Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30497
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   2.5  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   2.5  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   2.5  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   2.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   5.7  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 176 SKGVQYLNEIKDSVVAGFQ 232
           SK ++Y+N + D  VAGF+
Sbjct: 183 SKIIEYMNHLVDLGVAGFR 201


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 176 SKGVQYLNEIKDSVVAGFQ 232
           SK ++Y+N + D  VAGF+
Sbjct: 184 SKIIEYMNHLVDLGVAGFR 202


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 176 SKGVQYLNEIKDSVVAGFQ 232
           SK ++Y+N + D  VAGF+
Sbjct: 184 SKIIEYMNHLVDLGVAGFR 202


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/11 (72%), Positives = 11/11 (100%)
 Frame = +3

Query: 675 FQNQTLTKLYK 707
           FQN++LT+LYK
Sbjct: 402 FQNESLTRLYK 412


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 538 RPFTMNMGVPPPGTLRKRDHDVCSAHRRYHPQLLQ 434
           RP+++  G PP G L   + +V     + +  LL+
Sbjct: 355 RPWSLYCGEPPCGQLNPDNPNVYEILEKLYKDLLE 389


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,551
Number of Sequences: 336
Number of extensions: 4991
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)