Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30493
(752 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical pr... 31 0.66
U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta p... 31 0.66
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 31 0.88
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 30 1.5
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81097-3|CAB03167.1| 296|Caenorhabditis elegans Hypothetical pr... 30 2.0
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 2.0
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 30 2.0
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL032637-4|CAA21619.2| 534|Caenorhabditis elegans Hypothetical ... 29 2.7
AF000197-5|AAB52900.3| 579|Caenorhabditis elegans Hypothetical ... 29 2.7
Z81461-1|CAB03833.1| 944|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81042-3|CAB02794.2| 660|Caenorhabditis elegans Hypothetical pr... 29 3.5
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 29 3.5
AF106584-2|AAC78222.2| 316|Caenorhabditis elegans Hypothetical ... 29 3.5
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 29 3.5
Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical pr... 29 4.7
U21323-11|AAA62556.1| 292|Caenorhabditis elegans Hypothetical p... 29 4.7
AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical ... 29 4.7
AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical ... 29 4.7
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 28 6.2
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 28 6.2
AC006744-1|AAF60506.2| 328|Caenorhabditis elegans Serpentine re... 28 6.2
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z81544-2|CAB04434.1| 342|Caenorhabditis elegans Hypothetical pr... 28 8.2
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 28 8.2
AL132902-9|CAC14424.1| 455|Caenorhabditis elegans Hypothetical ... 28 8.2
AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical ... 28 8.2
AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen prot... 28 8.2
>Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical
protein ZK1058.2 protein.
Length = 809
Score = 31.5 bits (68), Expect = 0.66
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -2
Query: 217 GACDC*PLWFCWLLFCPWGLKKLLICDGRFCHGAGLCV 104
G C C P W CP L +G+ C+G G C+
Sbjct: 587 GKCICAPGWTGRACECPISTDSCLSANGKICNGKGECI 624
>U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta
pat-3 protein.
Length = 809
Score = 31.5 bits (68), Expect = 0.66
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -2
Query: 217 GACDC*PLWFCWLLFCPWGLKKLLICDGRFCHGAGLCV 104
G C C P W CP L +G+ C+G G C+
Sbjct: 587 GKCICAPGWTGRACECPISTDSCLSANGKICNGKGECI 624
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 31.1 bits (67), Expect = 0.88
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +2
Query: 299 TEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQG-IAGAV 475
T P + T+G S+ + P+ +P T P AGP I PV +GAV
Sbjct: 2220 TVVPVSSAPTSGAVSSTTNTPSPTNQSPVTLPPPSVATAGPTGPILTVVPVSSAPTSGAV 2279
Query: 476 KKIQT 490
T
Sbjct: 2280 SSTAT 2284
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 272 QPNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAA 415
+P +P S E PA+ + + P ++PS S P +T P P++
Sbjct: 564 EPAKPSMPSGESPAQPEPSIPAVNPEPSPSQPSSSG-PIQTAPPSPSS 610
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/75 (29%), Positives = 31/75 (41%)
Frame = +2
Query: 272 QPNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSPV 451
QP + + TE EA + T A+ P++A+P P P K E +P
Sbjct: 29 QPEQAAPEPTED-WEAQADTSPAAVQPEVAEPVAVQESAPVAPVSATEAPKK---EPTPE 84
Query: 452 LQGIAGAVKKIQTTV 496
+A KK Q TV
Sbjct: 85 EDLVAPLAKKFQRTV 99
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical
protein B0379.7 protein.
Length = 409
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +2
Query: 293 QSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSP 448
+++E AT T+ +S + K S S+P T EQPAA P +Q+ + +P
Sbjct: 19 KNSENGKNAT-TSQRSSRSTRSTKSSRSSPKTVPVTEQPAAAPPQQLEQPTP 69
>Z81097-3|CAB03167.1| 296|Caenorhabditis elegans Hypothetical
protein K07A1.5 protein.
Length = 296
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 287 GAQSTE--KPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAG 418
GA++ E + +EA + + SAAP P+E P P+ P AG
Sbjct: 48 GAKTPEGKEGSEAGTPSAAGSAAPTAPAPAEGAAPAAAAPKPPMAG 93
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +2
Query: 275 PNR-PGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSPV 451
P+R P + +PAE + + P IA PS PP P P A L+Q P
Sbjct: 477 PSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPPA--LEQEISGPPT 534
Query: 452 LQ 457
++
Sbjct: 535 VR 536
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +2
Query: 272 QPNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGP 421
+P P ++ T P + ++ APDI K + PP T P P
Sbjct: 261 KPPTPTSRPTSAPTIPPQPSANSTRAPDIGKTLSTQPPRRTPQPHPKPPP 310
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 275 PNR-PGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKP--EQPAAGP 421
P+R P + +PAE + + P IA PS PP P EQ +GP
Sbjct: 470 PSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPALEQEISGP 521
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
protein ZK593.5 protein.
Length = 1326
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +2
Query: 284 PGAQSTEKPAEATSTTGVASAAPDIAKPSES---NPPTETKPEQP 409
P QS P +A++TT S P ++KP +S + P E P++P
Sbjct: 175 PRRQSLAPPKKASTTTAPVSK-PSLSKPRQSLAPSKPAEVTPQKP 218
>AL032637-4|CAA21619.2| 534|Caenorhabditis elegans Hypothetical
protein Y43F8C.4 protein.
Length = 534
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Frame = +2
Query: 275 PNRPGAQST------EKPAEATSTTGVASAAPDIAKPSESNPPTE 391
P RP ST P AT T GV AAP ++P+ + PP +
Sbjct: 104 PRRPAGASTLDDLFGTAPRAATVTPGVTVAAPAASQPTATAPPPD 148
>AF000197-5|AAB52900.3| 579|Caenorhabditis elegans Hypothetical
protein T21G5.1 protein.
Length = 579
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +2
Query: 308 PAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAG-PLKQIFENSPVLQGIAGAVKKI 484
P +T G + + A P + PP E KP++P P+ QI Q G + ++
Sbjct: 28 PGNGITTGGSREGSKESANPPGTPPPPEEKPKEPMVDVPVVQITPEIKGCQFYHGIIPRV 87
Query: 485 QTTVN 499
++
Sbjct: 88 DAELS 92
>Z81461-1|CAB03833.1| 944|Caenorhabditis elegans Hypothetical
protein C04F12.1 protein.
Length = 944
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +2
Query: 350 PDIAKPS-ESNPPTETKPEQPAAGPL--KQIFENSPVLQGIAGAVKK-IQTTVNN 502
P++++ S SNPPT + E+P P+ K +FE P Q A A K ++ T N+
Sbjct: 39 PELSRVSVSSNPPTPSAIEKPVPLPVPSKPLFEYEPPAQLEALAKNKPVKVTTNS 93
>Z81042-3|CAB02794.2| 660|Caenorhabditis elegans Hypothetical
protein C27H6.3 protein.
Length = 660
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 341 SAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENS 445
S P AK + PPTE + P P K+I ENS
Sbjct: 388 SIMPSFAKLIDVAPPTEAEFNNPCLFPEKRIAENS 422
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 290 AQSTEKPAEATSTTGVASAAPD--IAKPSESNPPTETKPEQPAAGP 421
+ T P E TS+T + AP + P+ PP +P+QP GP
Sbjct: 675 SSETSTPGEPTSSTPSDTPAPSTSVPPPTSVQPP---QPQQPPQGP 717
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +2
Query: 275 PNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESN-PPTETKPEQPAAGP 421
P +P S P +T +A AAP P+ S PT T P PA P
Sbjct: 289 PPKPAKISVADPPPST----IAPAAPSAPAPAPSQLNPTSTSPTMPAIAP 334
>AF106584-2|AAC78222.2| 316|Caenorhabditis elegans Hypothetical
protein F54A5.3a protein.
Length = 316
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 437 ENSPVLQGIAGAVKKIQTTVNNPVSQEILKWLKRLNLSKRREASF 571
E +PV+ + G VKK V+ +S +++K +K+ L +R SF
Sbjct: 63 EINPVVSRVIGEVKKENFPVDINISSKMIKIIKQSRLIQRHPFSF 107
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 302 EKPAEATSTTGVASAAPDIAKPSESNPPT 388
E P ++ S +G A+AA A+PSES+ T
Sbjct: 742 EPPTQSASASGAAAAAAASAQPSESSSAT 770
>Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical
protein Y57G11A.2 protein.
Length = 640
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 275 PNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNP-PTETKPEQPAAGP 421
PN + P + T V P++ +P+E P PT+++ + P P
Sbjct: 520 PNPIPEDTVPGPEDTTPGPAVTEEIPEVPEPTEEPPTPTDSEIDSPTPAP 569
>Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical
protein Y57G11A.2 protein.
Length = 640
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 275 PNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNP-PTETKPEQPAAGP 421
PN + P + T V P++ +P+E P PT+++ + P P
Sbjct: 520 PNPIPEDTVPGPEDTTPGPAVTEEIPEVPEPTEEPPTPTDSEIDSPTPAP 569
>Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical
protein F58A4.1 protein.
Length = 254
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 296 STEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGP 421
ST P +STT A++ P + + + T+PE P A P
Sbjct: 118 STVTPTTRSSTTTTATSTPTSSSKATTTSAQITQPEIPQAAP 159
>U21323-11|AAA62556.1| 292|Caenorhabditis elegans Hypothetical
protein C45G9.4 protein.
Length = 292
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = +2
Query: 296 STEKPAEATSTTGVASAAPDIAKPSESNPPTETKPE-QPAAGPLKQ---IFENSPVLQGI 463
S +KP ++ A A + +P PPT KPE P + PL Q + +P
Sbjct: 95 SLQKPIQSGIVDADAKAKTVVPRPPTPIPPTGVKPEPAPRSEPLYQPRSVSSTTPRTSAT 154
Query: 464 AGAVKKIQT 490
G +++ T
Sbjct: 155 TGTTEQMVT 163
>AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical
protein Y63D3A.6b protein.
Length = 752
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 293 QSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGA 472
+++E P EA +T V KP E N P + K + G K + +N+P A
Sbjct: 501 EASEAPEEAAAT--VEEEEVKKRKPWEKNKPKQKKKKAQGQGQKKFVKKNAPASPDTEKA 558
Query: 473 VKK 481
+K+
Sbjct: 559 LKE 561
>AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical
protein Y63D3A.6a protein.
Length = 579
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 293 QSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGA 472
+++E P EA +T V KP E N P + K + G K + +N+P A
Sbjct: 501 EASEAPEEAAAT--VEEEEVKKRKPWEKNKPKQKKKKAQGQGQKKFVKKNAPASPDTEKA 558
Query: 473 VKK 481
+K+
Sbjct: 559 LKE 561
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Frame = +2
Query: 275 PNRPGAQSTEKPAEATSTTGVA-SAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSPV 451
PN+PG P+ S+TG S P +PS + + P+ GP N +
Sbjct: 1375 PNKPGPNGPSNPSVPESSTGGGPSPGPSPNEPSNPSILGPSTGGDPSPGPSPNEPSNPSI 1434
Query: 452 LQGIAGAVKKIQTTVNNPVSQEI 520
L G + N P + +
Sbjct: 1435 LGPSTGGDPSPGPSPNGPSNPSV 1457
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +2
Query: 293 QSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFE 439
QSTE+P + S + V+ P PP + K +P K++ E
Sbjct: 347 QSTEEPTTSDSNSQVSEDIPPPKNKESGTPPLKEKTPEPIPEEPKKVEE 395
>AC006744-1|AAF60506.2| 328|Caenorhabditis elegans Serpentine
receptor, class t protein52 protein.
Length = 328
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 461 IAGAVKKIQTTVNNPVSQEILKWLKRLN 544
+ G I T+N V QE+L+W++R N
Sbjct: 279 VHGCPAIIYLTMNKTVRQEVLRWIRRKN 306
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +2
Query: 272 QPNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPA--AGP 421
+P +PGA A ++ + P +P + PP P+ PA AGP
Sbjct: 123 KPGKPGAPGAPGAAGKGASAPCEAKTPPPCQPCPAGPPGPPGPDGPAGPAGP 174
>Z81544-2|CAB04434.1| 342|Caenorhabditis elegans Hypothetical
protein F49C5.6 protein.
Length = 342
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = -3
Query: 588 TVYWQQNDASLLLLRFSLFNHFRISWLTGLLTVVWIFLTAPAMPCRTGLFSKICFNGPAA 409
T YW AS+ + F++ HF WL ++T +W + + P T +F+ GP
Sbjct: 96 TFYWGCFGASMAV--FAV--HFVYRWL--VVTEIWFWFSIPMWYGVTWIFTGYVLAGPNE 149
Query: 408 GCSGFVS 388
S F+S
Sbjct: 150 FTSRFIS 156
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 27.9 bits (59), Expect = 8.2
Identities = 21/80 (26%), Positives = 32/80 (40%)
Frame = +2
Query: 260 LNLLQPNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFE 439
LNLLQP + +ST+ + A+ +K S ++ P + Q L I
Sbjct: 880 LNLLQPRIQNQPRRSRTVSNSSTSNIPQASASDSKESNTSVP-HSSQRQILVPELMDIHP 938
Query: 440 NSPVLQGIAGAVKKIQTTVN 499
S L + A+ I VN
Sbjct: 939 ISATLWNVIAALPSIFYRVN 958
>AL132902-9|CAC14424.1| 455|Caenorhabditis elegans Hypothetical
protein Y71A12B.10 protein.
Length = 455
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 344 AAPDIAKPSESNPPTETKPEQPAAGP 421
AAP PSE PP+ T Q GP
Sbjct: 356 AAPQSTVPSEKTPPSHTPSPQSLRGP 381
>AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical
protein Y59A8A.3 protein.
Length = 676
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +2
Query: 299 TEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVK 478
T+K + A+ AP A P+ N PT T +QP+ P +Q V+
Sbjct: 64 TKKQQQTGKKAQDAAPAPASAAPAAPNAPTPTAQQQPSPKASAAPIPEKPEIQ-----VQ 118
Query: 479 KIQTT 493
K+++T
Sbjct: 119 KVEST 123
>AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen protein
109 protein.
Length = 291
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +2
Query: 275 PNRPGAQSTEKPAEATSTTGVASAAPDIAKPSESNPPTETKPEQP 409
P RPG+ T P +G + A + + E P ++ P P
Sbjct: 163 PGRPGSPGTPGPVGPNGASGDSGAPGNDGEKGEPGRPAQSTPSTP 207
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,835,810
Number of Sequences: 27780
Number of extensions: 397729
Number of successful extensions: 1501
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1494
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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