Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30495
         (814 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.8  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   6.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.8  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.8  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = -3

Query: 767 GPLPSGF*AGYPTSLVPLGFVGSTLFDFSFQGSPLEEP 654
           GP+P          L P G  G+ L  F   G PL +P
Sbjct: 102 GPIPVSM--ASKMGLAPTGHPGAALPFFCHNGDPLSQP 137


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -3

Query: 725 LVPLGFVGSTLFDFSFQGSPLEEP 654
           L P G  G+ L  F   G PL +P
Sbjct: 6   LAPTGHPGAALPFFCHNGDPLSQP 29


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 641  TSPALVHGESTPRKPSTLHVPTTHHIK 561
            T   LV G+ T     TL   TT+HI+
Sbjct: 944  TERVLVPGDQTEAGVFTLRPATTYHIR 970


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +1

Query: 679 KEKSKRVEPTKPKGTRLVGYPA*NPEGSGPRSHED 783
           K   K  +P+K KGT     P  N EG     +ED
Sbjct: 349 KHLRKVGDPSKRKGTYAFRTPDENGEGGAWVGYED 383


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 527  IAMSTNLVGSLCCTKQSQE 471
            I  ST L  +LCCTK+ +E
Sbjct: 1356 ILASTEL--NLCCTKKKEE 1372


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 527  IAMSTNLVGSLCCTKQSQE 471
            I  ST L  +LCCTK+ +E
Sbjct: 1356 ILASTEL--NLCCTKKKEE 1372


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 527  IAMSTNLVGSLCCTKQSQE 471
            I  ST L  +LCCTK+ +E
Sbjct: 1356 ILASTEL--NLCCTKKKEE 1372


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 527  IAMSTNLVGSLCCTKQSQE 471
            I  ST L  +LCCTK+ +E
Sbjct: 1356 ILASTEL--NLCCTKKKEE 1372


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 484 SNHRNVDI*SFSNGLMVLCRVQYNQETRFT 395
           S  RN++  SF   L++LC +       FT
Sbjct: 268 SKSRNIEGVSFGTNLVILCALWITTLLLFT 297


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 245 YDSTSSQNKFFPG 207
           +DS S QN  FPG
Sbjct: 740 FDSRSRQNSSFPG 752


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,852
Number of Sequences: 336
Number of extensions: 5683
Number of successful extensions: 22
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)