Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30493
(752 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0146 + 5916692-5917931,5918198-5918261,5918836-5919057,591... 34 0.11
10_08_0324 + 16747117-16747330,16747432-16747559,16747675-167477... 32 0.43
12_02_0304 + 17112677-17113195 32 0.56
01_07_0020 - 40518950-40519471 32 0.56
05_04_0420 + 21106562-21106657,21106851-21107056,21107175-21107664 31 0.74
07_03_0072 - 13051145-13052362 31 0.98
08_02_0253 - 14869109-14869146,14869424-14869710,14869848-14870167 31 1.3
03_03_0262 + 15968884-15969687 31 1.3
02_01_0393 - 2863335-2864534 30 1.7
09_06_0137 - 21080263-21081894 30 2.3
09_04_0070 + 14308446-14308511,14308844-14309005,14309420-143094... 29 3.0
07_03_1748 - 29195037-29195427,29195552-29195679,29195810-291959... 29 3.0
07_03_1160 - 24430240-24431268 29 3.0
03_05_0172 - 21488504-21488752,21488862-21489611,21489691-214897... 29 3.0
12_02_1234 - 27227262-27227647,27227715-27227781 29 4.0
12_02_0719 + 22500217-22500395,22500506-22500551,22500671-225007... 29 4.0
12_02_0472 - 19469512-19469541,19469755-19469785,19469975-19471356 29 4.0
11_06_0578 + 25176304-25176388,25176503-25177032,25177267-251779... 29 4.0
04_01_0561 - 7209812-7210054 29 4.0
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 29 4.0
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 29 4.0
12_02_0063 + 13098519-13099585,13099759-13099906 29 5.2
12_01_0419 - 3316866-3318172,3318249-3318360 29 5.2
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 29 5.2
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704... 28 6.9
08_01_0541 + 4702930-4703328,4703411-4703506,4703601-4703649,470... 28 6.9
05_05_0199 - 23165776-23166259,23166356-23167128,23167633-231678... 28 6.9
03_05_0701 - 26925252-26925578,26929233-26930513 28 6.9
03_05_0019 + 19862171-19863049 28 6.9
02_02_0471 - 10714440-10714846,10714947-10715034,10715427-107155... 28 6.9
01_06_0102 - 26447286-26448107,26448248-26448385,26448990-264493... 28 6.9
11_06_0610 - 25449085-25453284 28 9.2
11_01_0096 - 719749-719851,719957-720074,720562-720922 28 9.2
07_01_0608 + 4515709-4515951,4516085-4516678 28 9.2
06_01_1013 - 7931756-7935109 28 9.2
03_06_0741 + 35893538-35895600,35896274-35896474,35896701-358968... 28 9.2
02_01_0210 + 1402037-1402066,1402449-1402544,1402611-1403033,140... 28 9.2
>03_02_0146 +
5916692-5917931,5918198-5918261,5918836-5919057,
5919626-5919747,5920105-5920170,5920192-5920386,
5920480-5921057,5921818-5921968,5922465-5922715
Length = 962
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/81 (28%), Positives = 34/81 (41%)
Frame = +2
Query: 269 LQPNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSP 448
+ PNRPG T K + T+ ++ A+ S + P P A SP
Sbjct: 100 ISPNRPG---TAKNVHSVVTSCISPNLTGKAENGHSLATSGISPNCPGAVKKIHSLATSP 156
Query: 449 VLQGIAGAVKKIQTTVNNPVS 511
+ GAVKKI + +P+S
Sbjct: 157 ISPNWPGAVKKIHSLATSPIS 177
>10_08_0324 +
16747117-16747330,16747432-16747559,16747675-16747744,
16747832-16747988,16748089-16748701,16749132-16749653,
16749686-16750279,16750359-16750709,16750808-16751395
Length = 1078
Score = 32.3 bits (70), Expect = 0.43
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -2
Query: 235 PEKRPEGACDC*PLWFC 185
PEKRP+ CDC P W C
Sbjct: 602 PEKRPKMTCDCWPSWCC 618
>12_02_0304 + 17112677-17113195
Length = 172
Score = 31.9 bits (69), Expect = 0.56
Identities = 20/77 (25%), Positives = 33/77 (42%)
Frame = +2
Query: 275 PNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSPVL 454
P+ A S AE T +A + P + PS+ T+P P+ G Q + +
Sbjct: 40 PSPRRAPSPSVTAEPTPAPVIAPSPPPVVAPSQPLVVAPTQPPTPSGG--SQCLRENVIA 97
Query: 455 QGIAGAVKKIQTTVNNP 505
+ G + + T +NNP
Sbjct: 98 LNVCGQL-DLSTLLNNP 113
>01_07_0020 - 40518950-40519471
Length = 173
Score = 31.9 bits (69), Expect = 0.56
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -3
Query: 465 AMPCRTGLFSKICFNGPAAGCSGFVSVGGFDSDGFAMSGAALATPVVLVASAG 307
A+PC F + + GC G GG D D ++ G A+P+ + S G
Sbjct: 90 ALPCAVDAFLDVLWQMERDGCGG----GGDDDDDLSIGGGGAASPICGLPSCG 138
>05_04_0420 + 21106562-21106657,21106851-21107056,21107175-21107664
Length = 263
Score = 31.5 bits (68), Expect = 0.74
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 6/79 (7%)
Frame = +2
Query: 254 YFLNLLQPNRPGAQSTEKPA------EATSTTGVASAAPDIAKPSESNPPTETKPEQPAA 415
YF+ QP+ P A + +P E T GV +A P P S+P P A
Sbjct: 147 YFMLRAQPDEPAAPAARRPPGPAGGDEPTPIVGVPTAVPAGFPPPVSSPNPLLVPVPAAQ 206
Query: 416 GPLKQIFENSPVLQGIAGA 472
P Q F + Q + A
Sbjct: 207 APPNQQFAHPATSQALPHA 225
>07_03_0072 - 13051145-13052362
Length = 405
Score = 31.1 bits (67), Expect = 0.98
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Frame = +1
Query: 31 SVPNIFGGVA-----LQPLSQMFKATQPP---QRRDLRRGKICRRK*ATFLIPRDKTVTN 186
+VPNI G+A + L+ +A P Q L + R+ TFL+PR
Sbjct: 7 AVPNISEGLAKISTKMMDLAAQLQALAAPSAEQAMSLGAAERSDRQAMTFLLPRQHEFKQ 66
Query: 187 KTRAVNSRRRL 219
+ R NSRRR+
Sbjct: 67 RLRGANSRRRM 77
>08_02_0253 - 14869109-14869146,14869424-14869710,14869848-14870167
Length = 214
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 15 LEPSMECSKYF-WRSSTAAPQSDVQGDATTTTQRPAPW 125
L P ++CS RS+ AP ++QG + +T + P PW
Sbjct: 3 LPPVVDCSLASNERSTVPAPTVNIQGTSFSTVEAPGPW 40
>03_03_0262 + 15968884-15969687
Length = 267
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 314 EATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGPL 424
+A T G A+A P PS + P QP+AGP+
Sbjct: 170 DAVRTGGAAAATPPPPPPSSHHQQQPAFPPQPSAGPI 206
>02_01_0393 - 2863335-2864534
Length = 399
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = +2
Query: 284 PGAQSTEKPAEATSTTGVASAA---PDIAKPSESNPPTETKPEQPAAGPLKQIFENSPVL 454
P + PA A +T +S+A P A S + PP + + QP +K+ + P
Sbjct: 108 PQQKQPPVPASAAATRAYSSSAALVPSPAPASATTPPMKQRTGQPTPAAIKRQRQLQPAP 167
Query: 455 QGIAGAVKKIQTTVNNPVSQEI 520
+AG I V++ I
Sbjct: 168 TRVAGPADLINLAQAGRVNEAI 189
>09_06_0137 - 21080263-21081894
Length = 543
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 308 PAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGP 421
P+ A + AAP +A P E P E +PE PA P
Sbjct: 13 PSSARHLRRLCDAAPTLAPPPEPEPEPELEPE-PALAP 49
>09_04_0070 +
14308446-14308511,14308844-14309005,14309420-14309473,
14310009-14310073,14310391-14310459,14310590-14310767,
14311085-14311231,14311316-14311432,14311507-14311619,
14311703-14311781,14311892-14312020
Length = 392
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 332 GVASAAPDIAK-PSESNPPTETKPEQPAA 415
G +S+AP +K PS PPT+T P PA+
Sbjct: 79 GSSSSAPATSKAPSNQAPPTQTVPAAPAS 107
>07_03_1748 -
29195037-29195427,29195552-29195679,29195810-29195938,
29196334-29196412,29196508-29196671,29196754-29196936,
29197021-29197146,29197237-29197328,29197412-29197508,
29198013-29198339
Length = 571
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 284 PGAQSTEKPAEATSTTGVASA--APDIAKPSESNPPTETKPE 403
P +Q+ + P T+T+ +SA +P + P+ES PPT E
Sbjct: 68 PSSQADDVPTTTTATSPPSSAPSSPPSSPPAESVPPTAADSE 109
>07_03_1160 - 24430240-24431268
Length = 342
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +2
Query: 272 QPNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSP 448
QP +P KP + + PD +P NP KP+QP P + +E P
Sbjct: 270 QPPQPNPNGPPKPDQPPQPNPNGPSKPD--QPPRPNPDMPPKPDQP---PQPEYYEQPP 323
>03_05_0172 -
21488504-21488752,21488862-21489611,21489691-21489789,
21489862-21490776,21490847-21490976,21491438-21491583,
21491801-21491896,21492521-21492613,21492702-21492755,
21492897-21492956,21493046-21493171,21493283-21493366,
21493444-21493587,21493667-21493963
Length = 1080
Score = 29.5 bits (63), Expect = 3.0
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = +2
Query: 269 LQPNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNP-PTETKPEQPAAGPLKQIFENS 445
L PN A PA S SAAP A P S P PT P AA +Q ++
Sbjct: 39 LHPNLAAASPPMSPAAKNS-----SAAPG-ASPRSSKPVPTSAAPPSKAAAEGEQ--ASA 90
Query: 446 PVLQGIA-GAVKKIQTTVNNPVSQEILKWLKR 538
P + A V +++ TV+ PV + L ++++
Sbjct: 91 PANEAPAVKVVVRVRPTVSRPVDGKDLFFVRK 122
>12_02_1234 - 27227262-27227647,27227715-27227781
Length = 150
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = +2
Query: 314 EATSTTGVASAAPDIAKPSESN-----PPTETKPEQPAAGPLKQIFENSPVLQGIAGAVK 478
E++S GV D PS S PP E P AA P +E + G +
Sbjct: 13 ESSSMLGVGHREKDDESPSTSGKSSPPPPPEQNPLDAAAAPCFTFYEAGKNCKAETGDEE 72
Query: 479 KIQTTVNNPVSQEILKWLKRLN 544
+ +TT + Q I+ +R++
Sbjct: 73 EYETTRSKLEEQMIISSWERIS 94
>12_02_0719 +
22500217-22500395,22500506-22500551,22500671-22500745,
22500846-22500932,22501077-22501148,22501267-22501338,
22501448-22501519,22501644-22502510
Length = 489
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 290 AQSTE-KPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPA 412
A++ E KPAE T TT + + + +E+ P ET +PA
Sbjct: 261 AETAEVKPAEETETTPMVQTEVKLEEETETTPVAETTEVKPA 302
>12_02_0472 - 19469512-19469541,19469755-19469785,19469975-19471356
Length = 480
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 263 NLLQPNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGP 421
N L+P +P E + + + +SAA DI + NPP + + + A P
Sbjct: 236 NSLKPPKPKRNLVEISQQISHQSSSSSAANDIKEEKPHNPPCQEEKKSGMAPP 288
>11_06_0578 +
25176304-25176388,25176503-25177032,25177267-25177997,
25178122-25178172,25178562-25178813,25178894-25179004,
25179102-25179183,25179460-25179489
Length = 623
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 317 ATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSP 448
A S+T +S A + P+ +PP P PA+ PL + + P
Sbjct: 349 AGSSTPSSSQARKASAPAPPSPPEPPSPRHPASPPLLRSLPHQP 392
>04_01_0561 - 7209812-7210054
Length = 80
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 296 STEKPAEATSTTGV-ASAAPDIAKPSES-NPPTETKPEQPAAGPLKQIF 436
+ E+PAEA S TG AA +P + +P +T P AA P+ F
Sbjct: 20 AAEEPAEARSATGTPVDAAHSSRRPIHAGDPADDTLPADDAAPPVIDAF 68
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 290 AQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGP 421
+ ST P +TS++ +S +P P S PP P P+A P
Sbjct: 1130 SSSTGSPPSSTSSSPPSSQSPP---PGSSPPPASPPPSTPSAPP 1170
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +2
Query: 281 RPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAA 415
+P A STE A S ASA A P+ + P T PE A
Sbjct: 706 QPAAYSTEATTAAASQDQSASAPATGAAPATTAAPAPTAPENSGA 750
>12_02_0063 + 13098519-13099585,13099759-13099906
Length = 404
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 287 GAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGP 421
GA S + A +S T A+ PS+ +PP +T P P P
Sbjct: 232 GAVSAKPMAPQSSVTASAAPPRCAVAPSQHHPPFQTYPTDPFEPP 276
>12_01_0419 - 3316866-3318172,3318249-3318360
Length = 472
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Frame = +2
Query: 272 QPNRPGAQST---EKPAEATSTTGVASAAPDIAK-PSESNPPTETKPEQPAAGPLKQIFE 439
QP P A E PAE T T P A+ P + P E +PE P E
Sbjct: 313 QPKPPAAVEPPVQEPPAEETPTATEPEPEPPAAEEPPAAEPEQEPQPETPPVESETPAEE 372
Query: 440 NSPV 451
+PV
Sbjct: 373 QAPV 376
>06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 7/50 (14%)
Frame = +2
Query: 272 QPNRPGAQSTEKPAEATSTTGVASAAP------DIA-KPSESNPPTETKP 400
Q + +STE+P E + V P D+ KPSES P TET P
Sbjct: 1003 QTDEASDKSTEQPLEPENDASVEDEKPPEIESDDVHDKPSESTPDTETLP 1052
>12_02_0118 -
13869237-13869307,13869375-13869465,13870321-13870440,
13870668-13870795,13871159-13871270,13871719-13871817,
13871918-13871992,13872099-13872320,13873177-13874034
Length = 591
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +2
Query: 323 STTGVASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAV 475
S+ A P A+P +PP ++P P A P + + P G G +
Sbjct: 54 SSIRAPQAPPPGARPFPGSPPPPSQPPPPFARPAAPVQQQPPPFGGPPGVM 104
>08_01_0541 +
4702930-4703328,4703411-4703506,4703601-4703649,
4703771-4703865
Length = 212
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +2
Query: 281 RPGAQSTEKPAEATSTTGVAS-----AAPDIAKPSESNPPTETKPEQPAAGP 421
+P + KP+ A+ +G +S AA D++ S S+P + KP P A P
Sbjct: 22 KPKPKPKTKPSPASLLSGGSSPASGDAADDLSFLSPSSPVVKPKPRSPLAAP 73
>05_05_0199 -
23165776-23166259,23166356-23167128,23167633-23167869,
23167973-23168197
Length = 572
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 423 NGPAAGCSGFVSVGGFDSDGFAMSGAALATPVVLV--ASAGFSVD 295
NG G SG+ GG SD ++ + A TPV +SA F D
Sbjct: 280 NGRGRGGSGYALHGGAASDAYSSADALSGTPVATPENSSASFGDD 324
>03_05_0701 - 26925252-26925578,26929233-26930513
Length = 535
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 290 AQSTEKPAEATSTTGVASAAPDIAKPSESNPPTET--KPEQPAAGPLKQIFENSPVLQGI 463
A P+ S A+A+ A + SN + + +QPAA P + E P+L+ +
Sbjct: 48 ASRAAAPSSPPSPHAAAAASAPSAGAAASNQASSHHHQQQQPAAAPQPPLLEPLPLLRDV 107
Query: 464 AGA 472
A A
Sbjct: 108 AAA 110
>03_05_0019 + 19862171-19863049
Length = 292
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 320 TSTTGVASAAPDIAKPSESNPPTETKPEQPAAGPLK 427
T T A A P AK PP T+ +QP P K
Sbjct: 160 TKPTAAAPATPPAAKRPPEPPPKTTQRQQPPGPPPK 195
>02_02_0471 -
10714440-10714846,10714947-10715034,10715427-10715516,
10715614-10715727
Length = 232
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 284 PGAQSTEKPAEATSTTGVASAAPDIAKPSESNPP 385
P A E P EA +T A AAP AK E P
Sbjct: 199 PAAAEAEPPVEAAATPAAAEAAP--AKAEEEEAP 230
>01_06_0102 - 26447286-26448107,26448248-26448385,26448990-26449359,
26449505-26449606,26449696-26449788,26449934-26450181,
26451088-26451274,26451825-26452043,26452464-26452660,
26453545-26453875,26454099-26454457,26455141-26455240,
26455349-26455464,26455547-26455663,26455782-26455880,
26456057-26456131,26456205-26456286,26457724-26457763,
26458685-26458769,26458924-26459055
Length = 1303
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = +2
Query: 275 PNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGP 421
P G + A TTG +A P+++ P E KP + A P
Sbjct: 1148 PMVQGTPMVQGTPMAEGTTGAQAAPTAQGAPAQTQNPEEAKPSESTAAP 1196
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 275 PNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGP 421
P P ++++ P A G + P+ PSE +PPT PE A+ P
Sbjct: 618 PPTPESKASSPPPPAPE--GHTPSPPESTPPSEKSPPT---PESKASSP 661
>11_01_0096 - 719749-719851,719957-720074,720562-720922
Length = 193
Score = 27.9 bits (59), Expect = 9.2
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = +1
Query: 526 VVEETKSEQEKGGVILLPVHGHGGSPWKWVG-DN*QRQLTGL---KSGSRQGNPRVFHRK 693
V EE + E +K G G G VG ++ +R++ G+ + G + R R
Sbjct: 55 VDEELRREMQKRGRAAWSGEGCAGRSGTEVGRESGRRRVDGIDPGEGGGEKARERERERD 114
Query: 694 EKNRGGGLKG 723
E+N GGG G
Sbjct: 115 ERNLGGGTAG 124
>07_01_0608 + 4515709-4515951,4516085-4516678
Length = 278
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Frame = +2
Query: 290 AQSTEKPAEATSTTGVASAAPDIAKPSES---NPPTETKPEQPAAGPLKQI---FENSPV 451
A +T K A+ + T + AA AKP S T T P +P P K ++SP
Sbjct: 182 APATTKAAKPATKTKIKVAAAPAAKPKASPKAKAKTATSPVKPRGRPAKSAKTSAKDSPA 241
Query: 452 LQGIAGAVKK 481
+ A KK
Sbjct: 242 KKAAPVAAKK 251
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -3
Query: 462 MPCRTGLFSKICFNGPAAGCSGFVSVGGF 376
+PCR K+C GP C+ +S F
Sbjct: 321 LPCRRHRCEKVCHTGPCGDCNVLISARCF 349
>03_06_0741 +
35893538-35895600,35896274-35896474,35896701-35896814,
35897570-35897649,35897772-35897896,35898008-35898079
Length = 884
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 257 FLNLLQPNR-PGAQSTEKPAEATSTTGVASAAPDIAKPSE 373
FL L P + PG + KP+ A ST+ +S++P +A+ E
Sbjct: 13 FLFLSPPGKLPGGKPRLKPSCAASTSSSSSSSPSLAEQLE 52
>02_01_0210 +
1402037-1402066,1402449-1402544,1402611-1403033,
1403126-1403215,1403330-1403401,1403851-1403980,
1404172-1404269
Length = 312
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 416 GPLKQIFENSPVLQGIAGAVKK 481
G +KQ+ E PV++G+ GA+K+
Sbjct: 264 GKVKQLGEKFPVIRGLLGAIKR 285
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,360,534
Number of Sequences: 37544
Number of extensions: 518418
Number of successful extensions: 2011
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2005
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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