Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30491
         (779 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   2.7  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   6.3  
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      21   8.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/42 (16%), Positives = 19/42 (45%)
 Frame = -2

Query: 487 FHYQTLL*LYLEAFLVCFGLFLYSILIIPMFCVSQFLFHLFY 362
           +H+     ++    L C     +++ ++ + C+  F  HL +
Sbjct: 167 YHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLF 208


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/38 (26%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +2

Query: 242 HSTVD--KLI*VIYIILMNSLIKI*KFYQKNPEVEIET 349
           H T++  K++ + ++IL   +  + +++QKN    +ET
Sbjct: 455 HQTIELVKMLKIRFVILNKQINNLIEYFQKNKIGPVET 492


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/38 (26%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +2

Query: 242 HSTVD--KLI*VIYIILMNSLIKI*KFYQKNPEVEIET 349
           H T++  K++ + ++IL   +  + +++QKN    +ET
Sbjct: 180 HQTIELVKMLKIRFVILNKQINNLIEYFQKNKIGPVET 217


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = -1

Query: 683 GRIWDWKIPPFQMELEPIRRETHVVPRLNLWLWSSKPSISVKTAYGSLV 537
           G++       FQM L+ +   + V    +LW+  SK    V  A G  V
Sbjct: 240 GKVASQLAEDFQMALKHVGPSSQVADYRSLWMLLSKLIRDVGNASGYTV 288


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 114 KASLLQNEHVSINLLLL*NGTW*SFNK 34
           K S  + EH+   ++++  G W SFN+
Sbjct: 14  KDSKWRGEHMVGTIVVVVRGVWVSFNQ 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,178
Number of Sequences: 336
Number of extensions: 2990
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)