N
Sbjct: 197 DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256
Query: 183 LVPYPRIHFPLVTYAPVISAEKAYMNSFPSP 275
L+P+PR+HF +V +AP+ S S P
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYRSLTVP 287
Score = 61.7 bits (143), Expect = 5e-10
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = +2
Query: 254 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 433
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 281 YRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSY 340
Query: 434 FVDWCPTGFKVGINYQPPT 490
FV+W P K + PPT
Sbjct: 341 FVEWIPNNVKSTVCDIPPT 359
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 85.8 bits (203), Expect = 2e-17
Identities = 39/91 (42%), Positives = 55/91 (60%)
Frame = +3
Query: 3 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 182
D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + N
Sbjct: 197 DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256
Query: 183 LVPYPRIHFPLVTYAPVISAEKAYMNSFPSP 275
L+P+PR+HF +V +AP+ S S P
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYRSLTVP 287
Score = 61.7 bits (143), Expect = 5e-10
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = +2
Query: 254 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 433
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 281 YRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSY 340
Query: 434 FVDWCPTGFKVGINYQPPT 490
FV+W P K + PPT
Sbjct: 341 FVEWIPNNVKSTVCDIPPT 359
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 85.8 bits (203), Expect = 2e-17
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +3
Query: 3 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 182
D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + N
Sbjct: 197 DECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256
Query: 183 LVPYPRIHFPLVTYAPVIS-AEKAYMN 260
L+P+PR+HF +V +AP+ S + Y N
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYRN 283
Score = 61.7 bits (143), Expect = 5e-10
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = +2
Query: 254 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 433
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 281 YRNLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSY 340
Query: 434 FVDWCPTGFKVGINYQPPT 490
FV+W P K + PPT
Sbjct: 341 FVEWIPNNVKSTVCDIPPT 359
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 85.0 bits (201), Expect = 4e-17
Identities = 37/79 (46%), Positives = 53/79 (67%)
Frame = +3
Query: 3 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 182
D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + N
Sbjct: 197 DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256
Query: 183 LVPYPRIHFPLVTYAPVIS 239
L+P+PR+HF +V +AP+ S
Sbjct: 257 LIPFPRLHFFMVGFAPLTS 275
Score = 61.3 bits (142), Expect = 6e-10
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = +2
Query: 254 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 433
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 281 YRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY 340
Query: 434 FVDWCPTGFKVGINYQPPT 490
FV+W P K + PPT
Sbjct: 341 FVEWIPNNVKSTVCDIPPT 359
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 85.0 bits (201), Expect = 4e-17
Identities = 37/79 (46%), Positives = 53/79 (67%)
Frame = +3
Query: 3 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 182
D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + N
Sbjct: 197 DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256
Query: 183 LVPYPRIHFPLVTYAPVIS 239
L+P+PR+HF +V +AP+ S
Sbjct: 257 LIPFPRLHFFMVGFAPLTS 275
Score = 58.0 bits (134), Expect = 6e-09
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +2
Query: 254 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 433
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 281 YRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY 340
Query: 434 FVDWCPTGFKVGI 472
FV+W P K +
Sbjct: 341 FVEWIPNNVKSSV 353
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 64.1 bits (149), Expect = 9e-11
Identities = 28/83 (33%), Positives = 45/83 (54%)
Frame = +3
Query: 3 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 182
DC ++DN A+ I L + PT+ N L+ ++S+ T +LR+ G +N DL +
Sbjct: 200 DCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLAS 259
Query: 183 LVPYPRIHFPLVTYAPVISAEKA 251
L+P PR HF + Y P+ +A
Sbjct: 260 LIPTPRCHFLMTGYTPLTVERQA 282
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/113 (23%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Frame = +2
Query: 182 LGALPPYP----LPTGHVRASHLCREGLHEQLSVAEITNACFEPANQMVKCDPRH----- 334
L +L P P L TG+ + + + + +V ++ + N MV R+
Sbjct: 257 LASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQ 316
Query: 335 GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 493
KY++ + +G+V P V+ ++ I+ ++ + F+DW P +V ++ + P V
Sbjct: 317 AKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYV 369
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/83 (33%), Positives = 45/83 (54%)
Frame = +3
Query: 3 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 182
DC ++DN A+ I L + PT+ N L+ ++S+ T +LR+ G +N DL +
Sbjct: 200 DCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLAS 259
Query: 183 LVPYPRIHFPLVTYAPVISAEKA 251
L+P PR HF + Y P+ +A
Sbjct: 260 LIPTPRCHFLMTGYTPLTVERQA 282
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/113 (22%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Frame = +2
Query: 182 LGALPPYP----LPTGHVRASHLCREGLHEQLSVAEITNACFEPANQMVKCDPRH----- 334
L +L P P L TG+ + + + + +V ++ + N MV R+
Sbjct: 257 LASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQ 316
Query: 335 GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 493
KY++ + +G+V P V+ ++ I+ ++ + F++W P +V ++ + P V
Sbjct: 317 AKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYV 369
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 35.5 bits (78), Expect = 0.035
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +2
Query: 116 LDHCFFEIRRRSECGPHRVPD*LGALPPYPLPTGHVRASHLCREG 250
L C RRR GP RV + L PP P+ + V + L REG
Sbjct: 97 LQRCIIARRRRDRVGPVRVENTLPPYPPPPMTSAAVTTTTLAREG 141
>At3g62210.1 68416.m06989 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 279
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 400 GRVHILGY-DVTTVQHTASHVLAMTGVAFHHLVGGLE 293
GRV I Y D + + H H L TG+ HH+ G++
Sbjct: 59 GRVSISAYGDTSGIPHVIQHALNSTGIELHHVPAGVK 95
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 481 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 377
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/85 (25%), Positives = 36/85 (42%)
Frame = +3
Query: 237 SAEKAYMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSK 416
+A K++ S P S+ S PP + P+ S + S P + + PS+
Sbjct: 508 AASKSFPISQPPTTSKPFVSQPPN---TSKPMPVSQPPTTSKPLPVSQPPPTFQSTCPSQ 564
Query: 417 PSVLSNSSTGVQPVSRSVSTTSHPP 491
P S+S + + PV S + PP
Sbjct: 565 PPAASSSLSPLPPVFNSTQSFQSPP 589
>At5g64430.1 68418.m08093 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile PF00564:
PB1 domain
Length = 513
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 195 PRIHFPLVTYAPVISAEKAYMNSFPSPRSQTHASSPP 305
P + FP T+ + + YM PSP HA PP
Sbjct: 323 PGVVFPTTTHGLGLPEQPVYMIPSPSPSPVYHAPPPP 359
>At5g45330.1 68418.m05564 expressed protein ; expression supported
by MPSS
Length = 571
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 213 LVTYAPVISAEKAYMNSFPSPRSQTHASSPP 305
+VT +P +S+ ++Y +S PSP QT +PP
Sbjct: 260 VVTRSPDVSSNQSY-SSNPSPLGQTQLHTPP 289
>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 587
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 365 RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 508
+G V D A T TK+ + DW P+ FK PP ++P D
Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 439 DELDSTLGFDGSDGRVHILGYDVTTVQ 359
D + +GFD R+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
>At3g03060.1 68416.m00302 AAA-type ATPase family protein contains a
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 639
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = -3
Query: 340 LAMTGVAFHHLVGGLEACVCDLGDGKLFM*AFSAEMTGAYVTSGKWIRG*GTKLVWNSVR 161
+A F H+ GGL A + D + + +A G Y T G K++W+ V
Sbjct: 271 VAAINTTFDHIGGGLRAILTDQNKLIVAVGGVTALAAGIYTTRE------GAKVIWSYVD 324
Query: 160 STFRAPSNLKEA 125
PS ++E+
Sbjct: 325 RILGQPSLIRES 336
>At1g29410.2 68414.m03599 phosphoribosylanthranilate isomerase,
putative strong similarity to GI:619749 from
[Arabidopsis thaliana] (Plant Cell 7 (4), 447-461
(1995))
Length = 244
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = -3
Query: 523 LNLGPVASGHHGGWLVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGYDVTTVQHT 353
LN+ P GH W++VD+ TG +D+L S + + Y +T V T
Sbjct: 178 LNVVPEEDGHLADWILVDS--ATGGRYLDQLLSFFALSHCNVFLRGTSYTITLVHET 232
>At5g19820.1 68418.m02355 PBS lyase HEAT-like repeat-containing
protein contains Pfam profile: PF03130 PBS lyase
HEAT-like repeat
Length = 1116
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 231 VISAEKAYMNSFPSPRSQTHASSPPTRW-*NATPVMASTWL 350
V+ A A M+ F +PR Q HA+S + N TP + S +L
Sbjct: 462 VLPALAAAMDDFQNPRVQAHAASAVLNFSENCTPEILSPYL 502
>At2g19390.1 68415.m02262 expressed protein
Length = 1211
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 698 PRSWTGLSGETSPGLHTVTGPYQ 630
PRS +GL + SPGLH P +
Sbjct: 402 PRSGSGLPPKLSPGLHNTPSPIE 424
>At1g34580.1 68414.m04298 monosaccharide transporter, putative
similar to monosaccharide transporter 3 [Oryza sativa]
GI:11991114, monosaccharide transporter [Nicotiana
tabacum] GI:19885, monosaccharide transporter 1 [Oryza
sativa] GI:11991110; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 506
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 571 GLALTTSFDSCTPKRGFSWHWYGPVTVWRPGEVSP 675
G A+T C GF W W GP++ P E+ P
Sbjct: 387 GYAVTVVVLLCIYAAGFGWSW-GPLSWLVPSEIFP 420
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,032,295
Number of Sequences: 28952
Number of extensions: 414250
Number of successful extensions: 1366
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1366
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1526202912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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