Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30494
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 247 8e-66
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 241 4e-64
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 126 2e-29
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 122 3e-28
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z49073-5|CAA88890.1| 1122|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z81050-6|CAB02856.1| 713|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z78067-1|CAB01533.1| 1170|Caenorhabditis elegans Hypothetical pr... 28 8.8
U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical pr... 28 8.8
AF039050-4|AAC47937.1| 499|Caenorhabditis elegans Cytochrome p4... 28 8.8
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein
F25H5.4 protein.
Length = 852
Score = 247 bits (604), Expect = 8e-66
Identities = 123/229 (53%), Positives = 151/229 (65%), Gaps = 1/229 (0%)
Frame = +2
Query: 11 AQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPQHPGGL 190
AQPMPDGL +DI+ G VN RD+FK RA+ L EKYEYDVTEARKIWCFGP+GTGP +
Sbjct: 600 AQPMPDGLADDIEGGTVNARDEFKARAKILAEKYEYDVTEARKIWCFGPDGTGPNLLMDV 659
Query: 191 LQRSSVPQ*N*GLCCGWIPVGPKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTT 370
+ +EGV+++EN+RGVRFN++DVTLH DAIHRGGGQIIPT
Sbjct: 660 TKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTA 719
Query: 371 RRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFKSPRWQVHLCSL*R 550
RR YA +LTA+PRL+EPVYL EIQCPE AVGGIYGVLNRRRGHVF+ + + +
Sbjct: 720 RRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVK 779
Query: 551 PTYLSMSRSV-YCRICVPTPADRPSRSAYFDHWQVLPGEPVRTSEQALQ 694
YL ++ S + + FDHWQVLPG+P+ + Q
Sbjct: 780 -AYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQ 827
Score = 61.7 bits (143), Expect = 6e-10
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +3
Query: 156 PRVPGPNILVDCSKGVQYLNEIKDSVVAGFQWALRK 263
P GPN+L+D +KGVQYLNEIKDSVVAGFQWA R+
Sbjct: 648 PDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATRE 683
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 241 bits (590), Expect = 4e-64
Identities = 121/229 (52%), Positives = 150/229 (65%), Gaps = 1/229 (0%)
Frame = +2
Query: 11 AQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPQHPGGL 190
AQPMPDGL +DI+ G V+ RD+FK RA+Y EKYEY VTEARKIWCFGP+GTGP +
Sbjct: 600 AQPMPDGLADDIEGGTVSARDEFKARAKYPGEKYEYAVTEARKIWCFGPDGTGPNLLMDV 659
Query: 191 LQRSSVPQ*N*GLCCGWIPVGPKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTT 370
+ +EGV+++EN+RGVRFN++DVTLH DAIHRGGGQIIPT
Sbjct: 660 TKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTA 719
Query: 371 RRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFKSPRWQVHLCSL*R 550
RR YA +LTA+PRL+EPVYL EIQCPE AVGGIYGVLNRRRGHVF+ + + +
Sbjct: 720 RRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVK 779
Query: 551 PTYLSMSRSV-YCRICVPTPADRPSRSAYFDHWQVLPGEPVRTSEQALQ 694
YL ++ S + + FDHWQVLPG+P+ + Q
Sbjct: 780 -AYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQ 827
Score = 61.7 bits (143), Expect = 6e-10
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +3
Query: 156 PRVPGPNILVDCSKGVQYLNEIKDSVVAGFQWALRK 263
P GPN+L+D +KGVQYLNEIKDSVVAGFQWA R+
Sbjct: 648 PDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATRE 683
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 126 bits (304), Expect = 2e-29
Identities = 82/232 (35%), Positives = 113/232 (48%), Gaps = 7/232 (3%)
Frame = +2
Query: 5 MKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPQHPG 184
M A+P+ L EDI+ V + + + KY +D+ AR IW FGP+ TGP
Sbjct: 691 MMAEPLEKQLDEDIENEVVQIGWNRRRLGEFFQTKYNWDLLAARSIWAFGPDTTGPNILL 750
Query: 185 GLLQRSSVPQ*N*GLCCGWIPVG----PKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGG 352
S V + + G +EG + EE +R V+F + D + T+ ++RGGG
Sbjct: 751 DDTLPSEVDKHLLSTVRESLVQGFQWATREGPLCEEPIRQVKFKLLDAAIATEPLYRGGG 810
Query: 353 QIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFKS---PRW 523
Q+IPT RRC Y+ L A PRLMEP Y E+ P V +Y VL +RRGHV P
Sbjct: 811 QMIPTARRCAYSAFLMATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGS 870
Query: 524 QVHLCSL*RPTYLSMSRSVYCRICVPTPADRPSRSAYFDHWQVLPGEPVRTS 679
++ S P S RI T SA F HWQ++PG+P+ S
Sbjct: 871 PMYTISAYIPVMDSFGFETDLRI--HTQGQAFCMSA-FHHWQLVPGDPLDKS 919
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = +3
Query: 147 ALAPRVPGPNILVDCSKGVQY----LNEIKDSVVAGFQWALRK 263
A P GPNIL+D + + L+ +++S+V GFQWA R+
Sbjct: 738 AFGPDTTGPNILLDDTLPSEVDKHLLSTVRESLVQGFQWATRE 780
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 122 bits (294), Expect = 3e-28
Identities = 81/232 (34%), Positives = 112/232 (48%), Gaps = 7/232 (3%)
Frame = +2
Query: 5 MKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPQHPG 184
M A+P+ L EDI+ V + + + KY +D+ AR IW FG + TGP
Sbjct: 566 MMAEPLEKQLDEDIENEVVQIGWNRRRLGEFFQTKYNWDLLAARSIWAFGLDTTGPNILL 625
Query: 185 GLLQRSSVPQ*N*GLCCGWIPVG----PKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGG 352
S V + + G +EG + EE +R V+F + D + T+ ++RGGG
Sbjct: 626 DDTLPSEVDKHLLSTVRESLVQGFQWATREGPLCEEPIRQVKFKLLDAAIATEPLYRGGG 685
Query: 353 QIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFKS---PRW 523
Q+IPT RRC Y+ L A PRLMEP Y E+ P V +Y VL +RRGHV P
Sbjct: 686 QMIPTARRCAYSAFLMATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGS 745
Query: 524 QVHLCSL*RPTYLSMSRSVYCRICVPTPADRPSRSAYFDHWQVLPGEPVRTS 679
++ S P S RI T SA F HWQ++PG+P+ S
Sbjct: 746 PMYTISAYIPVMDSFGFETDLRI--HTQGQAFCMSA-FHHWQLVPGDPLDKS 794
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Frame = +3
Query: 168 GPNILVDCSKGVQY----LNEIKDSVVAGFQWALRK 263
GPNIL+D + + L+ +++S+V GFQWA R+
Sbjct: 620 GPNILLDDTLPSEVDKHLLSTVRESLVQGFQWATRE 655
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical protein
K10C3.5a protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.18
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 4/114 (3%)
Frame = +2
Query: 347 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFKSPRWQ 526
GGQ++ + A RL+ +Y C + A+G ++ VL++R+ V +
Sbjct: 732 GGQMMTAIKASCSAAAKKLALRLVAAMYRCTVTTASQALGKVHAVLSQRKSKVLSEDINE 791
Query: 527 V----HLCSL*RPTYLSMSRSVYCRICVPTPADRPSRSAYFDHWQVLPGEPVRT 676
+ SL P S S +C + S F HWQV+ +P T
Sbjct: 792 ATNLFEVVSL-MPVVESFS---FCDQLRKFTSGMASAQLQFSHWQVIDEDPYWT 841
>Z49073-5|CAA88890.1| 1122|Caenorhabditis elegans Hypothetical
protein ZK970.6 protein.
Length = 1122
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -2
Query: 343 SMDGISMECYIIDVESNTTQILFSHNSFLRAHWNPATTESLIS 215
SMDG M C I D+ F H SFL H N + L++
Sbjct: 645 SMDGFFMFCIITDIAEGMN---FLHKSFLHLHGNLRSATCLVN 684
>Z81050-6|CAB02856.1| 713|Caenorhabditis elegans Hypothetical
protein C50B6.7 protein.
Length = 713
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 192 SKGVQYLNEIKDSVVAGFQWALRKELWLKRICVVLD 299
+K V YLN++ D VAGF+ K +W + I +L+
Sbjct: 203 AKIVAYLNKLVDMGVAGFRHDASKHMWPQDILNILN 238
>Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical
protein C08B6.10 protein.
Length = 140
Score = 28.3 bits (60), Expect = 6.6
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -3
Query: 195 WSNPPGCWGPVPSGP 151
W PP WGP P GP
Sbjct: 117 WRRPPPPWGPPPPGP 131
>Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical protein
F22E10.2 protein.
Length = 1324
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +2
Query: 347 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRR 493
G Q + T RCL A +L + +M + + + A G ++ ++NR+
Sbjct: 1017 GDQTVDKTFRCLMAMMLCCEGIIMSAQFFPQFVGAKSAAGQMFNLINRQ 1065
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 529 TPMFIVKAYLPVNESFGLLPNLRSNTGGQAFPQCVF 636
T +F V + +PV ESF LR T G A Q F
Sbjct: 604 TNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQF 639
>Z78067-1|CAB01533.1| 1170|Caenorhabditis elegans Hypothetical
protein ZC412.2 protein.
Length = 1170
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = -2
Query: 388 CVQASSSCWNDLATTSMDGISMECYIIDVESNTTQILFSHNSFLRAHWNPATTESLISLR 209
C + S S ++ MD M I D+ + +LF HNSFL+ H + + LI R
Sbjct: 676 CSRGSLSDVISKSSMQMDSFFMFSLIRDISNG---LLFIHNSFLKCHGHLTSRCCLIDDR 732
Query: 208 Y 206
+
Sbjct: 733 W 733
>U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical
protein F45E4.7a protein.
Length = 868
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +2
Query: 5 MKAQPMPDGLPEDIDEGRVNP---RDDFKTRARYLTEKYEYDVTEARKI 142
++ P P PE R NP RDD + ++ E+ VTE R I
Sbjct: 87 IQIHPAPIAGPESTSSFRTNPEENRDDEEDNVEETDQEIEFPVTEERSI 135
>AF039050-4|AAC47937.1| 499|Caenorhabditis elegans Cytochrome p450
family protein 34A7 protein.
Length = 499
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 519 GGRYTYVHCEGLPTCQ*VVRFTAEFAFQHRRTGLPAVRISTIGRSSLEN 665
G RYT+ E + + ++ +F +HRR L +R +GR+ +E+
Sbjct: 96 GHRYTFGAMEYIREGKGIIGSNGDFWLEHRRFALMTLRNFGLGRNIIED 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,694,566
Number of Sequences: 27780
Number of extensions: 457546
Number of successful extensions: 1246
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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