Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30491
         (779 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92832-4|CAB07373.1|  488|Caenorhabditis elegans Hypothetical pr...    31   0.70 
AL117207-9|CAB60400.1|  252|Caenorhabditis elegans Hypothetical ...    30   1.6  
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U55365-5|AAN84867.2|  350|Caenorhabditis elegans Serpentine rece...    29   4.9  
AL021474-4|CAD54164.1|  445|Caenorhabditis elegans Hypothetical ...    28   6.5  
Z77652-10|CAI70404.1|  307|Caenorhabditis elegans Hypothetical p...    28   8.6  
AC026301-7|AAK68900.2| 1142|Caenorhabditis elegans Hypothetical ...    28   8.6  

>Z92832-4|CAB07373.1|  488|Caenorhabditis elegans Hypothetical
           protein F31D4.5 protein.
          Length = 488

 Score = 31.5 bits (68), Expect = 0.70
 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 7/121 (5%)
 Frame = +2

Query: 65  KRSKLIETCSFCNKEAFRENERLRNSHTITNNVSVTIENKSFTAIIKIDTNQNNI----- 229
           +R KLI T     K+   + + ++N   +TN +  T+E +  +   K +  Q N+     
Sbjct: 253 EREKLIRT----TKKLKDDLQNVKNELKMTNEMKKTLEQEKMSLNSKTEHLQANMESLNI 308

Query: 230 -KSNIHSTVDKLI*VIYIILM-NSLIKI*KFYQKNPEVEIETLRLVIKQMKKKLRNAKHW 403
            K  IH  + +++     +L+ N  +   K    N  +EIET R  I   K+K+ N    
Sbjct: 309 EKEKIHEQLQEIVREREKVLIDNQNLSTDKCQLNNRLMEIETSRNCIMTEKEKIENLLKM 368

Query: 404 N 406
           N
Sbjct: 369 N 369


>AL117207-9|CAB60400.1|  252|Caenorhabditis elegans Hypothetical
           protein Y60A3A.15 protein.
          Length = 252

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = -2

Query: 451 AFLVCFGLFLYSILIIPMFCVSQFLFHLFYH*P*GFYLHFWVLLIK 314
           +F + F  F+YSI+I+P    S F    F+H    F++ FWVL +K
Sbjct: 14  SFNLYFKCFIYSIVILP----SNFSIARFFH---CFWVLFWVLQLK 52


>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
           protein C18C4.5b protein.
          Length = 1046

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +1

Query: 241 TFNCRQTDISDIHNTNELLNKDIEILSKEPRSGDRNLKVSD 363
           T +  +  IS++  TN+LL  D++ LSK   S D+ LK ++
Sbjct: 814 TISDLEDKISELLKTNDLLALDVQKLSKSLDSKDQQLKEAE 854


>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
           protein C18C4.5a protein.
          Length = 1022

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +1

Query: 241 TFNCRQTDISDIHNTNELLNKDIEILSKEPRSGDRNLKVSD 363
           T +  +  IS++  TN+LL  D++ LSK   S D+ LK ++
Sbjct: 814 TISDLEDKISELLKTNDLLALDVQKLSKSLDSKDQQLKEAE 854


>U55365-5|AAN84867.2|  350|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 11 protein.
          Length = 350

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
 Frame = -2

Query: 502 HLQRHFHYQTLL*--LYLEAFLVCFGLFLYSILIIPMFCVSQFLFH 371
           H Q H  Y   L   LYLE FL       +S     M C  QF F+
Sbjct: 11  HFQNHTEYFPYLKNYLYLEFFLYIIDTIQFSFFFWVMLCAKQFHFN 56


>AL021474-4|CAD54164.1|  445|Caenorhabditis elegans Hypothetical
           protein Y32F6A.5 protein.
          Length = 445

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 205 LNDSCKTFIFNGNRNIICNSM 143
           L D     ++NGN ++ICN+M
Sbjct: 350 LKDGYNVIVYNGNEDLICNTM 370


>Z77652-10|CAI70404.1|  307|Caenorhabditis elegans Hypothetical
           protein C06B3.12 protein.
          Length = 307

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -2

Query: 460 YLEAFLVCFGLFLYSILIIPMF--CVSQFLFHLF 365
           YL+ +   F + L ++++IP F  C   F ++LF
Sbjct: 123 YLKWYCFAFSMMLLTVMLIPFFSACAGSFDYYLF 156


>AC026301-7|AAK68900.2| 1142|Caenorhabditis elegans Hypothetical
            protein Y54F10BM.9 protein.
          Length = 1142

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -3

Query: 309  YIFIKEFISIMYITYISLSTVE 244
            YIF+KEF + +Y+ Y+S   V+
Sbjct: 1053 YIFLKEFRNEIYVVYVSSQAVD 1074


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,500,901
Number of Sequences: 27780
Number of extensions: 272743
Number of successful extensions: 772
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)