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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30490
         (847 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    28   0.41 
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    25   2.9  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   6.7  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   6.7  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.9 bits (59), Expect = 0.41
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 826 PKAVKGGWGHPPG*NQELRPQVPTGNPGAMEPQSQ 722
           P    G +  PPG    +RPQ+P G    M+P  Q
Sbjct: 211 PPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQ 245


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = +1

Query: 619 LIFYHHNGITWSVTIPWGRIGHPQADPMVLHRSRPGFAVPWP 744
           ++ YHH          W R+      P +L  SRPG   P P
Sbjct: 298 ILNYHHRNSDTHEMSEWIRVVFLIWLPFILRMSRPGEPYPHP 339


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 690  LWVPNPPPGDGYRPGN 643
            LW P+ PPG    PG+
Sbjct: 1147 LWYPDEPPGQQPSPGS 1162


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = +3

Query: 663 PLGEDWAPTGGPHGIT---PVQAWLCGSMAPGLP 755
           PLG    P GGP G+    P+   L  SM  GLP
Sbjct: 563 PLGLGMRPQGGPLGLPSHHPLHPSLGLSMGLGLP 596



 Score = 23.4 bits (48), Expect = 8.8
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 769 PQVPTGNPGAMEPQSQAWTGVIPWGPPVGA 680
           PQVP    G+    S    G++P  PP G+
Sbjct: 596 PQVPQPPAGSSLNLSHPSAGMVPQPPPPGS 625


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 937,973
Number of Sequences: 2352
Number of extensions: 21612
Number of successful extensions: 82
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89718867
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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