Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30496
         (563 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z19153-4|CAA79548.1|  525|Caenorhabditis elegans Hypothetical pr...    32   0.25 
L12018-2|AAK68341.1|  525|Caenorhabditis elegans G protein regul...    31   0.76 
U23452-8|AAR12973.1|  231|Caenorhabditis elegans Hypothetical pr...    29   2.3  
U23452-7|AAR12972.1|  366|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z75711-8|CAJ43907.1|  118|Caenorhabditis elegans Hypothetical pr...    27   9.3  
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr...    27   9.3  
AL132949-22|CAB70112.2|  603|Caenorhabditis elegans Hypothetical...    27   9.3  
AL132864-1|CAB63392.1|  613|Caenorhabditis elegans Hypothetical ...    27   9.3  

>Z19153-4|CAA79548.1|  525|Caenorhabditis elegans Hypothetical
           protein C38C10.4 protein.
          Length = 525

 Score = 32.3 bits (70), Expect = 0.25
 Identities = 18/55 (32%), Positives = 31/55 (56%)
 Frame = -1

Query: 284 EESLSVARIGMFKSIITVSRITVIAICWSVIPRRRPCIFFTKLGCILTITGAAFK 120
           E  +S+ ++G+ + I  V  +  IA C   + +RR   +F  LG +LTI  ++FK
Sbjct: 291 EALVSIRKLGLNEHIGDV--LLTIAKCLIALGKRRQAAYFIILGSVLTINQSSFK 343


>L12018-2|AAK68341.1|  525|Caenorhabditis elegans G protein
           regulator protein 1 protein.
          Length = 525

 Score = 30.7 bits (66), Expect = 0.76
 Identities = 18/55 (32%), Positives = 30/55 (54%)
 Frame = -1

Query: 284 EESLSVARIGMFKSIITVSRITVIAICWSVIPRRRPCIFFTKLGCILTITGAAFK 120
           E  +S+ ++G+ + I  V  +  IA C   + +RR   +F  LG +LTI   +FK
Sbjct: 291 EALVSIRKLGLNEYIGDV--LLTIAKCLIALGKRRQAAYFIILGSVLTINQNSFK 343


>U23452-8|AAR12973.1|  231|Caenorhabditis elegans Hypothetical
           protein R07G3.7b protein.
          Length = 231

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -3

Query: 144 DYNWGCLQRSEYLT*AYTTARHQMVHDFLEHYRNYFVHHLPMLHD 10
           DYN G   R+  L   Y   RH   H F + Y++   HH P+  D
Sbjct: 107 DYNDGKCNRA--LPEYYYVQRHDRTHMFDKRYKHSVQHHKPIKRD 149


>U23452-7|AAR12972.1|  366|Caenorhabditis elegans Hypothetical
           protein R07G3.7a protein.
          Length = 366

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -3

Query: 144 DYNWGCLQRSEYLT*AYTTARHQMVHDFLEHYRNYFVHHLPMLHD 10
           DYN G   R+  L   Y   RH   H F + Y++   HH P+  D
Sbjct: 242 DYNDGKCNRA--LPEYYYVQRHDRTHMFDKRYKHSVQHHKPIKRD 284


>Z75711-8|CAJ43907.1|  118|Caenorhabditis elegans Hypothetical
           protein K02B12.9 protein.
          Length = 118

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
 Frame = +3

Query: 3   HNSHE----ASEDGVQNNSY--NVQENHEPSDGGQSYRPTSNIHSFEGSPSY 140
           H+S+E    +  D    N Y  + Q +H+P  GG  Y      + + GS +Y
Sbjct: 63  HDSYEPKYNSGHDQKSGNDYYSSYQPSHQPYYGGSYYNEQPKYNDYHGSQNY 114


>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical
           protein F40F12.5 protein.
          Length = 1144

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 16/64 (25%), Positives = 23/64 (35%)
 Frame = +3

Query: 6   NSHEASEDGVQNNSYNVQENHEPSDGGQSYRPTSNIHSFEGSPSYSQDAAQFSEEYAGTP 185
           NS          N+Y+      P     +Y   SN HS + S S S    Q ++     P
Sbjct: 385 NSRSMKPSEPDYNTYSTHPPRPPPSSSMNYPSMSNTHSLQPSRSKSVQTIQRNQFVRQNP 444

Query: 186 SGYN 197
           +  N
Sbjct: 445 AERN 448


>AL132949-22|CAB70112.2|  603|Caenorhabditis elegans Hypothetical
           protein Y53F4B.25 protein.
          Length = 603

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 30  GVQNNSYNVQENHEPSDGGQSYRPTSNIHSF 122
           GVQ   Y  Q+N +P+    ++R   + H F
Sbjct: 302 GVQQPPYQFQQNFQPAQSADAHRQPMHHHGF 332


>AL132864-1|CAB63392.1|  613|Caenorhabditis elegans Hypothetical
           protein Y53H1A.1 protein.
          Length = 613

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = +3

Query: 72  PSDGGQSYRPTSNIHSFEGSPSYSQDAAQFSEEYAGTPSGY-NAP 203
           PS  G   RP   +H F+ SPS   D  Q   +    P  Y N+P
Sbjct: 193 PSFFGAPQRPPPQLHFFQESPSVQHDFQQPDFQPDFQPENYQNSP 237


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,558,885
Number of Sequences: 27780
Number of extensions: 258840
Number of successful extensions: 738
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)