Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30488
         (364 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical prote...    26   0.50 
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    24   1.5  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   4.7  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   4.7  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    22   6.2  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    22   6.2  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    22   8.1  

>AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical protein
           protein.
          Length = 135

 Score = 25.8 bits (54), Expect = 0.50
 Identities = 12/19 (63%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
 Frame = -3

Query: 80  AGCSGFVSV-GGFDSDGFA 27
           AGCSG+VS  GG +SD F+
Sbjct: 65  AGCSGYVSPRGGTNSDDFS 83


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +1

Query: 313 KRKPKKSRYPQKKNRKR 363
           KRK KKS+  Q K RKR
Sbjct: 100 KRKKKKSKKKQNKPRKR 116


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 92  NGPAAGCSGFVSVGGFDSDGFAMSGAA 12
           +GP++  SG  SVGG  S   AM  A+
Sbjct: 220 SGPSSWMSGAGSVGGPSSAAAAMLSAS 246


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +3

Query: 42   VKSAH*NKTRTTRSRAIKTNFREQPSSARHRR 137
            +  ++ N T   R    K  FRE  SS  HR+
Sbjct: 986  ISCSYNNATSILRDNGTKCTFREGMSSIVHRQ 1017


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -2

Query: 234 ASLLLLRFSLFNHFRISWLHWIIDCCLD 151
           AS + L  ++F  F  +W++ +   C D
Sbjct: 490 ASFVALVLAVFEMFAFAWIYGVSRICRD 517


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -2

Query: 234 ASLLLLRFSLFNHFRISWLHWIIDCCLD 151
           AS + L  ++F  F  +W++ +   C D
Sbjct: 490 ASFVALVLAVFEMFAFAWIYGVSRICRD 517


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 4    VASAAPDIAKPSESNPP 54
            VA+  P+ AKP++  PP
Sbjct: 1117 VATILPNSAKPAQQPPP 1133


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.310    0.129    0.353 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 339,948
Number of Sequences: 2352
Number of extensions: 6471
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27084645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)