Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30488
(364 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0093 - 27648656-27648736,27649034-27649147,27649229-276492... 32 0.12
09_04_0070 + 14308446-14308511,14308844-14309005,14309420-143094... 29 0.85
09_04_0373 - 17037945-17040641 29 1.1
12_02_0304 + 17112677-17113195 29 1.5
12_02_0161 + 14659338-14659467,14659553-14659888,14660034-146602... 28 2.0
06_01_0397 + 2855273-2855347,2855515-2855606,2856317-2856347,285... 28 2.0
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344... 28 2.0
03_02_0146 + 5916692-5917931,5918198-5918261,5918836-5919057,591... 28 2.0
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704... 28 2.6
09_04_0347 + 16887182-16888504 28 2.6
06_01_1013 - 7931756-7935109 28 2.6
02_01_0210 + 1402037-1402066,1402449-1402544,1402611-1403033,140... 28 2.6
09_06_0137 - 21080263-21081894 27 3.4
03_03_0262 + 15968884-15969687 27 3.4
02_05_0442 - 29044736-29046604 27 3.4
12_01_0790 + 7216452-7216489,7216664-7216722,7217268-7218750,721... 27 4.5
12_01_0219 - 1651833-1651987,1652172-1652471,1652889-1652967,165... 27 4.5
11_01_0420 - 3230936-3231710,3232265-3233885,3234411-3234834 27 4.5
09_02_0523 + 10196272-10196375,10196551-10197488,10200247-102008... 27 4.5
03_06_0722 - 35751490-35754357 27 4.5
12_01_0419 - 3316866-3318172,3318249-3318360 27 6.0
10_08_0452 - 18038182-18038253,18038338-18038415,18038502-180385... 27 6.0
09_04_0668 + 19325747-19325785,19325825-19325881,19326361-193264... 27 6.0
05_07_0226 - 28515052-28515064,28515426-28515502,28515610-285157... 27 6.0
02_02_0486 - 10856842-10858104 27 6.0
01_05_0082 - 17972276-17973268 27 6.0
10_02_0014 - 4234924-4234986,4235001-4235195 26 7.9
04_04_0871 + 28898262-28898534,28899552-28900015,28900242-289003... 26 7.9
>05_07_0093 -
27648656-27648736,27649034-27649147,27649229-27649288,
27649464-27649687,27649799-27649886,27650326-27650532,
27650566-27650784,27650903-27651001,27651439-27651504,
27651654-27651737,27651829-27651888,27652041-27652325,
27652789-27652836,27652988-27653034,27653442-27653556,
27653958-27654032,27654227-27654298,27654944-27656124,
27656613-27656757
Length = 1089
Score = 32.3 bits (70), Expect = 0.12
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +1
Query: 121 LQGIAGAVKKIQTTVNNPVKPRDSEVVEETKSEQEKG 231
LQ IAGAV KI +V N K DS + E K + E+G
Sbjct: 13 LQDIAGAVNKISESVKNIEKNFDSALGLEEKRDDEEG 49
>09_04_0070 +
14308446-14308511,14308844-14309005,14309420-14309473,
14310009-14310073,14310391-14310459,14310590-14310767,
14311085-14311231,14311316-14311432,14311507-14311619,
14311703-14311781,14311892-14312020
Length = 392
Score = 29.5 bits (63), Expect = 0.85
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 1 GVASAAPDIAK-PSESNPPTETKPEQPAA 84
G +S+AP +K PS PPT+T P PA+
Sbjct: 79 GSSSSAPATSKAPSNQAPPTQTVPAAPAS 107
>09_04_0373 - 17037945-17040641
Length = 898
Score = 29.1 bits (62), Expect = 1.1
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = -3
Query: 275 STVTAVTCT---GNKMTPPFSCSDLVSSTTSESLGFTGLLTVVWIFLTAPAMPCRTGLFS 105
S A +CT G+ + P +C + SS+ S+ + L + F T P TG+
Sbjct: 319 SVTVAGSCTPGDGSTLASPAACQNNDSSSGGASVSYIALKPLTSYFATKFDAPTNTGVNK 378
Query: 104 KICFNGPAAGCSGFVSVGGFDSDGFAMS 21
C A C+ + GF D ++S
Sbjct: 379 TAC----RALCTASCACLGFFHDSVSLS 402
>12_02_0304 + 17112677-17113195
Length = 172
Score = 28.7 bits (61), Expect = 1.5
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +1
Query: 4 VASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVK 180
+A + P + PS+ T+P P+ G Q + + + G + + T +NNP K
Sbjct: 60 IAPSPPPVVAPSQPLVVAPTQPPTPSGG--SQCLRENVIALNVCGQL-DLSTLLNNPTK 115
>12_02_0161 +
14659338-14659467,14659553-14659888,14660034-14660266,
14660344-14660805,14660887-14661719,14661802-14661972,
14662052-14662352
Length = 821
Score = 28.3 bits (60), Expect = 2.0
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Frame = +1
Query: 4 VASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSP-----VLQGIAGAVKKIQTTVN 168
V P +++P+E PP + GP + +SP L IA ++ I+TT
Sbjct: 473 VVKMTPHLSRPTELTPPKSKLSIEAPRGPALSV-PHSPGGADMDLADIAQSLALIKTTTK 531
Query: 169 NPVKPRDSEVVEETKSEQEKGGVILLP 249
+ P +V+ K E+ KG V LP
Sbjct: 532 DDSSP---PLVKGQKRERGKGKVGELP 555
>06_01_0397 +
2855273-2855347,2855515-2855606,2856317-2856347,
2856687-2856830,2856935-2857162,2857374-2857487,
2857749-2858249
Length = 394
Score = 28.3 bits (60), Expect = 2.0
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +1
Query: 19 PDIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGA-VKKIQTTVNNPVKPRDSE 195
PD KP ++PP + KP + K+ SP Q A V+K + KP+D +
Sbjct: 318 PDQKKPVAASPPDQKKPVALSPPDHKKTVTPSPPDQKKPVARVQKAKAAGPPKAKPKDMK 377
Query: 196 VVEETKSEQ 222
++ K +Q
Sbjct: 378 GGQQKKQQQ 386
>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
29334956-29335045,29335120-29335155,29335222-29336553,
29337331-29337497,29337519-29337724,29337815-29338036,
29338332-29338381,29338754-29338870,29339471-29339551,
29339656-29339694,29340464-29340636,29340769-29340826,
29340934-29340987,29341066-29341613,29341695-29341755,
29342180-29342260,29342448-29342630,29342908-29343162,
29343304-29343423,29343497-29344901,29344988-29345085,
29345164-29345218,29345307-29345366,29346498-29346697
Length = 2077
Score = 28.3 bits (60), Expect = 2.0
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +1
Query: 19 PDIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKPRDSEV 198
P + P+ S+P KP +P P+K + +P+ Q + K +KPRD+
Sbjct: 1999 PTSSTPT-SSPAAAEKPAEPIVAPIKVL---TPISQDDQRQLYKWMLEEKRKIKPRDA-- 2052
Query: 199 VEETKSEQEK 228
E+ K EK
Sbjct: 2053 AEKKKINGEK 2062
>03_02_0146 +
5916692-5917931,5918198-5918261,5918836-5919057,
5919626-5919747,5920105-5920170,5920192-5920386,
5920480-5921057,5921818-5921968,5922465-5922715
Length = 962
Score = 28.3 bits (60), Expect = 2.0
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +1
Query: 16 APDIAKPSESNPPTETKPEQP-AAGPLKQIFE--NSPVLQGIAGAVKKIQTTVNNPVKP 183
+P++ +E+ T P G +K+I SP+ GAVKKI + +P+ P
Sbjct: 120 SPNLTGKAENGHSLATSGISPNCPGAVKKIHSLATSPISPNWPGAVKKIHSLATSPISP 178
>12_02_0118 -
13869237-13869307,13869375-13869465,13870321-13870440,
13870668-13870795,13871159-13871270,13871719-13871817,
13871918-13871992,13872099-13872320,13873177-13874034
Length = 591
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 13 AAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAV 144
A P A+P +PP ++P P A P + + P G G +
Sbjct: 61 APPPGARPFPGSPPPPSQPPPPFARPAAPVQQQPPPFGGPPGVM 104
>09_04_0347 + 16887182-16888504
Length = 440
Score = 27.9 bits (59), Expect = 2.6
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = +1
Query: 34 PSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKPRDSEVVEETK 213
PS++ PP P+ AA P + + +GA NP PR EV +++
Sbjct: 46 PSKTPPPANPNPKSAAAPP-SAVAAPASAAGSDSGAASDSPRAAGNPSGPRSIEVNSDSE 104
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -3
Query: 131 MPCRTGLFSKICFNGPAAGCSGFVSVGGF 45
+PCR K+C GP C+ +S F
Sbjct: 321 LPCRRHRCEKVCHTGPCGDCNVLISARCF 349
>02_01_0210 +
1402037-1402066,1402449-1402544,1402611-1403033,
1403126-1403215,1403330-1403401,1403851-1403980,
1404172-1404269
Length = 312
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 85 GPLKQIFENSPVLQGIAGAVKK 150
G +KQ+ E PV++G+ GA+K+
Sbjct: 264 GKVKQLGEKFPVIRGLLGAIKR 285
>09_06_0137 - 21080263-21081894
Length = 543
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 4 VASAAPDIAKPSESNPPTETKPEQPAAGP 90
+ AAP +A P E P E +PE PA P
Sbjct: 22 LCDAAPTLAPPPEPEPEPELEPE-PALAP 49
>03_03_0262 + 15968884-15969687
Length = 267
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 1 GVASAAPDIAKPSESNPPTETKPEQPAAGPL 93
G A+A P PS + P QP+AGP+
Sbjct: 176 GAAAATPPPPPPSSHHQQQPAFPPQPSAGPI 206
>02_05_0442 - 29044736-29046604
Length = 622
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 63 KTRTTRSRAIKTNFREQPSSARHRR 137
KT+TTR+ TN R PS +R RR
Sbjct: 66 KTKTTRTVIATTNGRAAPSQSRPRR 90
>12_01_0790 +
7216452-7216489,7216664-7216722,7217268-7218750,
7218828-7218892,7219023-7219080,7219152-7219262,
7219332-7219410,7219521-7219613,7219701-7219886
Length = 723
Score = 27.1 bits (57), Expect = 4.5
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +1
Query: 10 SAAPDIAKPSESNPPTETKPEQPAAGPL--KQIFENSPVLQGIAGAVKKIQTTVNNPVKP 183
S P +A+P +S + +PE P A PL K + +S + + + V +P P
Sbjct: 262 SHPPVVARPRDSPIASPPRPEPPVASPLGPKPLVASSRGPEPPVASPPVPEPPVASPPVP 321
Query: 184 RDSEVVEETK--SEQEKGGVILLPVQVTAVTVEMV 282
TK +E+ V P ++ A +E V
Sbjct: 322 EPPVASPRTKKDAEEPSESVQAEPTKLAAGEIEAV 356
>12_01_0219 -
1651833-1651987,1652172-1652471,1652889-1652967,
1653047-1653111,1653236-1653288,1653666-1654084
Length = 356
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 209 VSSTTSESLGFTGLLTVVWIFLTAPAMPCRTGL 111
+++TT+E+ GFT LL+VV + CR GL
Sbjct: 21 LTTTTAEAGGFTHLLSVVSSAFISFITDCRPGL 53
>11_01_0420 - 3230936-3231710,3232265-3233885,3234411-3234834
Length = 939
Score = 27.1 bits (57), Expect = 4.5
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +1
Query: 13 AAPDIAK-----PSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPV 177
A PD+ K P E N P + + P +QI++ Q +G K++ T+N
Sbjct: 338 AMPDVVKFIDPLPGERNQPAVVGVSKRSMEPAEQIYKGKSSAQS-SGEFKRLVQTLNE-- 394
Query: 178 KPRDSEV 198
KP S V
Sbjct: 395 KPPSSHV 401
>09_02_0523 +
10196272-10196375,10196551-10197488,10200247-10200896,
10201003-10201746
Length = 811
Score = 27.1 bits (57), Expect = 4.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 184 RDSEVVEETKSEQEKGGVILLPVQVTAVTVEMVGII 291
RDS++VE+ EQE I QV AV ++ +
Sbjct: 602 RDSKIVEKDDDEQEDSKTITESTQVMAVCSTLIATV 637
>03_06_0722 - 35751490-35754357
Length = 955
Score = 27.1 bits (57), Expect = 4.5
Identities = 16/75 (21%), Positives = 29/75 (38%)
Frame = +1
Query: 19 PDIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKPRDSEV 198
P P + P P PA E +L+G+ + + NP + D +
Sbjct: 155 PTAEAPRQRLPGAAASPA-PATNTTAAAVEPVVILKGLVKPMSQASIGPRNPSQNEDKDE 213
Query: 199 VEETKSEQEKGGVIL 243
E + E+E+ G ++
Sbjct: 214 DESEEEEEEEEGPVI 228
>12_01_0419 - 3316866-3318172,3318249-3318360
Length = 472
Score = 26.6 bits (56), Expect = 6.0
Identities = 18/72 (25%), Positives = 27/72 (37%)
Frame = +1
Query: 19 PDIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKPRDSEV 198
P +P + P E +PE P E +PV + A KPR S+
Sbjct: 343 PAAEEPPAAEPEQEPQPETPPVESETPAEEQAPVQEPPAADETPAAGEPEEQPKPRSSDS 402
Query: 199 VEETKSEQEKGG 234
+ + S +E G
Sbjct: 403 EDYSTSGEEGDG 414
>10_08_0452 -
18038182-18038253,18038338-18038415,18038502-18038579,
18039112-18039168,18039276-18039349,18039424-18039495,
18039609-18039670,18039861-18039962,18040378-18040490,
18040809-18040940,18041156-18041243,18041617-18041711,
18041793-18042023,18042567-18042680,18042765-18042866,
18043091-18043207,18043301-18044146
Length = 810
Score = 26.6 bits (56), Expect = 6.0
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 79 AAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKPRDSEVVEETKSEQE 225
A P K + P + GAV K + ++PVKP+ S ++ S E
Sbjct: 37 APSPKKLKTQPQPAAEADGGAVAKPEEKPHSPVKPKRSSSPTKSNSPGE 85
>09_04_0668 +
19325747-19325785,19325825-19325881,19326361-19326490,
19328303-19328352,19328645-19328741,19328834-19328902,
19328986-19329078,19329194-19329317,19329904-19329973,
19330046-19330087,19330245-19330373,19330468-19330575,
19330729-19330771,19330840-19330878,19331076-19331200,
19331397-19331409,19331504-19331574,19331849-19331936,
19332515-19332600,19332708-19332762,19332859-19333028,
19333157-19333273,19333392-19333453,19333734-19333793,
19333855-19333921
Length = 667
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/45 (22%), Positives = 22/45 (48%)
Frame = +1
Query: 115 PVLQGIAGAVKKIQTTVNNPVKPRDSEVVEETKSEQEKGGVILLP 249
P+LQ + ++Q V++ ++P + V +GG+ +P
Sbjct: 609 PILQYVKRQKSQVQVQVHSSLQPAEPRVSRRNSEGDSRGGLAAVP 653
>05_07_0226 -
28515052-28515064,28515426-28515502,28515610-28515767,
28515852-28515937,28516048-28516351,28516410-28517490
Length = 572
Score = 26.6 bits (56), Expect = 6.0
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Frame = +1
Query: 4 VASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTT-VNNPVK 180
V S AP IA PP + AA K + + + AGA + QTT V K
Sbjct: 349 VPSDAPSIASSRVIRPPPGATGGERAASFNKAVGGQDELAKLEAGAKTEQQTTAVTTTTK 408
Query: 181 PRDSEVVEETKSEQEKGGVILLPVQVTAV 267
+ E + +Q ++L + +T V
Sbjct: 409 GGGAAGAERARGQQNAPAGVMLRLILTTV 437
>02_02_0486 - 10856842-10858104
Length = 420
Score = 26.6 bits (56), Expect = 6.0
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Frame = +1
Query: 1 GVASAAPDIAKPSESNPP-------TETKPEQPAAGPLKQIFENSPVLQGIAG 138
G+AS + + + NPP T + EQPA PL Q E +PVL+ + G
Sbjct: 53 GLASDSSFLRRFRARNPPRLLGFYHTARRDEQPAFVPLPQPPELAPVLRRLGG 105
>01_05_0082 - 17972276-17973268
Length = 330
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 7 ASAAPDIAKPSESNPPTETKPE 72
A+AA A PS S+P ET+PE
Sbjct: 175 AAAAKRAASPSSSSPTHETEPE 196
>10_02_0014 - 4234924-4234986,4235001-4235195
Length = 85
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 89 GPAAGCSGFVSVGGFDSDGFAMSGAALA 6
G A C+ VGGFD DG G + A
Sbjct: 17 GVAGRCTEGYGVGGFDQDGRERDGGSAA 44
>04_04_0871 +
28898262-28898534,28899552-28900015,28900242-28900356,
28900510-28901157,28901282-28901374,28901658-28901795,
28902147-28902206
Length = 596
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +1
Query: 10 SAAPDIAKPSESNPPTETKP-EQPAAGP 90
S+AP A+PSES P P QP+ P
Sbjct: 33 SSAPSAAEPSESIRPAAAPPLSQPSEAP 60
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.310 0.129 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,144,105
Number of Sequences: 37544
Number of extensions: 178309
Number of successful extensions: 610
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 566473892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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