Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30494
(788 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 24 1.9
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 23 2.4
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 23 2.4
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 4.3
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 7.5
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 7.5
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 7.5
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 7.5
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 7.5
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 7.5
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 7.5
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 7.5
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 21 9.9
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 23.8 bits (49), Expect = 1.9
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 192 SKGVQYLNEIKDSVVAGFQWALRKELW 272
SK V +LN++ VAGF+ K +W
Sbjct: 187 SKLVDFLNDLVAIGVAGFRVDAAKHMW 213
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 23.4 bits (48), Expect = 2.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 168 PVPSGPKHQILRASVTSYSYFSVRY 94
P+P P H +L A+V S + RY
Sbjct: 80 PLPIEPWHGVLNATVLPNSCYQERY 104
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 23.4 bits (48), Expect = 2.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 168 PVPSGPKHQILRASVTSYSYFSVRY 94
P+P P H +L A+V S + RY
Sbjct: 80 PLPIEPWHGVLNATVLPNSCYQERY 104
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 318 HSILMPSIEVVAKSFQQLEDACTHVC*LLSPV 413
HS+L + VVA S + + T++ +L PV
Sbjct: 939 HSVLHSAQSVVASSASNVTNVTTNLTTILPPV 970
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 623 RSAYFDHWQVLPGEPVRTSEQ 685
R D +VLPG+P TS++
Sbjct: 126 RKIKVDIHRVLPGKPTTTSDE 146
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 623 RSAYFDHWQVLPGEPVRTSEQ 685
R D +VLPG+P TS++
Sbjct: 126 RKIKVDIHRVLPGKPTTTSDE 146
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 623 RSAYFDHWQVLPGEPVRTSEQ 685
R D +VLPG+P TS++
Sbjct: 126 RKIKVDIHRVLPGKPTTTSDE 146
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 623 RSAYFDHWQVLPGEPVRTSEQ 685
R D +VLPG+P TS++
Sbjct: 126 RKIKVDIHRVLPGKPTTTSDE 146
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 623 RSAYFDHWQVLPGEPVRTSEQ 685
R D +VLPG+P TS++
Sbjct: 126 RKIKVDIHRVLPGKPTTTSDE 146
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 623 RSAYFDHWQVLPGEPVRTSEQ 685
R D +VLPG+P TS++
Sbjct: 126 RKIKVDIHRVLPGKPTTTSDE 146
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 623 RSAYFDHWQVLPGEPVRTSEQ 685
R D +VLPG+P TS++
Sbjct: 126 RKIKVDIHRVLPGKPTTTSDE 146
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 623 RSAYFDHWQVLPGEPVRTSEQ 685
R D +VLPG+P TS++
Sbjct: 126 RKIKVDIHRVLPGKPTTTSDE 146
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 21.4 bits (43), Expect = 9.9
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 458 AVGGIYGVLNRRR 496
A GGIY + N+RR
Sbjct: 317 AEGGIYDISNKRR 329
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,004
Number of Sequences: 438
Number of extensions: 5900
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -