Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30488
         (364 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   1.3  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   1.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   2.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   2.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   2.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   3.9  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   5.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   6.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   6.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    20   9.0  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    20   9.0  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      20   9.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   9.0  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    20   9.0  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +1

Query: 166 NNPVKPRDSEVVEETKSEQEK 228
           +NP+ P +SE +   KSE+E+
Sbjct: 103 HNPLTPPNSEPLVSPKSEKEE 123


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 13/47 (27%), Positives = 18/47 (38%)
 Frame = +1

Query: 52  PTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKPRDS 192
           P + KP+    G       NSPV   + G    +  + N P K   S
Sbjct: 25  PLDMKPDASTLGQFSPQGPNSPVSFSMGGHGSLLSPSGNTPNKSSTS 71


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 15/65 (23%), Positives = 25/65 (38%)
 Frame = -2

Query: 255 LYWQQNDASLLLLRFSLFNHFRISWLHWIIDCCLDFFNCSCDALQNWAVLENLF*WPGCG 76
           L W+    + + +   LF    + W+ + ++  L   N +   L  W VL  L       
Sbjct: 122 LIWKSYKRTQIFITCELF-FVILLWISFFLNFMLHCNNTTWRCLYRWIVLYTLSKMSQVM 180

Query: 75  LFWFC 61
           L  FC
Sbjct: 181 LIQFC 185


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 228  LLLLRFSLFNHFRISW 181
            LLL+ +S+FN   +SW
Sbjct: 1017 LLLVIYSVFNMNNVSW 1032


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 228  LLLLRFSLFNHFRISW 181
            LLL+ +S+FN   +SW
Sbjct: 1017 LLLVIYSVFNMNNVSW 1032


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 213  FSLFNHFRISWLHWII 166
            FS+F  F ++ LH+++
Sbjct: 1414 FSMFERFHVNKLHFLL 1429


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 208 TKSEQEKGGVILLPVQVTAVTVEMVGI 288
           +K+  E    I++PV +T+V   M+G+
Sbjct: 493 SKTLAESPIFIIIPVTLTSVCYFMIGL 519


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 156  LDFFNCSCDALQNWAVLENLF 94
            LDF N    A  +WA  +N F
Sbjct: 1437 LDFENLIVKAHDSWADFDNQF 1457


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 189 ISWLHWIIDCCLDF 148
           I+WL+   DCC+ +
Sbjct: 548 IAWLYVDNDCCIRY 561


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 175 VKPRDSEVV 201
           VKPRD E+V
Sbjct: 183 VKPRDGEIV 191


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 168 IDCCLDFFNCSCDALQ 121
           +DC L+   CS D L+
Sbjct: 49  VDCLLEKGRCSPDGLE 64


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = -2

Query: 87  PGCGLFWF 64
           PG G+FW+
Sbjct: 279 PGVGVFWY 286


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 8/30 (26%), Positives = 13/30 (43%)
 Frame = -3

Query: 302 TDVVIIPTISTVTAVTCTGNKMTPPFSCSD 213
           +D   +  +  +  V   GN + PPF   D
Sbjct: 60  SDGTAVGDVPGLRQVLANGNLVFPPFRAED 89


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 208 TKSEQEKGGVILLPVQVTAVTVEMVGI 288
           +K+  E    I++PV +T+V   M+G+
Sbjct: 493 SKTLAESPIFIIIPVILTSVCYFMIGL 519


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.310    0.129    0.353 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,451
Number of Sequences: 336
Number of extensions: 1524
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7404950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.4 bits)