Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30490
         (847 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060485-1|AAL25524.1|  696|Drosophila melanogaster SD09360p pro...    31   2.0  
AE014298-2787|AAF48900.2| 2030|Drosophila melanogaster CG32542-P...    31   2.0  
J03177-1|AAA28535.1|  510|Drosophila melanogaster protein ( D.me...    30   4.6  
BT023936-1|ABB36440.1|  510|Drosophila melanogaster RE06859p pro...    30   4.6  
BT010029-1|AAQ22498.1|  426|Drosophila melanogaster RE03865p pro...    30   4.6  
AE014297-4241|AAF56798.1|  510|Drosophila melanogaster CG10002-P...    30   4.6  
AE014298-2576|AAF48733.1|  577|Drosophila melanogaster CG12432-P...    29   8.0  

>AY060485-1|AAL25524.1|  696|Drosophila melanogaster SD09360p
           protein.
          Length = 696

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = -1

Query: 835 PGYPKAVKGGWGHPPG*NQELRPQVPTGNPGAMEPQSQAWTGVIPWGPPVG 683
           PG+P    G  GHP       +PQ P G   A+ PQ+       P GPP+G
Sbjct: 389 PGHP----GQQGHPGQPPSGFQPQPPPGAFQALPPQAYQAMQAGPPGPPMG 435


>AE014298-2787|AAF48900.2| 2030|Drosophila melanogaster CG32542-PA
            protein.
          Length = 2030

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = -1

Query: 835  PGYPKAVKGGWGHPPG*NQELRPQVPTGNPGAMEPQSQAWTGVIPWGPPVG 683
            PG+P    G  GHP       +PQ P G   A+ PQ+       P GPP+G
Sbjct: 1723 PGHP----GQQGHPGQPPSGFQPQPPPGAFQALPPQAYQAMQAGPPGPPMG 1769


>J03177-1|AAA28535.1|  510|Drosophila melanogaster protein (
           D.melanogaster forkhead protein (fkh) gene, complete
           cds. ).
          Length = 510

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = -1

Query: 811 GGWGHPPG*NQELRPQVPTGNPGAMEPQSQAWTGVIPWGPPVGAQSS 671
           GG G PP  N    P  PT N G+M P +++   +   G PVG  SS
Sbjct: 37  GGGGPPPPSNNN--PN-PTSNGGSMSPLARSAYTMNSMGLPVGGMSS 80


>BT023936-1|ABB36440.1|  510|Drosophila melanogaster RE06859p
           protein.
          Length = 510

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = -1

Query: 811 GGWGHPPG*NQELRPQVPTGNPGAMEPQSQAWTGVIPWGPPVGAQSS 671
           GG G PP  N    P  PT N G+M P +++   +   G PVG  SS
Sbjct: 37  GGGGPPPPSNNN--PN-PTSNGGSMSPLARSAYTMNSMGLPVGGMSS 80


>BT010029-1|AAQ22498.1|  426|Drosophila melanogaster RE03865p
           protein.
          Length = 426

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = -1

Query: 811 GGWGHPPG*NQELRPQVPTGNPGAMEPQSQAWTGVIPWGPPVGAQSS 671
           GG G PP  N    P  PT N G+M P +++   +   G PVG  SS
Sbjct: 37  GGGGPPPPSNNN--PN-PTSNGGSMSPLARSAYTMNSMGLPVGGMSS 80


>AE014297-4241|AAF56798.1|  510|Drosophila melanogaster CG10002-PA
           protein.
          Length = 510

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = -1

Query: 811 GGWGHPPG*NQELRPQVPTGNPGAMEPQSQAWTGVIPWGPPVGAQSS 671
           GG G PP  N    P  PT N G+M P +++   +   G PVG  SS
Sbjct: 37  GGGGPPPPSNNN--PN-PTSNGGSMSPLARSAYTMNSMGLPVGGMSS 80


>AE014298-2576|AAF48733.1|  577|Drosophila melanogaster CG12432-PA
           protein.
          Length = 577

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
 Frame = -1

Query: 835 PGYPKAVKGGWGHP----PG*NQELRPQVPTGNPGAME 734
           P YP  + GG G P    PG  Q+L P+ P  +P A+E
Sbjct: 104 PDYPPPITGGGGSPVNTTPGRRQQL-PRYPDPDPDAIE 140


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,735,015
Number of Sequences: 53049
Number of extensions: 938781
Number of successful extensions: 2122
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2114
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)