Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30495
(814 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242; Eukary... 152 9e-36
UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA - ... 144 2e-33
UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa pro... 138 2e-31
UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23; Fungi... 131 2e-29
UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1; Echinoco... 130 4e-29
UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11; Ascom... 128 2e-28
UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19; Magno... 124 4e-27
UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6; Eukaryo... 117 4e-25
UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=1... 113 4e-24
UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lambl... 110 5e-23
UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40 ribo... 109 8e-23
UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin re... 105 1e-21
UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1; ... 104 3e-21
UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, who... 103 5e-21
UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7; Trich... 98 3e-19
UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole geno... 96 1e-18
UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n... 91 2e-17
UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13; Archae... 91 4e-17
UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:... 90 5e-17
UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1; E... 88 3e-16
UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2; Thermop... 87 5e-16
UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 84 5e-15
UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillar... 83 1e-14
UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila melanogaster|... 81 3e-14
UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1; ... 76 9e-13
UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 73 1e-11
UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa... 71 3e-11
UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12; Euryar... 71 3e-11
UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga m... 71 5e-11
UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2; Thermoprotei... 68 2e-10
UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S riboso... 63 7e-09
UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD l... 61 4e-08
UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella nat... 54 3e-06
UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:... 54 3e-06
UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n... 52 2e-05
UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal ... 51 4e-05
UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4; Mycoplas... 45 0.002
UniRef50_A6YEB6 Cluster: Ribosomal protein S2; n=1; Chlorokybus ... 44 0.003
UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep... 44 0.006
UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep: L... 42 0.018
UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4; Mollicut... 42 0.024
UniRef50_Q9TCC3 Cluster: Ribosomal protein S2; n=1; Nephroselmis... 41 0.043
UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplas... 40 0.075
UniRef50_Q4P627 Cluster: Putative uncharacterized protein; n=1; ... 39 0.13
UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3; Firmicut... 39 0.13
UniRef50_UPI00005A3143 Cluster: PREDICTED: similar to 40S riboso... 38 0.23
UniRef50_A5BFJ2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.23
UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;... 38 0.30
UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma p... 38 0.40
UniRef50_Q9ZE61 Cluster: 30S ribosomal protein S2; n=10; Rickett... 38 0.40
UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7; Bacteria... 38 0.40
UniRef50_O27614 Cluster: Putative uncharacterized protein; n=1; ... 37 0.53
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 36 0.92
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.92
UniRef50_UPI00015A41A9 Cluster: UPI00015A41A9 related cluster; n... 36 1.2
UniRef50_Q8ZTA0 Cluster: Putative uncharacterized protein PAE335... 36 1.2
UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellul... 36 1.6
UniRef50_A6GAK0 Cluster: Ribosomal protein S2; n=2; Deltaproteob... 35 2.8
UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondri... 35 2.8
UniRef50_Q88VJ4 Cluster: 30S ribosomal protein S2; n=5; Bacteria... 34 3.7
UniRef50_Q9TM33 Cluster: Chloroplast 30S ribosomal protein S2; n... 34 3.7
UniRef50_Q9KEH3 Cluster: BH0879 protein; n=1; Bacillus haloduran... 34 4.9
UniRef50_Q5JJZ8 Cluster: Putative uncharacterized protein B1166B... 34 4.9
UniRef50_O84687 Cluster: 30S ribosomal protein S2; n=32; Chlamyd... 34 4.9
UniRef50_A6RSL3 Cluster: Putative uncharacterized protein; n=2; ... 31 5.2
UniRef50_UPI0000E80FC9 Cluster: PREDICTED: hypothetical protein;... 33 6.5
UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of s... 33 6.5
UniRef50_Q9GCB9 Cluster: Mitochondrial ribosomal protein S2; n=3... 33 6.5
UniRef50_Q7UKH4 Cluster: 30S ribosomal protein S2; n=3; Planctom... 33 6.5
UniRef50_Q9Y4B5-3 Cluster: Isoform 3 of Q9Y4B5 ; n=10; Amniota|R... 33 8.6
UniRef50_Q2GCI4 Cluster: Ribosomal protein S2; n=1; Neorickettsi... 33 8.6
UniRef50_Q9M1H1 Cluster: Putative uncharacterized protein T14E10... 33 8.6
UniRef50_Q53PN1 Cluster: Expressed protein; n=3; Oryza sativa|Re... 33 8.6
>UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242;
Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens
(Human)
Length = 295
Score = 152 bits (369), Expect = 9e-36
Identities = 72/85 (84%), Positives = 76/85 (89%)
Frame = +2
Query: 254 DPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 433
+PADV VISSR GQRAVLKFAA TGATPIAGRFTPG FTNQIQAAFREPRLL+V DP
Sbjct: 70 NPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRA 129
Query: 434 DHQPITEASYVNIPVIALCNTDSPL 508
DHQP+TEASYVN+P IALCNTDSPL
Sbjct: 130 DHQPLTEASYVNLPTIALCNTDSPL 154
Score = 110 bits (264), Expect = 5e-23
Identities = 49/71 (69%), Positives = 60/71 (84%)
Frame = +3
Query: 48 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 227
MSG LDVL + EEDV K LAA THLG N++FQME Y+YKR++DG ++INL+RTWEKL+L
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 228 AARAVVAIETP 260
AARA+VAIE P
Sbjct: 61 AARAIVAIENP 71
Score = 53.2 bits (122), Expect = 7e-06
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +1
Query: 502 PTRFVDIAIPCNTKSSHSIGLMWWVVGT*SVEGFRGVLS 618
P R+VDIAIPCN K +HS+GLMWW++ V RG +S
Sbjct: 153 PLRYVDIAIPCNNKGAHSVGLMWWMLAR-EVLRMRGTIS 190
>UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA -
Suberites domuncula (Sponge)
Length = 325
Score = 144 bits (349), Expect = 2e-33
Identities = 66/85 (77%), Positives = 75/85 (88%)
Frame = +2
Query: 254 DPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 433
+PADV V++++PFGQRA+LKFA +TGA PIAGRFTPG FTNQIQ AFREPRLLIV D
Sbjct: 70 NPADVCVLANKPFGQRAILKFAHYTGAFPIAGRFTPGTFTNQIQKAFREPRLLIVSDARS 129
Query: 434 DHQPITEASYVNIPVIALCNTDSPL 508
DHQPITEA+YVNIPVIA CNT+SPL
Sbjct: 130 DHQPITEAAYVNIPVIAFCNTNSPL 154
Score = 100 bits (239), Expect = 5e-20
Identities = 44/71 (61%), Positives = 57/71 (80%)
Frame = +3
Query: 48 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 227
MSGGL+VL++ E+DVTK+LAA THLG NV+ QM YV+K + DG +IN+R+TWEKL+L
Sbjct: 1 MSGGLEVLSMKEDDVTKLLAAGTHLGDSNVDIQMAQYVFKTKGDGVPIINVRKTWEKLLL 60
Query: 228 AARAVVAIETP 260
AAR + AIE P
Sbjct: 61 AARVIAAIENP 71
Score = 45.6 bits (103), Expect = 0.002
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +1
Query: 484 FVQHRLPTRFVDIAIPCNTKSSHSIGLMWWVVGT*SVEGFRGVLS 618
F P R++D+AIPCN +S+GLMWW++ V RG +S
Sbjct: 147 FCNTNSPLRYIDVAIPCNNMGKNSLGLMWWLLCR-EVLRLRGTIS 190
>UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa
protein; n=4; Eutheria|Rep: PREDICTED: similar to 33 kDa
protein - Pan troglodytes
Length = 355
Score = 138 bits (334), Expect = 2e-31
Identities = 67/83 (80%), Positives = 71/83 (85%)
Frame = +2
Query: 260 ADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDH 439
ADV VISSR GQRAVLKFAA TGATPIAG FTPG FT+QIQAAFREPRL +V DP DH
Sbjct: 152 ADVSVISSRNTGQRAVLKFAAATGATPIAGCFTPGTFTSQIQAAFREPRLPVVTDPRVDH 211
Query: 440 QPITEASYVNIPVIALCNTDSPL 508
QP+ EASYVN+P IALCNTDSPL
Sbjct: 212 QPLMEASYVNLPTIALCNTDSPL 234
Score = 47.2 bits (107), Expect = 5e-04
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = +1
Query: 502 PTRFVDIAIPCNTKSSHSIGLMWWVV 579
P +VDIAIPCN K +HS+G+MWW++
Sbjct: 233 PLCYVDIAIPCNNKGAHSVGVMWWML 258
Score = 40.7 bits (91), Expect = 0.043
Identities = 37/113 (32%), Positives = 47/113 (41%)
Frame = +3
Query: 33 QISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTW 212
Q + TM G DVL +NEEDV K LAA TH +E + VI+ R T
Sbjct: 106 QETFTMFGAPDVLQMNEEDVLKFLAARTH--SEKLLLAARAIAAIENLADVSVISSRNTG 163
Query: 213 EKLVLAARAVVAIETPLMCSSSHHGPSVSVLY*SLPRTPVLRLLRGVSHQVLL 371
++ VL A C + S PR PV+ R V HQ L+
Sbjct: 164 QRAVLKFAAATGATPIAGCFTPGTFTSQIQAAFREPRLPVVTDPR-VDHQPLM 215
>UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23;
Fungi/Metazoa group|Rep: 40S ribosomal protein S0-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 252
Score = 131 bits (317), Expect = 2e-29
Identities = 70/115 (60%), Positives = 80/115 (69%)
Frame = +2
Query: 254 DPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 433
+P DV ISSR FGQRAVLKFAAHTGATPIAGRFTPG+FTN I +F+EPRL+IV DP
Sbjct: 69 NPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRS 128
Query: 434 DHQPITEASYVNIPVIALCNTDSPLDLWTLLSHATPSLPTLLV*CGGLLAREVLK 598
D Q I EASYVNIPVIAL + DSP + + + LLAREVL+
Sbjct: 129 DAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLR 183
Score = 78.2 bits (184), Expect = 2e-13
Identities = 36/62 (58%), Positives = 41/62 (66%)
Frame = +3
Query: 75 LNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIE 254
L ED +LAA THLGA NV E YV+ R DG HVIN+ +TWEKLVLAAR + AI
Sbjct: 9 LTPEDAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIP 68
Query: 255 TP 260
P
Sbjct: 69 NP 70
>UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1;
Echinococcus granulosus|Rep: 40S ribosomal protein SA -
Echinococcus granulosus
Length = 268
Score = 130 bits (314), Expect = 4e-29
Identities = 77/163 (47%), Positives = 102/163 (62%), Gaps = 5/163 (3%)
Frame = +2
Query: 254 DPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 433
+PADV +I +P QR LKF +TG T + GRFTPGAFTNQIQ+ F+EPRLLIV DP
Sbjct: 70 NPADVVIIGGQPTWQRGALKFGHYTGTTSVPGRFTPGAFTNQIQSGFKEPRLLIVCDPKG 129
Query: 434 DHQPITEASYVNIPVIALCNTDSPL---DLWTLLSHATPSLPTLLV*CGGLLAREVLKAF 604
DHQP+ E S VNIPVI CNTDSPL D+ ++ S+ +L +LAREV + +
Sbjct: 130 DHQPVREGSAVNIPVIGFCNTDSPLQCVDIGIPCNNDKYSIALML----WMLAREVRRIW 185
Query: 605 VVCFPREQALGMLWVELVLLT--VNPGKKSQKGLNQQSPREQG 727
+ PR Q G + ++L L+ V+ + +G Q+ P EQG
Sbjct: 186 GL-DPRSQP-GDVIMDLFLMREHVDEPPEGPEGEAQEPPFEQG 226
Score = 95.1 bits (226), Expect = 2e-18
Identities = 40/71 (56%), Positives = 54/71 (76%)
Frame = +3
Query: 48 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 227
MSGG++ L L E+D+ M+AA HLG+ N N+QM+ YVY R +G H+I+L +TWEKL+L
Sbjct: 1 MSGGIEALELKEDDIRLMVAAKVHLGSTNANYQMQQYVYDRNDEGNHIIHLNKTWEKLLL 60
Query: 228 AARAVVAIETP 260
AARA+ AIE P
Sbjct: 61 AARAICAIENP 71
>UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11;
Ascomycota|Rep: 40S ribosomal protein S0-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 292
Score = 128 bits (309), Expect = 2e-28
Identities = 63/100 (63%), Positives = 76/100 (76%)
Frame = +2
Query: 254 DPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 433
+PADV V+S+R +G RAVLKFAAHTGAT IAGRFTPG FTN I +REPRL++V DP
Sbjct: 72 NPADVCVVSTRTYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLIVVTDPRA 131
Query: 434 DHQPITEASYVNIPVIALCNTDSPLDLWTLLSHATPSLPT 553
D Q I EAS+VNIPVIALC+TDS +L+H ++PT
Sbjct: 132 DAQAIKEASFVNIPVIALCDTDS------ILNHVDIAIPT 165
Score = 85.0 bits (201), Expect = 2e-15
Identities = 34/69 (49%), Positives = 52/69 (75%)
Frame = +3
Query: 54 GGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAA 233
G ++L +ED+ ++LAA H+G++N+ +M+ YV+KRR+DG H++NL +TWEKLVLAA
Sbjct: 5 GRPNILNATDEDIKQLLAANCHIGSKNLEVRMDNYVWKRRSDGVHILNLGKTWEKLVLAA 64
Query: 234 RAVVAIETP 260
R + IE P
Sbjct: 65 RVIATIENP 73
Score = 34.7 bits (76), Expect = 2.8
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1
Query: 514 VDIAIPCNTKSSHSIGLMWWVVGT*SVEGFRGVLS 618
VDIAIP N K SIGL+W+++ V RG LS
Sbjct: 159 VDIAIPTNNKGRKSIGLIWYLLAR-EVLRVRGTLS 192
>UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19;
Magnoliophyta|Rep: 40S ribosomal protein Sa-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 298
Score = 124 bits (298), Expect = 4e-27
Identities = 55/85 (64%), Positives = 67/85 (78%)
Frame = +2
Query: 254 DPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 433
+P D+ V S+RP+GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F EPRLLI+ DP
Sbjct: 74 NPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRT 133
Query: 434 DHQPITEASYVNIPVIALCNTDSPL 508
DHQPI E + NIP+IA C+TDSP+
Sbjct: 134 DHQPIKEGALGNIPIIAFCDTDSPM 158
Score = 83.0 bits (196), Expect = 8e-15
Identities = 37/64 (57%), Positives = 46/64 (71%)
Frame = +3
Query: 69 LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVA 248
L+ E DV M AA HLG +N N+QME YV+KRR DG ++ NL +TWEKL +AAR +VA
Sbjct: 12 LSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVA 71
Query: 249 IETP 260
IE P
Sbjct: 72 IENP 75
Score = 40.3 bits (90), Expect = 0.056
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +1
Query: 502 PTRFVDIAIPCNTKSSHSIGLMWWVV 579
P RFVDI IP N K HSIG ++W++
Sbjct: 157 PMRFVDIGIPANNKGKHSIGCLFWLL 182
>UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6;
Eukaryota|Rep: B1056G08.113 gene product - Ostreococcus
tauri
Length = 313
Score = 117 bits (281), Expect = 4e-25
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = +2
Query: 254 DPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 433
+P DV ++RP+GQRAVLKFA +TGA +AGR TPG +TNQ A F EPR+L+V DP
Sbjct: 93 NPQDVIAQAARPYGQRAVLKFAQYTGAKALAGRHTPGTYTNQKDAVFAEPRVLVVTDPRT 152
Query: 434 DHQPITEASYVNIPVIALCNTDSPL 508
D QPI+E ++VNIP IA C+TDSPL
Sbjct: 153 DAQPISETAFVNIPTIAFCDTDSPL 177
Score = 91.1 bits (216), Expect = 3e-17
Identities = 39/64 (60%), Positives = 51/64 (79%)
Frame = +3
Query: 69 LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVA 248
++ E D+ MLAA HLG +NV+FQME YV+KRRADG H+INL +TW+KL+LAAR +VA
Sbjct: 31 MSQKEADIAMMLAAGCHLGTKNVDFQMERYVWKRRADGIHIINLGKTWDKLMLAARVIVA 90
Query: 249 IETP 260
+E P
Sbjct: 91 VENP 94
Score = 35.1 bits (77), Expect = 2.1
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 502 PTRFVDIAIPCNTKSSHSIGLMWWVVGT*SVEGFRGVLSP 621
P + VDIAIP N K+ SIG +++++ V RG +SP
Sbjct: 176 PLKNVDIAIPANNKAKQSIGCLYYLLAR-MVLQMRGTISP 214
>UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=11;
Apicomplexa|Rep: 40S ribosomal protein SA, putative -
Theileria parva
Length = 274
Score = 113 bits (273), Expect = 4e-24
Identities = 57/114 (50%), Positives = 75/114 (65%)
Frame = +2
Query: 254 DPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 433
+P +V V+S+RP+G RAVLKF+ + G+ PIAGR+ PG TNQI F EPRLL+ DP
Sbjct: 70 NPEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIPGTLTNQITQKFIEPRLLVATDPRT 129
Query: 434 DHQPITEASYVNIPVIALCNTDSPLDLWTLLSHATPSLPTLLV*CGGLLAREVL 595
D Q + E+SYV++PVIALC+TDSPL+ + + LLAREVL
Sbjct: 130 DAQSLRESSYVSLPVIALCDTDSPLNYVDIAIPCNNKGKESIALMYWLLAREVL 183
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/71 (42%), Positives = 42/71 (59%)
Frame = +3
Query: 48 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 227
M+ L +E+ + ML A H+G +NV +M YVY R +G H+INL T EKL +
Sbjct: 1 MAAPTSKLTPDEDSIRMMLTAKVHIGTKNVENKMRKYVYSRTQEGVHLINLAHTLEKLKV 60
Query: 228 AARAVVAIETP 260
AARA+V + P
Sbjct: 61 AARAIVTVSNP 71
>UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_16528_17265 - Giardia lamblia
ATCC 50803
Length = 245
Score = 110 bits (264), Expect = 5e-23
Identities = 56/115 (48%), Positives = 73/115 (63%)
Frame = +2
Query: 254 DPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 433
DPA++ V+++RP QRA+LKF +T AT GRF PG FTN++ + EPRLL+V DP
Sbjct: 75 DPAEIAVVANRPDAQRAILKFCKYTHATAFPGRFIPGNFTNRMNPNYCEPRLLLVNDPVV 134
Query: 434 DHQPITEASYVNIPVIALCNTDSPLDLWTLLSHATPSLPTLLV*CGGLLAREVLK 598
D Q I EASYVNIP I+LCN+D+ L + P + LLAREVL+
Sbjct: 135 DRQAILEASYVNIPTISLCNSDANLKFIDVAIPCNNKTPMSIGLIYWLLAREVLR 189
Score = 74.9 bits (176), Expect = 2e-12
Identities = 32/62 (51%), Positives = 44/62 (70%)
Frame = +3
Query: 75 LNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIE 254
L E DV KML ATTHLG N++ +M+ Y++ R+ DGT V NL++ W K+V AAR +V I+
Sbjct: 15 LKEADVKKMLVATTHLGVRNIDRRMQFYIFDRQKDGTFVFNLQKVWAKIVFAARILVTID 74
Query: 255 TP 260
P
Sbjct: 75 DP 76
>UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40
ribosome associated-like protein; n=7; Trypanosoma|Rep:
Laminin receptor-like protein/ p40 ribosome
associated-like protein - Trypanosoma cruzi
Length = 298
Score = 109 bits (262), Expect = 8e-23
Identities = 57/115 (49%), Positives = 72/115 (62%)
Frame = +2
Query: 254 DPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 433
+P DV V S+R FGQRA+ KF+ G + +AGRF PG FTNQIQ F +PR+L+V DP
Sbjct: 90 NPQDVTVCSTRLFGQRAIFKFSQLVGMSFLAGRFIPGTFTNQIQKKFMQPRVLLVTDPRT 149
Query: 434 DHQPITEASYVNIPVIALCNTDSPLDLWTLLSHATPSLPTLLV*CGGLLAREVLK 598
D Q EAS VNIPVIA C+TD+PL+ + + LLAREVL+
Sbjct: 150 DQQAFREASLVNIPVIAFCDTDAPLEFVDIAIPCNDRRRYSISMMYWLLAREVLR 204
Score = 64.1 bits (149), Expect = 4e-09
Identities = 26/58 (44%), Positives = 40/58 (68%)
Frame = +3
Query: 87 DVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIETP 260
DV K++A H G +N + M+ Y++ R +GT++I+L TWEKL+LAAR + A+E P
Sbjct: 34 DVQKLVAMHCHFGTKNRSNAMKKYIHSRTKEGTNIIDLHMTWEKLILAARVIAAVENP 91
>UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin
receptor; n=3; Entamoeba histolytica|Rep: Ribosomal
protein SA (P40) / laminin receptor - Entamoeba
histolytica
Length = 173
Score = 105 bits (253), Expect = 1e-21
Identities = 46/88 (52%), Positives = 61/88 (69%)
Frame = +2
Query: 245 SHRDPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLD 424
S+ P+DV ++ R RA LKF +TG T +AGRFTPG+FTNQIQ F EPRL+IV D
Sbjct: 78 SNETPSDVVAVAGREMAHRASLKFMKYTGCTAVAGRFTPGSFTNQIQKKFMEPRLIIVSD 137
Query: 425 PAQDHQPITEASYVNIPVIALCNTDSPL 508
P+ DHQ + E+ Y+N+P I N+D+ L
Sbjct: 138 PSVDHQALRESGYINVPTIGFWNSDNRL 165
Score = 69.7 bits (163), Expect = 8e-11
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Frame = +3
Query: 63 DVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAV 242
D+L + ED+ M+A H+GA N+NF ME YVY+R + + NL +TWEKL LAAR +
Sbjct: 15 DILKPSAEDIKMMVACRVHIGATNLNFAMEEYVYERGNNNECIFNLMKTWEKLSLAARVI 74
Query: 243 VAI--ETP 260
I ETP
Sbjct: 75 AGISNETP 82
>UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 280
Score = 104 bits (249), Expect = 3e-21
Identities = 49/91 (53%), Positives = 63/91 (69%)
Frame = +2
Query: 254 DPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 433
+P D+ V S+RP+GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F EPRLLI+ DP
Sbjct: 71 NPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRT 130
Query: 434 DHQPITEASYVNIPVIALCNTDSPLDLWTLL 526
DHQPI E++ P++ P + TL+
Sbjct: 131 DHQPIKESALETSPLLLSVTLILPCAMSTLM 161
Score = 41.5 bits (93), Expect = 0.024
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3
Query: 180 GTHVINLRRTWEKLVLAARAVVAIETP 260
G +INL +TWEKL LAAR +VAIE P
Sbjct: 46 GIFIINLGKTWEKLQLAARVIVAIENP 72
>UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 268
Score = 103 bits (247), Expect = 5e-21
Identities = 54/88 (61%), Positives = 65/88 (73%), Gaps = 4/88 (4%)
Frame = +2
Query: 257 PADVFVISSRPFGQRAVLKFAAHTGATPI-AGRFTPGAFTNQIQAA---FREPRLLIVLD 424
P DV V+SSRP GQRAV+KFA +T A+ + R+TPG TNQ +A F+EP+LLIV D
Sbjct: 96 PQDVMVVSSRPIGQRAVIKFAHYTQASSTRSARWTPGTLTNQSNSASGKFQEPQLLIVTD 155
Query: 425 PAQDHQPITEASYVNIPVIALCNTDSPL 508
P D Q I EASYVNIPVIAL N+D+PL
Sbjct: 156 PHLDRQAIVEASYVNIPVIALTNSDTPL 183
Score = 64.5 bits (150), Expect = 3e-09
Identities = 24/66 (36%), Positives = 45/66 (68%)
Frame = +3
Query: 63 DVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAV 242
D ++ E+D+ +++A+ H+G + ++F M+ YV R +G++++NL TW+ + LAAR +
Sbjct: 31 DCMSRKEQDIKRLIASQCHVGTKQLHFDMKRYVSHRSDNGSYILNLEETWQHIKLAARVI 90
Query: 243 VAIETP 260
AIE P
Sbjct: 91 AAIEQP 96
>UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 256
Score = 97.9 bits (233), Expect = 3e-19
Identities = 54/115 (46%), Positives = 66/115 (57%)
Frame = +2
Query: 254 DPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 433
+P DV IS++ FG RAV KFA GA + RFTPG FTN F EPRL+IV DP
Sbjct: 68 EPKDVLAISTKSFGTRAVHKFAEFLGANYVEQRFTPGLFTNYSIKNFCEPRLMIVCDPNT 127
Query: 434 DHQPITEASYVNIPVIALCNTDSPLDLWTLLSHATPSLPTLLV*CGGLLAREVLK 598
D Q + EA+Y NIP IALC+TD+ LD + + LL REVL+
Sbjct: 128 DSQAVHEAAYANIPCIALCDTDAHLDYVDCVIPCNTKNKNSMGLVMWLLTREVLR 182
Score = 67.3 bits (157), Expect = 4e-10
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Frame = +3
Query: 72 ALNEEDVTKM-LAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVA 248
A + E V KM LAA +LG+ N++F M+ YV+ R DGTHVINL T+EK+ LAAR + A
Sbjct: 6 AADREAVIKMMLAAKVYLGSTNLSFGMKPYVFTCRKDGTHVINLAMTYEKIKLAARMIYA 65
Query: 249 IETP 260
+E P
Sbjct: 66 VEEP 69
>UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 201
Score = 95.9 bits (228), Expect = 1e-18
Identities = 44/73 (60%), Positives = 52/73 (71%)
Frame = +2
Query: 290 FGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVN 469
F Q A+LKFA +TGA IAGR TPG TNQ+Q +F EP LLI+ DP DHQPI E + N
Sbjct: 33 FQQGAILKFAQYTGAHAIAGRHTPGTLTNQLQTSFSEPYLLILTDPITDHQPIKEVALGN 92
Query: 470 IPVIALCNTDSPL 508
IP IA C+ DSP+
Sbjct: 93 IPTIAFCDIDSPM 105
>UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0B97 UniRef100
entry - Canis familiaris
Length = 258
Score = 91.5 bits (217), Expect = 2e-17
Identities = 46/86 (53%), Positives = 60/86 (69%)
Frame = +2
Query: 251 RDPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 430
+ P++V VISSR GQ A+LK AA +GA+P G FT G FT+Q+QA+ RE LL++ DP
Sbjct: 50 KHPSEVGVISSRNSGQWAMLKLAAASGASPTVGHFTSGTFTSQVQASCRELCLLLITDPR 109
Query: 431 QDHQPITEASYVNIPVIALCNTDSPL 508
DH + EA YVN+ IAL N+ SPL
Sbjct: 110 ADHPFLMEAPYVNLLTIALRNSQSPL 135
Score = 47.6 bits (108), Expect = 4e-04
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +3
Query: 99 MLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIETP 260
+L A THLG N +F+M +YKR +G ++NL R++EKL+ A +VA++ P
Sbjct: 1 LLVAGTHLGDTNPDFKMIHSIYKRETNG--ILNLERSYEKLLPVACTIVAVKHP 52
>UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13;
Archaea|Rep: 30S ribosomal protein S2P - Sulfolobus
solfataricus
Length = 231
Score = 90.6 bits (215), Expect = 4e-17
Identities = 46/118 (38%), Positives = 67/118 (56%)
Frame = +2
Query: 245 SHRDPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLD 424
S DP D+ V++SRP+ R V KFA G+ + GR PG FTN + + EP++L+V D
Sbjct: 90 SRYDPQDIIVVASRPYAYRPVQKFAEVVGSRALVGRIIPGTFTNPYLSTYIEPKVLLVSD 149
Query: 425 PAQDHQPITEASYVNIPVIALCNTDSPLDLWTLLSHATPSLPTLLV*CGGLLAREVLK 598
P D Q I EA+ V IP++A +TD+ +D L+ A L LAR++L+
Sbjct: 150 PRTDTQAIKEAAKVGIPIVAFADTDAKIDYIDLIIPANNKGRKSLALLYWALARQILR 207
Score = 41.1 bits (92), Expect = 0.032
Identities = 18/49 (36%), Positives = 33/49 (67%)
Frame = +3
Query: 90 VTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAAR 236
V L+A H+G + ME++VY+ RA+G +V+++R+ E+L +AA+
Sbjct: 39 VDTYLSAGVHIGTHSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIAAK 87
>UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:
Ribosomal protein S2 - Thermofilum pendens (strain Hrk
5)
Length = 214
Score = 90.2 bits (214), Expect = 5e-17
Identities = 49/115 (42%), Positives = 62/115 (53%)
Frame = +2
Query: 254 DPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 433
DP+ V+S R +G R V KF G P+ GR PG FTN + F E L++V DP
Sbjct: 71 DPSKFVVVSGRQYGHRPVRKFCGLVGCKPMLGRVLPGTFTNPALSHFTEADLMMVTDPRV 130
Query: 434 DHQPITEASYVNIPVIALCNTDSPLDLWTLLSHATPSLPTLLV*CGGLLAREVLK 598
D Q + EA + IPVIALC+TDSP+ L+ L LLAREVL+
Sbjct: 131 DEQAVVEAGTMGIPVIALCDTDSPISNVDLIIPTNNRGRKALALIFWLLAREVLR 185
Score = 35.1 bits (77), Expect = 2.1
Identities = 14/47 (29%), Positives = 31/47 (65%)
Frame = +3
Query: 102 LAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAV 242
LAA +G + + ME ++Y R DG +++++++T E++ +AA+ +
Sbjct: 21 LAAGIRIGTKMKSKFMEPFIYSARPDGLYLLDVKKTDERIRIAAKMI 67
>UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN SA
or P40 - Encephalitozoon cuniculi
Length = 252
Score = 87.8 bits (208), Expect = 3e-16
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Frame = +2
Query: 251 RDPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 430
+ P+ + V+S++ FG++ V+KF GATPI GRF PG+FTN +PR+LIV D
Sbjct: 74 KHPSSIAVVSTKTFGRKPVVKFCEAVGATPITGRFIPGSFTNSEVKRVYDPRVLIVSDTY 133
Query: 431 QDHQPITEASYVNIPVIALCNTDSPL---DLWTLLSHATPS 544
D Q I E+ Y N+P IA NTD+ L D+ +++ +PS
Sbjct: 134 ADKQAILESQYCNLPTIAFVNTDNSLVGVDIAIPMNNRSPS 174
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +3
Query: 63 DVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRA-DGTHVINLRRTWEKLVLAARA 239
D + + +E V ++ + +HLG + N Y+Y R D ++I++ TWEKL++AARA
Sbjct: 10 DSIKIPDEFVKLLIVSQSHLGGTSTNKSFARYLYGTRPRDRINIIDINATWEKLIIAARA 69
Query: 240 VVAIETP 260
I+ P
Sbjct: 70 FCGIKHP 76
>UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2;
Thermoplasma|Rep: 30S ribosomal protein S2P -
Thermoplasma acidophilum
Length = 199
Score = 87.0 bits (206), Expect = 5e-16
Identities = 46/115 (40%), Positives = 64/115 (55%)
Frame = +2
Query: 254 DPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 433
+P D+ V++ R + R V KFA TGAT I GRF PG TN ++E +++IV DP
Sbjct: 63 EPQDILVVAQRQYAFRPVAKFAEVTGATAITGRFNPGTLTNPSLKFYKEVKVIIVTDPLA 122
Query: 434 DHQPITEASYVNIPVIALCNTDSPLDLWTLLSHATPSLPTLLV*CGGLLAREVLK 598
D Q + EA + IP+IALC+ ++ D L+ L LLARE+LK
Sbjct: 123 DVQAMKEAVKIGIPIIALCDANNKTDFVDLIIPTNNKGRRSLAVIYWLLAREILK 177
Score = 37.5 bits (83), Expect = 0.40
Identities = 13/46 (28%), Positives = 30/46 (65%)
Frame = +3
Query: 117 HLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIE 254
H+G + + M+ Y++K R DG +++++++T KL++A + + E
Sbjct: 18 HIGTQVKSSDMKPYIFKIRNDGLYILDVKKTNSKLIVAGKMLARFE 63
>UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanosarcina acetivorans
Length = 225
Score = 83.8 bits (198), Expect = 5e-15
Identities = 39/86 (45%), Positives = 54/86 (62%)
Frame = +2
Query: 245 SHRDPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLD 424
SH DPA + V+SSR +GQ F+ G + GRF PG+ TN F EP ++IV D
Sbjct: 91 SHYDPARILVVSSRQYGQHPARMFSRALGTRAMLGRFIPGSLTNPQIHGFFEPDVIIVTD 150
Query: 425 PAQDHQPITEASYVNIPVIALCNTDS 502
PA D Q + EAS + +PV+ALC+T++
Sbjct: 151 PAGDAQVLKEASSIGVPVVALCDTNN 176
Score = 37.5 bits (83), Expect = 0.40
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = +3
Query: 90 VTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIETP--L 263
+ + LAA H+G + M +VY+ R DG +V++++ T E++ +A++ + + L
Sbjct: 40 IDEYLAAGVHIGTQQKTQDMMRFVYRVRTDGLYVLDIQSTDERIRVASKLLSHYDPARIL 99
Query: 264 MCSSSHHG 287
+ SS +G
Sbjct: 100 VVSSRQYG 107
>UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillardia
theta|Rep: 40S ribosomal protein SSA - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 82.6 bits (195), Expect = 1e-14
Identities = 38/82 (46%), Positives = 50/82 (60%)
Frame = +2
Query: 257 PADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 436
P + +SS Q A++KF+ I ++ PG TN+ F EPRLLI+ DP D
Sbjct: 64 PKHIIAVSSNNIHQTAIIKFSQFIQCNCIVDKWIPGKLTNKTSKLFEEPRLLIISDPLLD 123
Query: 437 HQPITEASYVNIPVIALCNTDS 502
Q + EASYVNIPVI++CNTDS
Sbjct: 124 KQALLEASYVNIPVISVCNTDS 145
Score = 63.3 bits (147), Expect = 7e-09
Identities = 26/61 (42%), Positives = 42/61 (68%)
Frame = +3
Query: 78 NEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIET 257
NE D+ K+L H+G M+ YV+K+R+DG ++IN+ +T +K+ LAARA+++IE
Sbjct: 4 NENDIKKLLICNVHIGLSACTQLMKVYVWKKRSDGIYIINILKTIQKIELAARAIISIEH 63
Query: 258 P 260
P
Sbjct: 64 P 64
>UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila
melanogaster|Rep: GM15484p - Drosophila melanogaster
(Fruit fly)
Length = 92
Score = 81.0 bits (191), Expect = 3e-14
Identities = 46/86 (53%), Positives = 52/86 (60%)
Frame = -1
Query: 259 GVSMXXXXXXXXTSFSQVRRKLITWVPSARRL*T*VSIWKLTFSAPRWVVAASILVTSSS 80
G+SM SFSQV +L PSARRL T SIWKLTFS PRWVVA +ILV SSS
Sbjct: 7 GLSMATMARAASCSFSQVLPRLRMLTPSARRLYTYCSIWKLTFSEPRWVVATNILVMSSS 66
Query: 79 LRASTSNPPDIVALI*VTTKRV*CHW 2
LR S PPD++ + T R C W
Sbjct: 67 LRDRISKPPDMLTWKELRTSR--CRW 90
>UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 251
Score = 76.2 bits (179), Expect = 9e-13
Identities = 40/93 (43%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Frame = +2
Query: 251 RDPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 430
++PA++ V+SSR + AVL FA TGA IA RFTPG+ TN + F+E R++IV+DP
Sbjct: 42 KNPAEIPVVSSRQYDYCAVLTFAGQTGAINIADRFTPGSSTNYVTRWFKETRVIIVIDPH 101
Query: 431 QDHQPITEASYVNIPVIA-LCNTDSPLDLWTLL 526
HQ + +A +V+I + + S + LW LL
Sbjct: 102 VSHQAMHKALFVDIAIPGNVRGRHSVVILWCLL 134
>UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanococcus jannaschii
Length = 222
Score = 72.5 bits (170), Expect = 1e-11
Identities = 28/82 (34%), Positives = 47/82 (57%)
Frame = +2
Query: 254 DPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 433
+P D+ +S R + + +F +TG +AGRF PG TN F EP ++ + DP
Sbjct: 64 EPEDILAVSRRIYTMGPLEEFGKYTGIRTVAGRFVPGTLTNPAYKGFMEPEVVFISDPRV 123
Query: 434 DHQPITEASYVNIPVIALCNTD 499
D Q + EA+ + +P++ LC+T+
Sbjct: 124 DRQALKEATEIGVPIVGLCDTE 145
Score = 43.2 bits (97), Expect = 0.008
Identities = 18/51 (35%), Positives = 34/51 (66%)
Frame = +3
Query: 102 LAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIE 254
LA+ H+G + ME ++Y+ R+DG +V+++R+T E+L +AA+ + E
Sbjct: 14 LASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLARYE 64
>UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1;
Entodinium caudatum|Rep: Putative uncharacterized
protein - Entodinium caudatum
Length = 163
Score = 71.3 bits (167), Expect = 3e-11
Identities = 31/56 (55%), Positives = 41/56 (73%)
Frame = +2
Query: 341 IAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPL 508
+ GR++PG TNQ + EPRLLIV DP D+ I E+SYVN+PVIA+CN+D+ L
Sbjct: 3 VTGRWSPGMLTNQTTKKYVEPRLLIVSDPRTDYNAILESSYVNLPVIAICNSDNML 58
Score = 34.7 bits (76), Expect = 2.8
Identities = 10/24 (41%), Positives = 21/24 (87%)
Frame = +1
Query: 508 RFVDIAIPCNTKSSHSIGLMWWVV 579
++VD AIPCN ++++SI ++W+++
Sbjct: 59 KYVDCAIPCNNRNNYSIAMIWYLL 82
>UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0182600 protein -
Oryza sativa subsp. japonica (Rice)
Length = 223
Score = 70.9 bits (166), Expect = 3e-11
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = +2
Query: 368 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPL 508
FTNQ+Q +F EPRLLI+ DP DHQPI E++ NIP IA C+TDSP+
Sbjct: 30 FTNQLQTSFSEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPM 76
Score = 37.5 bits (83), Expect = 0.40
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 502 PTRFVDIAIPCNTKSSHSIGLMWWVVGT*SVEGFRGVLSP 621
P R+VDI IP N K +SIG ++W++ V RG + P
Sbjct: 75 PMRYVDIGIPANNKGRNSIGCLFWLLAR-MVLQMRGTILP 113
>UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 267
Score = 70.9 bits (166), Expect = 3e-11
Identities = 39/93 (41%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +2
Query: 245 SHRDPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLD 424
S+ +P + SSR +G+ KFA GA GRF PG TN + EP +++V D
Sbjct: 133 SNYEPEQILAASSRQYGRFPAEKFAEAIGARVRTGRFIPGTLTNPDYDGYIEPDIVVVTD 192
Query: 425 PAQDHQPITEASYVNIPVIALC---NTDSPLDL 514
P D Q + EA V IPVIA+C NT S +DL
Sbjct: 193 PIGDAQAVKEAITVGIPVIAMCDSNNTTSNVDL 225
Score = 33.9 bits (74), Expect = 4.9
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +3
Query: 90 VTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAA 233
V L A H+G + ME ++++ R DG +V+++ T E++ AA
Sbjct: 82 VEDYLGAGVHIGTQQKTQDMERFIHRVRTDGLYVLDVSMTDERIRTAA 129
>UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S2 -
Caldivirga maquilingensis IC-167
Length = 215
Score = 70.5 bits (165), Expect = 5e-11
Identities = 47/132 (35%), Positives = 61/132 (46%)
Frame = +2
Query: 257 PADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 436
P+ V V S++P+ + + F G P+ GR PG TN + LL+V DP D
Sbjct: 75 PSRVMVHSTKPYAFKPIQMFCKFVGCLPVTGRLIPGTLTNPYLTHHIDIDLLMVADPKTD 134
Query: 437 HQPITEASYVNIPVIALCNTDSPLDLWTLLSHATPSLPTLLV*CGGLLAREVLKAFVVCF 616
Q I EAS IPVIAL +TDS L+ L LLAR+VL+
Sbjct: 135 FQAINEASLTGIPVIALVDTDSDPTFIDLMIPCNNKGRNSLALVFWLLARQVLRERGELK 194
Query: 617 PREQALGMLWVE 652
P E L + W E
Sbjct: 195 PNED-LPVSWEE 205
Score = 34.7 bits (76), Expect = 2.8
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +3
Query: 90 VTKMLAATTHLGAENVN--FQMETYVYKRRADGTHVINLRRTWEKLVLAARAV 242
V + +AA LGA N Q +++ R DG + NL+R E++ +AAR +
Sbjct: 18 VERYMAAAVRLGARVSNNYLQERGFIFSVRPDGLRIFNLKRIDERIRIAARMI 70
>UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2;
Thermoprotei|Rep: Ribosomal protein S2 - Cenarchaeum
symbiosum
Length = 208
Score = 68.1 bits (159), Expect = 2e-10
Identities = 41/116 (35%), Positives = 57/116 (49%)
Frame = +2
Query: 248 HRDPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP 427
H +++ V S + + + KFA G I RF PG TN + EP+LL+V DP
Sbjct: 65 HTGASELIVCSGKDSARVPIRKFAELVGCKDIHKRFMPGTLTNPDLPKYMEPKLLLVCDP 124
Query: 428 AQDHQPITEASYVNIPVIALCNTDSPLDLWTLLSHATPSLPTLLV*CGGLLAREVL 595
D Q +TEA+ IPVI + N+D+ ++ A L LLAREVL
Sbjct: 125 QVDAQAVTEATNAGIPVIGIANSDNVTSRLDVIIPANNRGRGALAAIFWLLAREVL 180
>UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1; Homo
sapiens|Rep: PREDICTED: similar to 40S ribosomal protein
SA (p40) (34/67 kDa laminin receptor) - Homo sapiens
Length = 99
Score = 63.3 bits (147), Expect = 7e-09
Identities = 30/45 (66%), Positives = 32/45 (71%)
Frame = +2
Query: 305 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDH 439
VLK TGA PIAG FTPG FTNQIQAAF E + L+V DP DH
Sbjct: 45 VLKRTTATGAIPIAGHFTPGNFTNQIQAAFSELQFLVVTDPRADH 89
Score = 45.6 bits (103), Expect = 0.002
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +3
Query: 48 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQM 149
MSG LD+L + E+D+ +LAA THLG+ N++FQM
Sbjct: 1 MSGILDILPMKEDDILNLLAAGTHLGSPNLDFQM 34
>UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD
laminin binding protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 34/67 kD laminin
binding protein - Strongylocentrotus purpuratus
Length = 220
Score = 60.9 bits (141), Expect = 4e-08
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +3
Query: 48 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGT-HVINL 200
MSGGL+ LAL E+DV K LA+ H+G+ N++++M Y+YKR+ DG H I L
Sbjct: 1 MSGGLECLALKEDDVQKFLASGAHIGSSNMDYKMAPYIYKRKPDGNIHSIGL 52
>UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella
natans|Rep: Ribosomal RNA S0 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 211
Score = 54.4 bits (125), Expect = 3e-06
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = +2
Query: 272 VISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPIT 451
+I ++ ++A+ + I + PG F+N+ +F P IV +P D + I
Sbjct: 68 IIDTKCISRKAIKQICIALNCRGIFKNYIPGNFSNRQIKSFMLPEAAIVAEPKNDPRIIR 127
Query: 452 EASYVNIPVIALCNTDSPLDL--WTLLSHATPSLPTLLV 562
E S +NIP+I +CNTD+ + W L S+ ++
Sbjct: 128 ELSNINIPIIGICNTDTNISFIDWVLPSNTNSKFSNAMI 166
>UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:
NEQ508 - Nanoarchaeum equitans
Length = 201
Score = 54.4 bits (125), Expect = 3e-06
Identities = 24/85 (28%), Positives = 43/85 (50%)
Frame = +2
Query: 245 SHRDPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLD 424
S+ +P ++ V+ R + KF+ T GR+ PG TN + EP ++++ D
Sbjct: 58 SYYEPNEILVVGRRETAITPIKKFSEITKVKAFPGRYPPGTLTNPQLKYYMEPEVILITD 117
Query: 425 PAQDHQPITEASYVNIPVIALCNTD 499
P D + +A I ++ALC+T+
Sbjct: 118 PIMDKNALHDAYESGITILALCDTN 142
>UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1146 UniRef100
entry - Canis familiaris
Length = 222
Score = 52.0 bits (119), Expect = 2e-05
Identities = 33/77 (42%), Positives = 41/77 (53%)
Frame = +2
Query: 272 VISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPIT 451
V SSR GQ+AVL FAA G+ P +GRFTPG T+Q+ QP
Sbjct: 48 VTSSRTTGQQAVLSFAAAVGSAPTSGRFTPGTLTDQV-------------------QPSL 88
Query: 452 EASYVNIPVIALCNTDS 502
+ YVN+P IAL + DS
Sbjct: 89 ASQYVNLPPIALYDADS 105
Score = 34.7 bits (76), Expect = 2.8
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 117 HLGAENVNFQMETYVYKRRADGTHVIN 197
HL N + Q++ YVYK++ DG +VIN
Sbjct: 1 HLDGTNFDLQIDEYVYKKKRDGMYVIN 27
>UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal
protein SA; n=1; Mus musculus|Rep: PREDICTED: similar to
Ribosomal protein SA - Mus musculus
Length = 181
Score = 50.8 bits (116), Expect = 4e-05
Identities = 24/46 (52%), Positives = 29/46 (63%)
Frame = +2
Query: 326 TGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASY 463
TGA P AG F P F N IQA F+ LL+V P + QP+TEAS+
Sbjct: 104 TGAIPTAGSFIPRPFINLIQATFQVTCLLVVTGPKMNQQPLTEASF 149
Score = 33.1 bits (72), Expect = 8.6
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 162 YKRRADGTHVINLRRTWEK-LVLAARAVVAIE 254
Y ++DGT++ L RTWEK L+L A+ VA E
Sbjct: 57 YLEKSDGTYIRYLNRTWEKLLLLEAQTTVANE 88
>UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
pneumoniae
Length = 294
Score = 45.2 bits (102), Expect = 0.002
Identities = 27/78 (34%), Positives = 40/78 (51%)
Frame = +2
Query: 368 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLDLWTLLSHATPSL 547
F +++ R P LLIV DP + + EA+ + IPV+ALCNT++ +L + A
Sbjct: 162 FFGGVKSLKRLPNLLIVDDPVYEKNAVAEANILRIPVVALCNTNTNPELVDFIIPANNHQ 221
Query: 548 PTLLV*CGGLLAREVLKA 601
P LLA V +A
Sbjct: 222 PQSTCLLMNLLADAVAEA 239
>UniRef50_A6YEB6 Cluster: Ribosomal protein S2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein S2 - Chlorokybus
atmophyticus (Soil alga)
Length = 442
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/55 (38%), Positives = 35/55 (63%)
Frame = +2
Query: 395 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLDLWTLLSHATPSLPTLL 559
+ P L+I L+P Q+ PI EA +NIP+IAL ++++P L + +++ P T L
Sbjct: 365 KRPNLIIFLNPNQNEIPIREAFNLNIPIIALVDSNTPPRLLSQITYPIPGAQTSL 419
>UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep:
RpsB - Mycoplasma gallisepticum
Length = 323
Score = 43.6 bits (98), Expect = 0.006
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +2
Query: 401 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLDLWTL 523
P +L++ DP ++ +TEA + IPVIALCNT+S ++ TL
Sbjct: 201 PHVLVIDDPIKEKNAVTEARKLRIPVIALCNTNSDPNVITL 241
>UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep:
LOC204010 protein - Homo sapiens (Human)
Length = 197
Score = 41.9 bits (94), Expect = 0.018
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +2
Query: 305 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP------AQDHQPITEASYV 466
+LKFAA TGATPIAG FTPG F + + L L P +Q H +T +
Sbjct: 1 MLKFAAATGATPIAGHFTPGTFLTRSRQPTGSHGFLWFLTPGLTTSLSQRHLVLTHLPLL 60
Query: 467 NIPVIALC 490
I LC
Sbjct: 61 YATQILLC 68
>UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4;
Mollicutes|Rep: 30S ribosomal protein S2 - Mesoplasma
florum (Acholeplasma florum)
Length = 266
Score = 41.5 bits (93), Expect = 0.024
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +2
Query: 401 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLDLWTL 523
P LIV+DP D + EA +NIPVI LC+T+ D+ TL
Sbjct: 160 PAALIVVDPKSDEIAVKEAIKLNIPVIGLCDTNVDPDIVTL 200
>UniRef50_Q9TCC3 Cluster: Ribosomal protein S2; n=1; Nephroselmis
olivacea|Rep: Ribosomal protein S2 - Nephroselmis
olivacea
Length = 235
Score = 40.7 bits (91), Expect = 0.043
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +2
Query: 383 QAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPL 508
Q +P LLIVL+P+++ + I EA +NIPVIA+ ++D+ L
Sbjct: 156 QTPISKPDLLIVLNPSKNKEAINEAWVLNIPVIAIVDSDTNL 197
>UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplasma
parvum|Rep: 30S ribosomal protein S2 - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 349
Score = 39.9 bits (89), Expect = 0.075
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +2
Query: 368 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDS 502
F I+ + P +LI++DP D I EA +NIPVIAL NT++
Sbjct: 199 FYGGIKNMKQRPDVLILVDPVNDVNAIKEARKLNIPVIALANTNA 243
>UniRef50_Q4P627 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 329
Score = 39.1 bits (87), Expect = 0.13
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +2
Query: 356 TPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLD 511
T A TN++ + +P L+IVL+P ++ I EA+ NIP IA+ TDS +D
Sbjct: 238 TGTANTNRLASQTLQPDLVIVLNPIENSFAIREATQANIPTIAI--TDSDVD 287
>UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3;
Firmicutes|Rep: 30S ribosomal protein S2 - Spiroplasma
citri
Length = 359
Score = 39.1 bits (87), Expect = 0.13
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +2
Query: 368 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 499
F I+ P+ L V+DP ++H + EA + IPVIA+C+T+
Sbjct: 148 FLGGIKGMKELPQALFVVDPKEEHIAVREARKLRIPVIAICDTN 191
>UniRef50_UPI00005A3143 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1;
Canis lupus familiaris|Rep: PREDICTED: similar to 40S
ribosomal protein SA (p40) (34/67 kDa laminin receptor)
- Canis familiaris
Length = 160
Score = 38.3 bits (85), Expect = 0.23
Identities = 25/52 (48%), Positives = 29/52 (55%)
Frame = +2
Query: 287 PFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQ 442
P + AV F T A+PI+G F NQ QAA EPRLL+V P DHQ
Sbjct: 7 PVSRAAVCCF---TAASPISG-----TFANQTQAARWEPRLLMVTHPRADHQ 50
>UniRef50_A5BFJ2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 159
Score = 38.3 bits (85), Expect = 0.23
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +2
Query: 389 AFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLDLWTLL 526
+F P + I L +QPI EA+ N P+IA C+TDSP+ LL
Sbjct: 65 SFPNPSIKITLH----YQPIKEAALGNTPIIAFCDTDSPMQCVALL 106
>UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein - Candida albicans (Yeast)
Length = 460
Score = 37.9 bits (84), Expect = 0.30
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +3
Query: 90 VTKMLAATTHLGAENVNFQ--METYVYKRRADGTHVINLRRTWEKLVLAARAVVAI 251
+ K++AA HLG +F+ M+ ++Y D H+I+L +T EKL LA + + +
Sbjct: 238 IAKLMAAGCHLGHSTSSFRPSMQPFIYGIY-DKVHIIDLNKTLEKLTLACKVIEGV 292
Score = 33.5 bits (73), Expect = 6.5
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 398 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLDLWT 520
+P L+++L+P ++ I E IP I LC+TD L T
Sbjct: 372 KPDLVVLLNPVENRNCIKECISAGIPTIGLCDTDMEPSLLT 412
>UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma
penetrans|Rep: Ribosomal protein S2 - Mycoplasma
penetrans
Length = 367
Score = 37.5 bits (83), Expect = 0.40
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +2
Query: 401 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLDL 514
P+++I+ DP + I EA + IPVIA+CNT++ DL
Sbjct: 263 PKVIILTDPEINKIAIKEARNLGIPVIAICNTNANPDL 300
>UniRef50_Q9ZE61 Cluster: 30S ribosomal protein S2; n=10;
Rickettsieae|Rep: 30S ribosomal protein S2 - Rickettsia
prowazekii
Length = 296
Score = 37.5 bits (83), Expect = 0.40
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +2
Query: 398 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLD 511
+P LL+V+D ++H I EA +NIPV+A+ +T+S D
Sbjct: 161 KPDLLVVIDTNKEHIAINEAVKLNIPVVAVVDTNSNPD 198
>UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7;
Bacteria|Rep: 30S ribosomal protein S2 - Deinococcus
radiodurans
Length = 264
Score = 37.5 bits (83), Expect = 0.40
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +2
Query: 368 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLDL 514
F I+ R P + V+DP ++ + EA+ + IPVIAL +TDS D+
Sbjct: 147 FVGGIRKMNRLPDAIFVVDPTKEVIAVQEANKLGIPVIALADTDSDPDV 195
>UniRef50_O27614 Cluster: Putative uncharacterized protein; n=1;
Methanothermobacter thermautotrophicus str. Delta H|Rep:
Putative uncharacterized protein - Methanobacterium
thermoautotrophicum
Length = 334
Score = 37.1 bits (82), Expect = 0.53
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = -2
Query: 438 WSCAGSNTIKRRGSRNAA*IWLVKAPGVKRPAIGVAPVCAANFSTAR*PKGRDEMTNTSA 259
WS GS ++R G ++ + + A G PVCA N + +R P R M + +
Sbjct: 119 WSAGGSVEVRRDGPGIEVILYSAEGDEIVSAASGFCPVCAVNIAASRVPSIRRRMASRKS 178
Query: 258 GSRWLRQHEQ 229
+ + ++E+
Sbjct: 179 RNTGMEKYER 188
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 36.3 bits (80), Expect = 0.92
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 437 HQPITEASYVNIPVIALCNTDSPLDLWTLL 526
+QPI E + N P+IA C+TDSP+ LL
Sbjct: 141 YQPIKEVALGNTPIIAFCDTDSPMQCVALL 170
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 36.3 bits (80), Expect = 0.92
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 437 HQPITEASYVNIPVIALCNTDSPLDLWTLL 526
+QPI E + N P+IA C+TDSP+ LL
Sbjct: 100 YQPIKEVALGNTPIIAFCDTDSPMQCVALL 129
>UniRef50_UPI00015A41A9 Cluster: UPI00015A41A9 related cluster; n=1;
Danio rerio|Rep: UPI00015A41A9 UniRef100 entry - Danio
rerio
Length = 1320
Score = 35.9 bits (79), Expect = 1.2
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -2
Query: 777 MGPGATTFWVLSWVPNKPCSLGLCWFNPF*LFFP-GFTVRRTNSTHNIP-SACSRGK 613
+GP A TFW+L NK C G+ P LF P ++ + + IP +AC+ K
Sbjct: 635 IGPAALTFWILGCSRNKKCKTGIT-LGPLFLFLPLKMALKXNSKSQMIPKTACANIK 690
>UniRef50_Q8ZTA0 Cluster: Putative uncharacterized protein PAE3356;
n=3; Pyrobaculum|Rep: Putative uncharacterized protein
PAE3356 - Pyrobaculum aerophilum
Length = 790
Score = 35.9 bits (79), Expect = 1.2
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = -3
Query: 740 GYPTSLVPLGFVGSTLFDFSFQGSPLEEPIQPTTSPALVHGESTPRKPSTLHV 582
GYP S+V F+ +T + S G + P + TSP+++ P+ P+T++V
Sbjct: 355 GYPGSVVQSTFIIATNYTMSNVGVEIRAPFKALTSPSILLPLLAPQSPATINV 407
>UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellular
organisms|Rep: 30S ribosomal protein S2 - Gloeobacter
violaceus
Length = 274
Score = 35.5 bits (78), Expect = 1.6
Identities = 14/40 (35%), Positives = 27/40 (67%)
Frame = +2
Query: 395 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLDL 514
R+P +L+V+D ++ + EA +NIP+++L +T+ DL
Sbjct: 156 RKPDILLVVDQRREQNAVMEARRLNIPIVSLLDTNCDPDL 195
>UniRef50_A6GAK0 Cluster: Ribosomal protein S2; n=2;
Deltaproteobacteria|Rep: Ribosomal protein S2 -
Plesiocystis pacifica SIR-1
Length = 301
Score = 34.7 bits (76), Expect = 2.8
Identities = 12/34 (35%), Positives = 25/34 (73%)
Frame = +2
Query: 401 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDS 502
P + V+DP ++H ++EA+ + +PV+AL +T++
Sbjct: 174 PGAIFVIDPNREHIAVSEANRLGVPVVALADTNA 207
>UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein MRP4, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 394
Score = 34.7 bits (76), Expect = 2.8
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 398 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLDLWT 520
+P LL+VL+P ++ + EA +P IA+ +TDS L T
Sbjct: 316 KPDLLVVLNPTENRNALLEAIKSRVPTIAIIDTDSEPSLVT 356
>UniRef50_Q88VJ4 Cluster: 30S ribosomal protein S2; n=5;
Bacteria|Rep: 30S ribosomal protein S2 - Lactobacillus
plantarum
Length = 267
Score = 34.3 bits (75), Expect = 3.7
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +2
Query: 368 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLD 511
F I+ R P ++ ++DP ++ + EA +NIP++A+ +T++ D
Sbjct: 147 FLGGIEDMPRIPDVIFIVDPRKEQIAVKEAQKLNIPIVAMVDTNTDPD 194
>UniRef50_Q9TM33 Cluster: Chloroplast 30S ribosomal protein S2; n=1;
Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S2 - Cyanidium caldarium
Length = 243
Score = 34.3 bits (75), Expect = 3.7
Identities = 13/44 (29%), Positives = 28/44 (63%)
Frame = +2
Query: 368 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 499
+ N I+ + P ++I++DP+++ I+E +NIP I + +T+
Sbjct: 146 YLNGIKGMKKPPDIIILVDPSREKTTISECQKLNIPTIGILDTN 189
>UniRef50_Q9KEH3 Cluster: BH0879 protein; n=1; Bacillus
halodurans|Rep: BH0879 protein - Bacillus halodurans
Length = 285
Score = 33.9 bits (74), Expect = 4.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 528 PMQHQVFPLYWFDVVGCWHVKC*RLSWCA 614
P+QH+V PL WFD WH R + C+
Sbjct: 192 PLQHEVIPLTWFDAYLQWHEDMRRRAKCS 220
>UniRef50_Q5JJZ8 Cluster: Putative uncharacterized protein
B1166B08.19; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
B1166B08.19 - Oryza sativa subsp. japonica (Rice)
Length = 70
Score = 33.9 bits (74), Expect = 4.9
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -3
Query: 671 SPLEEPIQPTTSPALVHGESTPRKPSTLHVPTTHHIKPI 555
SP P +P TS V S PR P VP+ H + P+
Sbjct: 30 SPSPAPAEPCTSRVAVAVASVPRAPCAAAVPSCHRVSPL 68
>UniRef50_O84687 Cluster: 30S ribosomal protein S2; n=32;
Chlamydiales|Rep: 30S ribosomal protein S2 - Chlamydia
trachomatis
Length = 282
Score = 33.9 bits (74), Expect = 4.9
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 401 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 499
P LLIV+DP + + EA + IPV+AL +T+
Sbjct: 160 PGLLIVIDPGYERIAVAEAGKLGIPVMALVDTN 192
>UniRef50_A6RSL3 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 1193
Score = 31.1 bits (67), Expect(2) = 5.2
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -3
Query: 656 PIQPTTSPALVHGESTPRKPSTLHVPTTHHIKPIEWEDL 540
P PT P VH + S L +PT K +WEDL
Sbjct: 724 PRPPTPPPPDVHWTVAAHELSKLLIPTDRQTKSCQWEDL 762
Score = 21.4 bits (43), Expect(2) = 5.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 800 GVSIPRSSWDRGPLP 756
GV +PRSS R P P
Sbjct: 715 GVPVPRSSPPRPPTP 729
>UniRef50_UPI0000E80FC9 Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 868
Score = 33.5 bits (73), Expect = 6.5
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 668 PLEEPIQPTTSPALVHGESTPRKPSTLHVPTTHHIKPIE 552
P E P+ P TSP +G T + ++ P +HH+KP E
Sbjct: 488 PTEAPVVPATSPIEGNGWLTKQVGTSATQPLSHHLKPPE 526
>UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 468
Score = 33.5 bits (73), Expect = 6.5
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 398 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLDLWT 520
+P L+++L+P ++ I E IP I LC+TD L T
Sbjct: 362 KPDLIVLLNPVENRNCINECIKQRIPTIGLCDTDMEPSLLT 402
>UniRef50_Q9GCB9 Cluster: Mitochondrial ribosomal protein S2; n=38;
Magnoliophyta|Rep: Mitochondrial ribosomal protein S2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 219
Score = 33.5 bits (73), Expect = 6.5
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +2
Query: 401 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLDLWTLLSHATPS 544
P ++V D + I EAS + IPV+A+ + + PL+ + +++ P+
Sbjct: 131 PDCVVVFDSERKSSVILEASKLQIPVVAIVDPNVPLEFFEKITYPVPA 178
>UniRef50_Q7UKH4 Cluster: 30S ribosomal protein S2; n=3;
Planctomycetaceae|Rep: 30S ribosomal protein S2 -
Rhodopirellula baltica
Length = 260
Score = 33.5 bits (73), Expect = 6.5
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +2
Query: 374 NQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDS 502
N ++ R P ++ ++DP ++ + EA + I +AL +TDS
Sbjct: 149 NGLRTMNRLPEVMFIVDPGKERNAVREAKRLGITTVALIDTDS 191
>UniRef50_Q9Y4B5-3 Cluster: Isoform 3 of Q9Y4B5 ; n=10; Amniota|Rep:
Isoform 3 of Q9Y4B5 - Homo sapiens (Human)
Length = 1586
Score = 33.1 bits (72), Expect = 8.6
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 8/77 (10%)
Frame = -3
Query: 713 GFVGSTLFDFSFQGSP--------LEEPIQPTTSPALVHGESTPRKPSTLHVPTTHHIKP 558
G G T F +G P +EE A +H E T + +H H+
Sbjct: 619 GLGGQTCFSLELRGPPVLPEQSVSIEELQGQLVQAARLHQEETETFTNKIHKMEEEHLYA 678
Query: 557 IEWEDLVLHGIAMSTNL 507
+ W++L +H +A+ L
Sbjct: 679 LRWKELEMHSLALQNTL 695
>UniRef50_Q2GCI4 Cluster: Ribosomal protein S2; n=1; Neorickettsia
sennetsu str. Miyayama|Rep: Ribosomal protein S2 -
Neorickettsia sennetsu (strain Miyayama)
Length = 298
Score = 33.1 bits (72), Expect = 8.6
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +2
Query: 401 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 499
P ++ V+DP ++H + EA + IPV+A+ +T+
Sbjct: 162 PNIIFVIDPKKEHIAVEEAWKLGIPVVAVVDTN 194
>UniRef50_Q9M1H1 Cluster: Putative uncharacterized protein
T14E10_140; n=1; Arabidopsis thaliana|Rep: Putative
uncharacterized protein T14E10_140 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 417
Score = 33.1 bits (72), Expect = 8.6
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = -2
Query: 630 ACSRGKHTTKAFNTSRANNPPHQTNRVGRLGVAWDSNVHKSSGESVL 490
+CSR K + +SR+ R GR+G WD+NVH+++ S+L
Sbjct: 86 SCSREKKQS----SSRSLKKGQSFKRSGRIGRCWDANVHRATCSSLL 128
>UniRef50_Q53PN1 Cluster: Expressed protein; n=3; Oryza sativa|Rep:
Expressed protein - Oryza sativa subsp. japonica (Rice)
Length = 601
Score = 33.1 bits (72), Expect = 8.6
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 636 PSACSRGKHTTKAFNTSRANNPPHQTN 556
PS CS+GKH + N + A++P H +N
Sbjct: 388 PSPCSKGKHQFSSHNDNLAHSPDHNSN 414
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 951,696,724
Number of Sequences: 1657284
Number of extensions: 22736995
Number of successful extensions: 61374
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 57482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61277
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70377768045
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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