Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30488
(364 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 33 0.081
U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of ... 31 0.25
AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical ... 31 0.25
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 31 0.33
Z81042-3|CAB02794.2| 660|Caenorhabditis elegans Hypothetical pr... 29 1.00
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 1.00
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 1.00
AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical ... 29 1.3
U42841-14|AAC48172.3| 469|Caenorhabditis elegans Hypothetical p... 28 1.7
AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical ... 28 1.7
Z49130-2|CAA88966.1| 396|Caenorhabditis elegans Hypothetical pr... 28 2.3
AL132902-9|CAC14424.1| 455|Caenorhabditis elegans Hypothetical ... 28 2.3
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 28 2.3
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 28 2.3
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 28 2.3
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 28 2.3
Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical pr... 27 3.0
U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical pr... 27 3.0
AL032621-2|CAA21491.2| 147|Caenorhabditis elegans Hypothetical ... 27 3.0
Z37983-2|CAA86055.1| 585|Caenorhabditis elegans Hypothetical pr... 27 4.0
U39648-3|AAM15603.1| 434|Caenorhabditis elegans Hypothetical pr... 27 4.0
U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12 transcrip... 27 4.0
AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical ... 27 5.3
AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical ... 27 5.3
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 5.3
AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical ... 27 5.3
Z83128-7|CAB05634.2| 243|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical pr... 26 7.0
AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical ... 26 7.0
AL023837-1|CAA19499.1| 718|Caenorhabditis elegans Hypothetical ... 26 7.0
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 26 7.0
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 26 7.0
Z81489-9|CAE17759.1| 326|Caenorhabditis elegans Hypothetical pr... 26 9.3
Z81091-5|CAB03142.1| 768|Caenorhabditis elegans Hypothetical pr... 26 9.3
Z79639-3|CAB01918.1| 385|Caenorhabditis elegans Hypothetical pr... 26 9.3
U50308-4|AAG24030.2| 483|Caenorhabditis elegans Amino acid tran... 26 9.3
U39648-1|AAK39289.2| 162|Caenorhabditis elegans Hypothetical pr... 26 9.3
AF125971-9|AAD14764.1| 442|Caenorhabditis elegans Hypothetical ... 26 9.3
AF116529-1|AAD05570.1| 961|Caenorhabditis elegans synthetic mul... 26 9.3
AF067942-9|AAG45572.1| 347|Caenorhabditis elegans Hypothetical ... 26 9.3
AF067613-12|AAN73861.1| 467|Caenorhabditis elegans Hypothetical... 26 9.3
AF000195-1|AAC24266.2| 961|Caenorhabditis elegans Abnormal cell... 26 9.3
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical
protein B0379.7 protein.
Length = 409
Score = 32.7 bits (71), Expect = 0.081
Identities = 25/82 (30%), Positives = 35/82 (42%)
Frame = +1
Query: 31 KPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKPRDSEVVEET 210
K S S+P T EQPAA P +Q+ + +P A +Q P P+ V
Sbjct: 41 KSSRSSPKTVPVTEQPAAAPPQQLEQPTPA-PAPESAPAPVQCPEPTPEVPQQPTQVSAP 99
Query: 211 KSEQEKGGVILLPVQVTAVTVE 276
E +G +P + T VT E
Sbjct: 100 VQEITQGAPAPIP-EPTPVTAE 120
>U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform b protein.
Length = 1720
Score = 31.1 bits (67), Expect = 0.25
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = +1
Query: 7 ASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKPR 186
AS ++ + P ET AGPL F+ +PV+ V +T + +P
Sbjct: 1381 ASEEKEVQVDEDCFEPEETSRNY-YAGPLWSDFDYTPVIGEDGEEVMDGETQTQDGSEPG 1439
Query: 187 DSEVVEETKSEQEKG 231
D E E+ EQE+G
Sbjct: 1440 DPEFDEQRGQEQEEG 1454
>AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical
protein Y59A8A.3 protein.
Length = 676
Score = 31.1 bits (67), Expect = 0.25
Identities = 23/94 (24%), Positives = 41/94 (43%)
Frame = +1
Query: 7 ASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKPR 186
A+ AP A P+ N PT T +QP+ P +Q V+K+++T + P
Sbjct: 77 AAPAPASAAPAAPNAPTPTAQQQPSPKASAAPIPEKPEIQ-----VQKVESTQASAPIPA 131
Query: 187 DSEVVEETKSEQEKGGVILLPVQVTAVTVEMVGI 288
+ + S +E+ V L + V ++ G+
Sbjct: 132 PAAPTTQKSSPKERKSVNLKDLDQKKVLNKLSGL 165
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 30.7 bits (66), Expect = 0.33
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Frame = +1
Query: 115 PVLQGIAGAVKKIQTTVNNPVK--PRDSEVVE----ETKSEQEKGGVILLP 249
PVL G A K +QT +N+ VK P SEVV +T++ ++ G+IL P
Sbjct: 292 PVLSGSALKNKGVQTMINSVVKYLPDPSEVVNRATVKTETTGDEKGIILSP 342
>Z81042-3|CAB02794.2| 660|Caenorhabditis elegans Hypothetical
protein C27H6.3 protein.
Length = 660
Score = 29.1 bits (62), Expect = 1.00
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 10 SAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENS 114
S P AK + PPTE + P P K+I ENS
Sbjct: 388 SIMPSFAKLIDVAPPTEAEFNNPCLFPEKRIAENS 422
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 1.00
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -3
Query: 308 PVTDVVIIPTISTVTAVTCTGNKMTPPFSCSDLVSSTTSESLGFTG 171
PVT V + S+ T T T + T S + +STT+ S TG
Sbjct: 457 PVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTG 502
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 1.00
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -3
Query: 308 PVTDVVIIPTISTVTAVTCTGNKMTPPFSCSDLVSSTTSESLGFTG 171
PVT V + S+ T T T + T S + +STT+ S TG
Sbjct: 457 PVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTG 502
>AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical
protein Y63D3A.6b protein.
Length = 752
Score = 28.7 bits (61), Expect = 1.3
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +1
Query: 31 KPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNP----VKPRDSEV 198
KP E N P + K + G K + +N+P A+K+ ++ K DSE
Sbjct: 522 KPWEKNKPKQKKKKAQGQGQKKFVKKNAPASPDTEKALKEEAKEEDDDDEKNSKASDSED 581
Query: 199 VEETKSEQEKGG 234
E S+ EK G
Sbjct: 582 EESGASDSEKDG 593
>U42841-14|AAC48172.3| 469|Caenorhabditis elegans Hypothetical
protein T17H7.7 protein.
Length = 469
Score = 28.3 bits (60), Expect = 1.7
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +1
Query: 76 PAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKPRDSEVVEETKSEQEKGGVILLPVQ 255
P A PL F + V G K+ T + + SE ++ET E+E G + PV+
Sbjct: 89 PPAPPLFNPFIPAQVAN--QGPTSKLGTYGKDDEPEKKSEELKETPEEKE--GTVGAPVR 144
Query: 256 VTAVTVEMVGIITTSV 303
V + G+ T S+
Sbjct: 145 TDLVKKTLAGVKTVSI 160
>AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical
protein R05G9R.1 protein.
Length = 789
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -3
Query: 311 QPVTDVVIIPTISTVTAVTCTGNKMTPPFSCSDLVSSTTSESL 183
+P T V + T +T T TP FS L+ T E L
Sbjct: 431 EPTTTVEMTTTTKPITTTEVTSEPPTPSFSVDPLIDYVTHELL 473
>Z49130-2|CAA88966.1| 396|Caenorhabditis elegans Hypothetical
protein T06D8.3 protein.
Length = 396
Score = 27.9 bits (59), Expect = 2.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 201 NHFRISWLHWIIDCCLDFFNCSC 133
NH+R W+ W+I + +F C C
Sbjct: 273 NHWRDIWVAWVIGIFMAWFLCYC 295
>AL132902-9|CAC14424.1| 455|Caenorhabditis elegans Hypothetical
protein Y71A12B.10 protein.
Length = 455
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 13 AAPDIAKPSESNPPTETKPEQPAAGP 90
AAP PSE PP+ T Q GP
Sbjct: 356 AAPQSTVPSEKTPPSHTPSPQSLRGP 381
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 27.9 bits (59), Expect = 2.3
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +1
Query: 10 SAAPDIAKPSESNPPTETKPEQPA---AGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVK 180
SA D P E P E E+PA P +++ PV + A A + V PV
Sbjct: 152 SAPADEPAPEEEKPQEEAPAEEPAPAEEAPQEEVPAEEPVAEETAPAE---EAAVEEPVV 208
Query: 181 PRDSEVVEETKSEQ 222
+ V E ++E+
Sbjct: 209 EEAAPVEEAPEAEE 222
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 27.9 bits (59), Expect = 2.3
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +1
Query: 10 SAAPDIAKPSESNPPTETKPEQPA---AGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVK 180
SA D P E P E E+PA P +++ PV + A A + V PV
Sbjct: 102 SAPADEPAPEEEKPQEEAPAEEPAPAEEAPQEEVPAEEPVAEETAPAE---EAAVEEPVV 158
Query: 181 PRDSEVVEETKSEQ 222
+ V E ++E+
Sbjct: 159 EEAAPVEEAPEAEE 172
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 27.9 bits (59), Expect = 2.3
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +1
Query: 10 SAAPDIAKPSESNPPTETKPEQPA---AGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVK 180
SA D P E P E E+PA P +++ PV + A A + V PV
Sbjct: 152 SAPADEPAPEEEKPQEEAPAEEPAPAEEAPQEEVPAEEPVAEETAPAE---EAAVEEPVV 208
Query: 181 PRDSEVVEETKSEQ 222
+ V E ++E+
Sbjct: 209 EEAAPVEEAPEAEE 222
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 27.9 bits (59), Expect = 2.3
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +1
Query: 10 SAAPDIAKPSESNPPTETKPEQPA---AGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVK 180
SA D P E P E E+PA P +++ PV + A A + V PV
Sbjct: 152 SAPADEPAPEEEKPQEEAPAEEPAPAEEAPQEEVPAEEPVAEETAPAE---EAAVEEPVV 208
Query: 181 PRDSEVVEETKSEQ 222
+ V E ++E+
Sbjct: 209 EEAAPVEEAPEAEE 222
>Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical
protein T01H3.3 protein.
Length = 599
Score = 27.5 bits (58), Expect = 3.0
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Frame = +1
Query: 25 IAKPSESNPP---TETKPEQPAAGPLKQIFENSP---VLQGIAGAVKKIQTTVNNPVKPR 186
I P+E P TET + P+ N P ++ + KK++TT ++ V R
Sbjct: 98 ILPPTEKPAPVITTETPTTRETEKPVPIFITNRPETTTVRAVRTTTKKVETTTSDDVVAR 157
Query: 187 DSEVVEETKSEQEKGGVILLPVQV 258
+ E + + E G +P Q+
Sbjct: 158 EVERTLKKLRDAEDGKSESIPEQL 181
>U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical
protein F47B3.4 protein.
Length = 281
Score = 27.5 bits (58), Expect = 3.0
Identities = 21/74 (28%), Positives = 31/74 (41%)
Frame = +1
Query: 7 ASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKPR 186
A + A+P PP PE P A P PV K+++ + P K +
Sbjct: 43 ARSVASSAEPPPPPPPAPKVPEPPKAPP--------PVDDVKKIEEKEVEKKPDEPAKSK 94
Query: 187 DSEVVEETKSEQEK 228
SE E++K+E K
Sbjct: 95 KSEKKEKSKNEGSK 108
>AL032621-2|CAA21491.2| 147|Caenorhabditis elegans Hypothetical
protein Y45F3A.4 protein.
Length = 147
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 296 VVIIPTISTVTAVTCTGNKMTPPFSCSDLVSSTTSES 186
V+++ T+S V AV C K + +C+D V T + S
Sbjct: 13 VLLLTTVSHVAAVRCKCTKESETVTCTDGVCETENGS 49
>Z37983-2|CAA86055.1| 585|Caenorhabditis elegans Hypothetical
protein B0393.2 protein.
Length = 585
Score = 27.1 bits (57), Expect = 4.0
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +1
Query: 49 PPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKPRDSE--VVEETKSEQ 222
PP + A I +PV Q + ++ TV+ P PR S + E ++ Q
Sbjct: 410 PPAAVNSKNDGAESPSTILALAPVFQKVKNTIRDRSNTVSGPSSPRRSNEPLREPLRTPQ 469
Query: 223 EK 228
+K
Sbjct: 470 KK 471
>U39648-3|AAM15603.1| 434|Caenorhabditis elegans Hypothetical
protein T13C5.2 protein.
Length = 434
Score = 27.1 bits (57), Expect = 4.0
Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Frame = -3
Query: 281 TISTVTAVTCTGNKMTPPFSCS--DLVSSTTSESLGFTGLLTVVWIFLTAPA-MPCRTGL 111
T +T T T T PPF C+ V T + G LL W A A + GL
Sbjct: 34 TTTTTTVATTTTTVTEPPFPCNACPKVYDNTCQGFGIPNLLQ--WCPTAAEAGIEYTLGL 91
Query: 110 FSKICFNGPAAGCSGFVS 57
+ I PA C ++
Sbjct: 92 ITAIFPFIPAGSCGTVIT 109
>U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12
transcriptional activator protein.
Length = 515
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 43 SNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKP 183
S+ K P A LK FEN+P + + A + T P+KP
Sbjct: 467 SSEDNHEKELDPFAAVLK-FFENNPPREALEAAGSETAATTQKPLKP 512
>AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical
protein Y79H2A.1b protein.
Length = 466
Score = 26.6 bits (56), Expect = 5.3
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 43 SNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKP 183
S+ K P A LK FEN+P + + A + T P+KP
Sbjct: 418 SSEDNHEKELDPFAAVLK-FFENNPPREALEAAGAETAATTQKPLKP 463
>AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical
protein Y79H2A.1a protein.
Length = 552
Score = 26.6 bits (56), Expect = 5.3
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 43 SNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKP 183
S+ K P A LK FEN+P + + A + T P+KP
Sbjct: 504 SSEDNHEKELDPFAAVLK-FFENNPPREALEAAGAETAATTQKPLKP 549
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 26.6 bits (56), Expect = 5.3
Identities = 23/75 (30%), Positives = 32/75 (42%)
Frame = +1
Query: 4 VASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKP 183
VA A I S+ + P +T+P QP P P Q AVK + ++P P
Sbjct: 458 VAPAPSVIPTSSQPSQPKQTQPAQPT--PSAPKIPEGPA-QPSPNAVK--TSYGSSPAAP 512
Query: 184 RDSEVVEETKSEQEK 228
R E++E EK
Sbjct: 513 RVPEMIEVAPGNVEK 527
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = +1
Query: 28 AKPSESNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKPRDSEVVE 204
A+P+ S P P QP+ +K + +SP + ++ V D++V E
Sbjct: 480 AQPTPSAPKIPEGPAQPSPNAVKTSYGSSPAAPRVPEMIEVAPGNVEKTPDQTDNQVPE 538
>AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical
protein C51G7.4 protein.
Length = 579
Score = 26.6 bits (56), Expect = 5.3
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 43 SNPPTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKP 183
S+ K P A LK FEN+P + + A + T P+KP
Sbjct: 531 SSEDNHEKELDPFAAVLK-FFENNPPREALEAAGAETAATTQKPLKP 576
>Z83128-7|CAB05634.2| 243|Caenorhabditis elegans Hypothetical
protein W01D2.3 protein.
Length = 243
Score = 26.2 bits (55), Expect = 7.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 293 VIIPTISTVTAVTCTGNKMTPPF 225
+IIPT TVTA++ T + P F
Sbjct: 129 LIIPTFMTVTAISSTSSYENPSF 151
>Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical
protein T13F2.3b protein.
Length = 1076
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 34 PSESNPPTETKPEQPAAGPLKQIFENSPVL 123
P + NP PEQP P Q ++ +P +
Sbjct: 41 PQQQNPSGFVMPEQPRQQPPPQTWQRTPTM 70
>Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical
protein T13F2.3a protein.
Length = 1074
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 34 PSESNPPTETKPEQPAAGPLKQIFENSPVL 123
P + NP PEQP P Q ++ +P +
Sbjct: 41 PQQQNPSGFVMPEQPRQQPPPQTWQRTPTM 70
>AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical
protein Y51H1A.4 protein.
Length = 490
Score = 26.2 bits (55), Expect = 7.0
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +1
Query: 40 ESNP-PTETKPEQP--AAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKPRDSEVVEET 210
ES+P PT + P ++GP + +PVLQ A V + + + R E+ +ET
Sbjct: 290 ESSPTPTTSLLMTPTFSSGPHIVVSPTTPVLQNSAFVVSESRHGRTRKLTSRVQEMFKET 349
Query: 211 KSEQEKGGVILLPVQ 255
Q G ++ +Q
Sbjct: 350 LQRQRNHGNSIIALQ 364
>AL023837-1|CAA19499.1| 718|Caenorhabditis elegans Hypothetical
protein Y37H2C.1 protein.
Length = 718
Score = 26.2 bits (55), Expect = 7.0
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 151 IQTTVNNPVKPRDSEVVEETKSEQEKGGVILLPVQVTAVTVEMVGIIT 294
I T NNP + + S + ++E V L+P+ V A ++ +V +IT
Sbjct: 249 ISDTTNNPHRVKISFI--SVTPDEENAVVSLIPLLVYAASISIVLVIT 294
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 7 ASAAPDIAKPSESNPPTETKPEQPAAGPLKQIFENSPVLQ 126
AS+AP + K S SNP T + P SP +Q
Sbjct: 31 ASSAPSLRKKSSSNPNKGTARSVSKSVPKSSAIPASPTVQ 70
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 26.2 bits (55), Expect = 7.0
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Frame = +1
Query: 7 ASAAPDIAKPSESNPPTET-KPE-QPAAGPLKQIFENSPVLQ-----GIAGAVKKIQTTV 165
++ APDI K + PP T +P +P P I E P + G A +K
Sbjct: 283 STRAPDIGKTLSTQPPRRTPQPHPKPPPPPPPPIHEAQPEVSDSNKLGTTAASRKDCEQS 342
Query: 166 NNPVKPRDSEVVEETKSEQEKGGVILLPVQVTAVTV 273
+ K S E + + GGV+ L V V A+ V
Sbjct: 343 DENCKTPTSAPAESSSTAGIIGGVVAL-VVVCALAV 377
>Z81489-9|CAE17759.1| 326|Caenorhabditis elegans Hypothetical
protein C55A1.12 protein.
Length = 326
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 305 VTDVVIIPTISTVTAVTCTGNKMTPPFSCSDLVSSTTSESLG 180
VTD + P I ++ +TCT +T FS V ++ + G
Sbjct: 265 VTDFITTPLIIQISYLTCTKRNITLMFSSFTTVLNSLNLKYG 306
>Z81091-5|CAB03142.1| 768|Caenorhabditis elegans Hypothetical
protein F55H12.1 protein.
Length = 768
Score = 25.8 bits (54), Expect = 9.3
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +1
Query: 145 KKIQTTVNNPVKPRDSEVVEETKSEQEKGGVILLPVQVTAVTVE 276
K +Q+T+ NPV DSEV T E K G A+ VE
Sbjct: 65 KTVQSTITNPVSFLDSEV---TAKEYVKDGGAARKAYRDAIQVE 105
>Z79639-3|CAB01918.1| 385|Caenorhabditis elegans Hypothetical
protein F54E4.4 protein.
Length = 385
Score = 25.8 bits (54), Expect = 9.3
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +1
Query: 151 IQTTVNNPVKPRDSEVVEETKSEQEKGGVILLPVQVTAVTVEMVGIITTSVTG*KRKPKK 330
I++T P+ S V T + P T VT + + SV + +PKK
Sbjct: 137 IESTTTTPLTTITSTVSATTTVTTQTVTSTTNPPHPTLVTEDDFTVTPVSVR--QFRPKK 194
Query: 331 SRYPQKKNRKR 363
SR+ Q +N R
Sbjct: 195 SRFAQAENMSR 205
>U50308-4|AAG24030.2| 483|Caenorhabditis elegans Amino acid
transporter protein 2 protein.
Length = 483
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 296 VVIIPTISTVTAVTCTGNKMTPPFSC 219
V+I PT + A+TC + P +SC
Sbjct: 107 VIINPTSLAIIAITCATYALQPFYSC 132
>U39648-1|AAK39289.2| 162|Caenorhabditis elegans Hypothetical
protein T13C5.3 protein.
Length = 162
Score = 25.8 bits (54), Expect = 9.3
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = -3
Query: 287 IPTISTVTAVTCTGNKMTPPFSCS--DLVSSTTSESLGFTGLLT 162
+ ++T T T T PPF C+ V T G LLT
Sbjct: 26 VDPVTTTTVATTTTTVTEPPFPCNVCQKVYDTACMGFGIPNLLT 69
>AF125971-9|AAD14764.1| 442|Caenorhabditis elegans Hypothetical
protein Y4C6B.1 protein.
Length = 442
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +1
Query: 52 PTETKPEQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNP 174
P E K + P + I N P L IA ++ TV +P
Sbjct: 349 PAEKKSSPKSLPPAETIVSNRPYLTDIAHGRSMLKKTVRSP 389
>AF116529-1|AAD05570.1| 961|Caenorhabditis elegans synthetic
multivulva protein LIN-35 Rb protein.
Length = 961
Score = 25.8 bits (54), Expect = 9.3
Identities = 15/69 (21%), Positives = 28/69 (40%)
Frame = +1
Query: 70 EQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKPRDSEVVEETKSEQEKGGVILLP 249
++P E SP +AG P K D ++ +E + GG+I
Sbjct: 7 DEPGTSTTDPFHEQSPFDAVLAGTETTDTICEEPPAKRIDLDIKQEFNGGVQSGGLIKNE 66
Query: 250 VQVTAVTVE 276
++T +T++
Sbjct: 67 SELTQMTIK 75
>AF067942-9|AAG45572.1| 347|Caenorhabditis elegans Hypothetical
protein ZK6.2 protein.
Length = 347
Score = 25.8 bits (54), Expect = 9.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 201 NHFRISWLHWIIDCCL 154
N+F++S HW CCL
Sbjct: 137 NNFQMSHKHWAFHCCL 152
>AF067613-12|AAN73861.1| 467|Caenorhabditis elegans Hypothetical
protein F56D6.2 protein.
Length = 467
Score = 25.8 bits (54), Expect = 9.3
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -3
Query: 311 QPVTDVVIIPTISTVTAVTC-TGNKMTPPFSCS-DLVSS 201
QPVT PT +T V C G + T F+ S DLV S
Sbjct: 150 QPVTPKATTPTTTTAANVNCPLGGQQTVLFAYSNDLVPS 188
>AF000195-1|AAC24266.2| 961|Caenorhabditis elegans Abnormal cell
lineage protein 35 protein.
Length = 961
Score = 25.8 bits (54), Expect = 9.3
Identities = 15/69 (21%), Positives = 28/69 (40%)
Frame = +1
Query: 70 EQPAAGPLKQIFENSPVLQGIAGAVKKIQTTVNNPVKPRDSEVVEETKSEQEKGGVILLP 249
++P E SP +AG P K D ++ +E + GG+I
Sbjct: 7 DEPGTSTTDPFHEQSPFDAVLAGTETTDTICEEPPAKRIDLDIKQEFNGGVQSGGLIKNE 66
Query: 250 VQVTAVTVE 276
++T +T++
Sbjct: 67 SELTQMTIK 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.310 0.129 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,612,898
Number of Sequences: 27780
Number of extensions: 148993
Number of successful extensions: 555
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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