Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30493
(752 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15491| Best HMM Match : zf-C3HC4 (HMM E-Value=0.079) 32 0.43
SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9) 32 0.57
SB_3180| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23) 31 0.76
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_9231| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 31 1.0
SB_23319| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_34932| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.38) 30 1.8
SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16) 30 2.3
SB_50641| Best HMM Match : Rad21_Rec8_N (HMM E-Value=0) 30 2.3
SB_36252| Best HMM Match : IQ (HMM E-Value=2.7e-35) 29 3.1
SB_19649| Best HMM Match : Keratin_B2 (HMM E-Value=0.082) 29 4.1
SB_9846| Best HMM Match : DUF605 (HMM E-Value=0.046) 29 4.1
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 29 5.4
SB_32131| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84) 29 5.4
SB_6777| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_41328| Best HMM Match : NLPC_P60 (HMM E-Value=5.8) 29 5.4
SB_25521| Best HMM Match : NLPC_P60 (HMM E-Value=5.7) 29 5.4
SB_15157| Best HMM Match : DUF1153 (HMM E-Value=1.7) 29 5.4
SB_10763| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_993| Best HMM Match : rve (HMM E-Value=2.7e-33) 29 5.4
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 28 7.1
SB_38173| Best HMM Match : PAN (HMM E-Value=0.0013) 28 7.1
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 28 7.1
SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_11167| Best HMM Match : Mucin (HMM E-Value=4.9) 28 7.1
SB_58558| Best HMM Match : EGF (HMM E-Value=0) 28 9.4
SB_47678| Best HMM Match : zf-U1 (HMM E-Value=0.0086) 28 9.4
SB_47282| Best HMM Match : RCSD (HMM E-Value=0.53) 28 9.4
SB_16908| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_11994| Best HMM Match : ERM (HMM E-Value=0.28) 28 9.4
SB_34508| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_13074| Best HMM Match : Fz (HMM E-Value=5.3e-17) 28 9.4
>SB_15491| Best HMM Match : zf-C3HC4 (HMM E-Value=0.079)
Length = 689
Score = 32.3 bits (70), Expect = 0.43
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +2
Query: 263 NLLQPNRPGAQSTEKPAEATSTTGVASAAPD--IAKPSESNPPTETKPEQPAAGPLKQIF 436
N+ P PG +T KP + S G + + K + S T P L+ I+
Sbjct: 362 NVTPPPPPGGHTTSKPIDEPSLPGPTTCRGESGTGKATPSTMSTNAHRHHPLGHELRNIY 421
Query: 437 ENSPV 451
E SP+
Sbjct: 422 ERSPL 426
>SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9)
Length = 496
Score = 31.9 bits (69), Expect = 0.57
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +2
Query: 275 PNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGPLKQI 433
P RPG + + +ST G P KPS PP TK + A L+ I
Sbjct: 324 PGRPGTPGDGRGGQRSSTLGT----PGKPKPSPGKPPCRTKKDASIARELRHI 372
>SB_3180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 31.9 bits (69), Expect = 0.57
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 3/96 (3%)
Frame = +2
Query: 281 RPGAQSTEKPAEATSTTGVASAAP---DIAKPSESNPPTETKPEQPAAGPLKQIFENSPV 451
+P T +P+ T+T A P + A P NP P P+ G +Q+ + P+
Sbjct: 243 QPKITGTSQPSNPTATQPQNPAIPQPQNPAIPQLPNPAIPQPPNPPSGGQPQQVVTSQPL 302
Query: 452 LQGIAGAVKKIQTTVNNPVSQEILKWLKRLNLSKRR 559
Q + K + P S+E + K+ SK R
Sbjct: 303 NQEVPQPTKPL------PASKEASRKTKKSAASKHR 332
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +2
Query: 272 QPNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAG-PLKQ 430
QP+ P A + PA P+ A P NPP+ +P+Q PL Q
Sbjct: 251 QPSNPTATQPQNPAIPQPQNPAIPQLPNPAIPQPPNPPSGGQPQQVVTSQPLNQ 304
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 31.5 bits (68), Expect = 0.76
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 296 STEKPAEATSTTGVASAAPDIAKPSES-NPPTETKPEQPAAGPLKQIFENSPVLQGIAGA 472
+T +P+EAT+ + P KP+ S PT+ P + A P K N P + A
Sbjct: 739 TTTRPSEATAKPQATAIPPATTKPTGSTQSPTDNSPSEKAMKPGK---ANKPPVPTQAPT 795
Query: 473 VKKIQTTVNNP 505
K T N P
Sbjct: 796 EMKSSTARNPP 806
>SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23)
Length = 1153
Score = 31.5 bits (68), Expect = 0.76
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +2
Query: 275 PNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSPVL 454
P P A+ P ++ TT + SA + S++ T P + + +SP
Sbjct: 837 PTVPPAKPVPTPVVSSLTTPLVSAT--VLNASQAQTRVATSVAAPTSAQYSAVTSSSPRG 894
Query: 455 QGIAGAVK 478
QG+AGA++
Sbjct: 895 QGVAGAIQ 902
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 296 STEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSPV 451
S++ A T+ AS++ + + P S PPT TK P+ G Q +PV
Sbjct: 994 SSKPQASPTTDRRAASSSSNHSTPVNSAPPTPTKNATPSKGTPGQSTSGTPV 1045
>SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1468
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 248 SIYFLNLLQPNRPGAQSTEKPA-EATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGP 421
+++ + L+P ++T +P E TT + P KP + P+ TKPE P
Sbjct: 1080 NVHTTDALKPTTEPPRTTPEPTTEPPRTTPEPTTEPSRTKPEPTTEPSRTKPEPTTEPP 1138
>SB_9231| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
Frame = +2
Query: 263 NLLQPNRPGAQSTEKPAEATS---TTGVASAAPDIAKPSES----NPPTETKPEQPAAGP 421
NL P RP S + E TS TT S A + +P E + P +PA G
Sbjct: 48 NLTPPERPFGLSDDDTDEETSTSATTATTSPASTVEQPREQLNLPSIPITPLNSRPATGT 107
Query: 422 LKQIFENSP 448
+K+ F +P
Sbjct: 108 VKERFSTAP 116
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 272 QPNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQP 409
+P T P + T+TT A+ P KP+ + PP T P +P
Sbjct: 119 KPTTTTPPGTTTPTKPTTTTPPATTTP--TKPTTTTPPATTTPTKP 162
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 272 QPNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQP 409
+P +T P T+TT A+ P KP+ + PP T P +P
Sbjct: 77 KPTTTTPPATTTPTTPTTTTPPATTTP--TKPTTTTPPATTTPTKP 120
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 275 PNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQP 409
P +T P + T+TT A+ P KP+ + PP T P +P
Sbjct: 92 PTTTTPPATTTPTKPTTTTPPATTTP--TKPTTTTPPGTTTPTKP 134
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 299 TEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQP 409
T P T+TT A+ P KP+ + PP T P +P
Sbjct: 44 TTTPTTPTTTTPPATTTP--TKPTNTTPPATTTPTKP 78
>SB_23319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 293 QSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQP 409
++T KP+ ++T + A A PS++ P +TKP+ P
Sbjct: 141 KATPKPSAPVASTSKTTPARGRAGPSKTRQPIKTKPKPP 179
>SB_34932| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.38)
Length = 414
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/65 (26%), Positives = 28/65 (43%)
Frame = +2
Query: 269 LQPNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSP 448
LQP + G ++ + GVA A+PS++ PT + GP + N+P
Sbjct: 161 LQPQQAGMLYGQQGQQYLPQQGVAGQMAPGAQPSQAQRPTNLQIPARPQGPARASTPNTP 220
Query: 449 VLQGI 463
G+
Sbjct: 221 TSMGL 225
>SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16)
Length = 678
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Frame = +2
Query: 221 WSLFWCTKFSIYFLNLLQPNRPGAQSTEKPAE-ATSTTGVAS---AAPDIAKPSESNPPT 388
WS W K+ YF L+ + + AE TST G S A IA + P
Sbjct: 423 WSCHWDRKYKQYFYTNLETKKSQWEFPTDDAEPETSTDGAPSFSTAVETIAAVTMGMPTQ 482
Query: 389 ETKPE-QPAAGPLKQIFENS 445
T PAA P+ Q + N+
Sbjct: 483 ATMTAITPAAAPVAQPWPNA 502
>SB_50641| Best HMM Match : Rad21_Rec8_N (HMM E-Value=0)
Length = 816
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/56 (26%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 353 DIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQT-TVNNPVSQE 517
DI KP+ PPT+T+ ++++F N P+++ AG + + T + N ++++
Sbjct: 587 DIVKPATLAPPTKTRKRLKKRSKVEELFAN-PMVELFAGPLVECFTENLTNKIAED 641
>SB_36252| Best HMM Match : IQ (HMM E-Value=2.7e-35)
Length = 442
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Frame = +2
Query: 368 SESNPPTETKP--EQPAAGPLKQIFENSPV-LQG--IAGAVKKIQTTVNNPVSQEILKWL 532
++S PP E +P E PAAGP E + L + A KIQ + + S+E +K L
Sbjct: 207 ADSGPPAEAEPEAEAPAAGPTAAADEEVDIDLDDPEVQNAALKIQASFRSHKSRESVKSL 266
Query: 533 KRLNLSKRREASFC 574
+ N +K + C
Sbjct: 267 TQ-NEAKAKTEKDC 279
>SB_19649| Best HMM Match : Keratin_B2 (HMM E-Value=0.082)
Length = 279
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +2
Query: 296 STEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPA-AGPLK-----QIFENSPVLQ 457
S ++PA+ +T+ V++ P I +P++ ++ QP+ P K Q+ N P ++
Sbjct: 103 SIKQPAKHQTTSQVSNNQPSIKQPAKYQTTSQVSNNQPSIKQPAKYQTTSQVSNNQPSIK 162
Query: 458 GIAGAVKKIQTTVNNPVSQEILK 526
A K QTT P +Q +K
Sbjct: 163 QPA----KYQTTSQAPKNQPSIK 181
>SB_9846| Best HMM Match : DUF605 (HMM E-Value=0.046)
Length = 811
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 272 QPNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGP 421
+PN P S KP +S S A + P +NP + KP PA+ P
Sbjct: 624 KPNNPS--SNPKPNNPSSNPKSNSPA---SNPKSNNPSSNPKPNNPASNP 668
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Frame = +2
Query: 281 RPGAQSTE-----KPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGPLK 427
+PG+ ST+ KP AT+ G ASA P+ T++ P G K
Sbjct: 1628 KPGSSSTKPGTSAKPGAATAKPGAASAKPEAVPAKTGAASTKSGPSAAKPGSTK 1681
>SB_32131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 106
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 281 RPGAQSTEKPAEATS--TTGVASAAPDIAK-PSESNPPTETKPEQPA 412
R Q +K EATS + P++ + P ESNPP + PE P+
Sbjct: 39 RRNVQCAKKVPEATSEEVSKENQGNPELIQDPIESNPPVDQPPEPPS 85
>SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84)
Length = 944
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Frame = +2
Query: 281 RPGAQSTE-----KPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGPLK 427
+PG+ ST+ KP AT+ G ASA P+ T++ P G K
Sbjct: 523 KPGSSSTKPGTSAKPGAATAKPGAASAKPEAVPAKTGAASTKSGPSAAKPGSTK 576
>SB_6777| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 281 RPGAQSTEKPAEATS--TTGVASAAPDIAK-PSESNPPTETKPEQPA 412
R Q +K EATS + P++ + P ESNPP + PE P+
Sbjct: 116 RRNVQCAKKVPEATSEEVSKENQGNPELIQDPIESNPPVDQPPEPPS 162
>SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2211
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 281 RPGAQSTEKPAEATS--TTGVASAAPDIAK-PSESNPPTETKPEQPA 412
R Q +K EATS + P++ + P ESNPP + PE P+
Sbjct: 2144 RRNVQCAKKVLEATSEKVSKENQGNPELIQDPIESNPPVDQPPEPPS 2190
>SB_41328| Best HMM Match : NLPC_P60 (HMM E-Value=5.8)
Length = 155
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 281 RPGAQSTEKPAEATS--TTGVASAAPDIAK-PSESNPPTETKPEQPA 412
R Q +K EATS + P++ + P ESNPP + PE P+
Sbjct: 88 RRNVQCAKKVPEATSEEVSKENQGNPELIQDPIESNPPVDQPPEPPS 134
>SB_25521| Best HMM Match : NLPC_P60 (HMM E-Value=5.7)
Length = 212
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 281 RPGAQSTEKPAEATS--TTGVASAAPDIAK-PSESNPPTETKPEQPA 412
R Q +K EATS + P++ + P ESNPP + PE P+
Sbjct: 145 RRNVQCAKKVPEATSEEVSKENQGNPELIQDPIESNPPVDQPPEPPS 191
>SB_15157| Best HMM Match : DUF1153 (HMM E-Value=1.7)
Length = 412
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 281 RPGAQSTEKPAEATS--TTGVASAAPDIAK-PSESNPPTETKPEQPA 412
R Q +K EATS + P++ + P ESNPP + PE P+
Sbjct: 345 RRNVQCAKKVPEATSEKVSKENQGNPELIQDPIESNPPVDQPPEPPS 391
>SB_10763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +2
Query: 284 PGAQSTEKPAEATSTTG--VASAA---PDIAKPSESNPPTETKPEQPAA 415
P + S+ A A +T G VA+AA P++ KP+ ++ P P QPAA
Sbjct: 91 PSSASSPSSATAATTAGKPVAAAAKDLPEVRKPATASSPA---PSQPAA 136
>SB_993| Best HMM Match : rve (HMM E-Value=2.7e-33)
Length = 735
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 281 RPGAQSTEKPAEATS--TTGVASAAPDIAK-PSESNPPTETKPEQPA 412
R Q +K EATS + P++ + P ESNPP + PE P+
Sbjct: 668 RRNVQCAKKVPEATSEEVSKENQGNPELIQDPIESNPPVDQPPEPPS 714
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/49 (26%), Positives = 18/49 (36%)
Frame = +2
Query: 275 PNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGP 421
P R P S +A ++P + PP E +P P GP
Sbjct: 209 PERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGP 257
>SB_38173| Best HMM Match : PAN (HMM E-Value=0.0013)
Length = 340
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 305 KPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGP 421
KP + T T KP++S PTE+KP P + P
Sbjct: 187 KPTKPTKPTKSTKPTKS-TKPTKSTKPTESKPTAPTSLP 224
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/49 (26%), Positives = 18/49 (36%)
Frame = +2
Query: 275 PNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGP 421
P R P S +A ++P + PP E +P P GP
Sbjct: 121 PERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGP 169
>SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2408
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 284 PGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQP 409
P +T P+ +T++ V P+ A S S PPTET P P
Sbjct: 236 PSTANTPLPSVSTASPQVIDTPPE-AVSSSSQPPTET-PSPP 275
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 290 AQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETK-PEQPAAGPLKQIFENS 445
++S K E ++T +S PD PP++T+ P + A+G ++I S
Sbjct: 772 SKSKSKSVEKRTSTEKSSKEPDPGVSKMMGPPSQTQLPNKAASGDTEKILRRS 824
>SB_11167| Best HMM Match : Mucin (HMM E-Value=4.9)
Length = 297
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 118 RRGKICRRK*ATFLIPRDKTVTNKTRAVNSRRRLLVS 228
RR + +R+ AT + R + VT + RAV RRR +VS
Sbjct: 50 RRRVVTQRRRAT--VRRRRVVTTRRRAVTRRRRAIVS 84
>SB_58558| Best HMM Match : EGF (HMM E-Value=0)
Length = 1101
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 6/57 (10%)
Frame = -2
Query: 259 EVNGKFCTPEKRPEGACDC*PLWFCWLLFCP--WGLK----KLLICDGRFCHGAGLC 107
++N C P+ G C L W+ CP WG K + CD C G C
Sbjct: 386 QINVNDCIPDPCQNGGFCCCDLVNDWICLCPGGWGGKNCTENINDCDPNPCGNGGTC 442
>SB_47678| Best HMM Match : zf-U1 (HMM E-Value=0.0086)
Length = 502
Score = 27.9 bits (59), Expect = 9.4
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Frame = +2
Query: 305 KPAEATSTTGVASAAPDIAKPSESNPPTETKP-----EQPAAGPLKQIFENSPVLQGIAG 469
+PA T+ A PS S PP T P +QPA P K N ++G+
Sbjct: 407 QPASQQQTSVQRDHGASYANPSTSGPPPYTAPPTSGTQQPA--PRKSNVANQEFIKGLGE 464
Query: 470 AVKKIQTTVNNPVSQEILKWLKRLNLSKRRE 562
K + + + V+ ++ L + L R +
Sbjct: 465 LGKLVSSEEDASVALQVSNVLTQALLQYRMQ 495
>SB_47282| Best HMM Match : RCSD (HMM E-Value=0.53)
Length = 264
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/72 (23%), Positives = 28/72 (38%)
Frame = +2
Query: 224 SLFWCTKFSIYFLNLLQPNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPE 403
+ F +F+I L+ + + A AT A P P PP KP+
Sbjct: 40 TFFQLDEFNIVKTFLVSQLEKKLEEAKSMAAATPPPLCAPPPPPPPPPPPPPPPGAKKPD 99
Query: 404 QPAAGPLKQIFE 439
P A +K++ +
Sbjct: 100 DPVANAMKEMMD 111
>SB_16908| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -3
Query: 423 NGPAAGCSGFVSVGGFDSDGFAMSGAALATPVVLVASA 310
N G G SVGG ++DG G A V+ V +A
Sbjct: 104 NTDGGGAGGSTSVGGAETDGGGADGGAATGTVLEVGTA 141
>SB_11994| Best HMM Match : ERM (HMM E-Value=0.28)
Length = 465
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/72 (23%), Positives = 28/72 (38%)
Frame = +2
Query: 224 SLFWCTKFSIYFLNLLQPNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPE 403
+ F +F+I L+ + + A AT A P P PP KP+
Sbjct: 241 TFFQLDEFNIVKTFLVSQLEKKLEEAKSMAAATPPPLCAPPPPPPPPPPPPPPPGAKKPD 300
Query: 404 QPAAGPLKQIFE 439
P A +K++ +
Sbjct: 301 DPVANAMKEMMD 312
>SB_34508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +2
Query: 305 KPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQ 457
KPAE A P KP E P T+ + +Q A KQ+ + SP++Q
Sbjct: 132 KPAEKPPKPAAAKE-PVPVKP-EPKPETKPEAKQEAKPEAKQVTKPSPIVQ 180
>SB_13074| Best HMM Match : Fz (HMM E-Value=5.3e-17)
Length = 377
Score = 27.9 bits (59), Expect = 9.4
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Frame = -3
Query: 429 CFNGPAAGCSGFV---SVGGFDSDGF---AMSGAALATPVVLVASAGFSVD*APGLFGCK 268
C P C+G V S+ G G+ +M L P+ L G + A GLF
Sbjct: 143 CDKLPEGNCNGTVDANSISGICFVGYKNPSMRAGFLLAPLGLDLVIG-GMFLAKGLFTLF 201
Query: 267 RFRK*MENFVHQKRDQKAPATVDRSGFVGY 178
+ RK NF+ + K T+ R GF +
Sbjct: 202 KLRKSNPNFLSNRASIKIKETIMRVGFFAF 231
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,338,419
Number of Sequences: 59808
Number of extensions: 526990
Number of successful extensions: 1917
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1879
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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