Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30487
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical... 66 2e-11
Z78413-12|CAB01666.3| 448|Caenorhabditis elegans Hypothetical p... 54 8e-08
Z78411-5|CAB01647.3| 448|Caenorhabditis elegans Hypothetical pr... 54 8e-08
AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical ... 50 2e-06
AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical ... 50 2e-06
AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical... 48 2e-06
AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical... 48 2e-06
AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical... 48 2e-06
AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical ... 49 3e-06
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 49 3e-06
Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z71267-9|CAA95852.2| 380|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z71262-14|CAN99672.1| 380|Caenorhabditis elegans Hypothetical p... 40 0.001
U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical pr... 36 0.041
AF099003-2|AAC68743.2| 454|Caenorhabditis elegans Hypothetical ... 36 0.041
Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z92789-6|CAB07218.2| 303|Caenorhabditis elegans Hypothetical pr... 30 2.0
AC024817-14|AAY86301.1| 354|Caenorhabditis elegans Hypothetical... 29 2.7
Z67995-2|CAA91944.2| 458|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z66567-8|CAA91494.1| 402|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z66561-9|CAA91462.1| 402|Caenorhabditis elegans Hypothetical pr... 29 4.7
AL031627-13|CAA20964.1| 304|Caenorhabditis elegans Hypothetical... 28 6.2
Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical pr... 28 8.1
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 28 8.1
>AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical
protein Y18H1A.9 protein.
Length = 488
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/81 (35%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Frame = +3
Query: 276 EIELQDRRGHRMTWK--QYHRLEDIYGFMDYLAKTYPSIISVKSIGKSFEGRDLKILRIS 449
++ L D R ++ + QYH D+ +++ LA TYP ++SV+ IG + EGR + +++I+
Sbjct: 107 QVRLHDWREQKVQFNLAQYHSFADVINYLNSLAITYPELVSVQPIGTTHEGRQIPLIKIT 166
Query: 450 NGKS--DNKAVFIDGGIHARE 506
N ++ + +++DGGIHARE
Sbjct: 167 NKRNGGTKRGIWVDGGIHARE 187
>Z78413-12|CAB01666.3| 448|Caenorhabditis elegans Hypothetical
protein F02D8.4 protein.
Length = 448
Score = 54.4 bits (125), Expect = 8e-08
Identities = 24/62 (38%), Positives = 41/62 (66%)
Frame = +3
Query: 321 QYHRLEDIYGFMDYLAKTYPSIISVKSIGKSFEGRDLKILRISNGKSDNKAVFIDGGIHA 500
+Y ++ F++ LA+ YP+ + +++IG S+EGR + +RI++ S V+ID GIHA
Sbjct: 118 RYLSYDEQMKFLNSLAQQYPNDVKLQNIGNSYEGRSITAVRIADDGSSKPIVWIDAGIHA 177
Query: 501 RE 506
RE
Sbjct: 178 RE 179
>Z78411-5|CAB01647.3| 448|Caenorhabditis elegans Hypothetical
protein F02D8.4 protein.
Length = 448
Score = 54.4 bits (125), Expect = 8e-08
Identities = 24/62 (38%), Positives = 41/62 (66%)
Frame = +3
Query: 321 QYHRLEDIYGFMDYLAKTYPSIISVKSIGKSFEGRDLKILRISNGKSDNKAVFIDGGIHA 500
+Y ++ F++ LA+ YP+ + +++IG S+EGR + +RI++ S V+ID GIHA
Sbjct: 118 RYLSYDEQMKFLNSLAQQYPNDVKLQNIGNSYEGRSITAVRIADDGSSKPIVWIDAGIHA 177
Query: 501 RE 506
RE
Sbjct: 178 RE 179
>AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical
protein T06A4.3b protein.
Length = 455
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/65 (40%), Positives = 36/65 (55%)
Frame = +3
Query: 312 TWKQYHRLEDIYGFMDYLAKTYPSIISVKSIGKSFEGRDLKILRISNGKSDNKAVFIDGG 491
T+ Y R+ D +M L YP ++ SIGK+ EGR++ + I K +IDGG
Sbjct: 127 TYGSYQRMTD---WMKQLVVKYPKMVQYISIGKTTEGRNIDGVEIGGDSRTKKIFWIDGG 183
Query: 492 IHARE 506
IHARE
Sbjct: 184 IHARE 188
>AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical
protein T06A4.3a protein.
Length = 505
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/65 (40%), Positives = 36/65 (55%)
Frame = +3
Query: 312 TWKQYHRLEDIYGFMDYLAKTYPSIISVKSIGKSFEGRDLKILRISNGKSDNKAVFIDGG 491
T+ Y R+ D +M L YP ++ SIGK+ EGR++ + I K +IDGG
Sbjct: 127 TYGSYQRMTD---WMKQLVVKYPKMVQYISIGKTTEGRNIDGVEIGGDSRTKKIFWIDGG 183
Query: 492 IHARE 506
IHARE
Sbjct: 184 IHARE 188
>AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.19a protein.
Length = 468
Score = 48.0 bits (109), Expect(2) = 2e-06
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +3
Query: 306 RMTWKQYHRLEDIYGFMDYLAKTYPSIISVKSIGKSFEGRDLKILRISNGKSDNKAVFID 485
R+ +Y+ + +++ +A+ P I + +G + EGRD+ L+ D K V ID
Sbjct: 90 RLRMGEYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLKFGKDTPDKKIVVID 149
Query: 486 GGIHARE 506
GIHARE
Sbjct: 150 AGIHARE 156
Score = 21.0 bits (42), Expect(2) = 2e-06
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 588 IDWVFHAGSWNPDGIRVYTLPWIVLGREE 674
ID HA W Y + IV GREE
Sbjct: 148 IDAGIHAREWAAIHTASYFINLIVNGREE 176
>AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical
protein Y47G6A.19c protein.
Length = 464
Score = 48.0 bits (109), Expect(2) = 2e-06
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +3
Query: 306 RMTWKQYHRLEDIYGFMDYLAKTYPSIISVKSIGKSFEGRDLKILRISNGKSDNKAVFID 485
R+ +Y+ + +++ +A+ P I + +G + EGRD+ L+ D K V ID
Sbjct: 90 RLRMGEYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLKFGKDTPDKKIVVID 149
Query: 486 GGIHARE 506
GIHARE
Sbjct: 150 AGIHARE 156
Score = 21.0 bits (42), Expect(2) = 2e-06
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 588 IDWVFHAGSWNPDGIRVYTLPWIVLGREE 674
ID HA W Y + IV GREE
Sbjct: 148 IDAGIHAREWAAIHTASYFINLIVNGREE 176
>AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical
protein Y47G6A.19b protein.
Length = 438
Score = 48.0 bits (109), Expect(2) = 2e-06
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +3
Query: 306 RMTWKQYHRLEDIYGFMDYLAKTYPSIISVKSIGKSFEGRDLKILRISNGKSDNKAVFID 485
R+ +Y+ + +++ +A+ P I + +G + EGRD+ L+ D K V ID
Sbjct: 90 RLRMGEYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLKFGKDTPDKKIVVID 149
Query: 486 GGIHARE 506
GIHARE
Sbjct: 150 AGIHARE 156
Score = 21.0 bits (42), Expect(2) = 2e-06
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 588 IDWVFHAGSWNPDGIRVYTLPWIVLGREE 674
ID HA W Y + IV GREE
Sbjct: 148 IDAGIHAREWAAIHTASYFINLIVNGREE 176
>AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical
protein T06A4.1a protein.
Length = 579
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Frame = +3
Query: 315 WKQYHRLEDIYGFMDYLAKTYPSIISVKSIGKSFEGRDLKILRIS---NGKSDNKAVFID 485
+ +Y+ LE+I M L K YP++I++ IG+S E R L +++I+ N +++ID
Sbjct: 125 YDKYNSLEEIQTEMKRLKKEYPTMITLIDIGQSHENRTLLVMKITGKRNPLGSKISMWID 184
Query: 486 GGIHARE 506
GIHARE
Sbjct: 185 AGIHARE 191
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Frame = +3
Query: 315 WKQYHRLEDIYGFMDYLAKTYPSIISVKSIGKSFEGRDLKILRIS---NGKSDNKAVFID 485
+ +Y+ LE+I M L K YP++I++ IG+S E R L +++I+ N +++ID
Sbjct: 125 YDKYNSLEEIQTEMKRLKKEYPTMITLIDIGQSHENRTLLVMKITGKRNPLGSKISMWID 184
Query: 486 GGIHARE 506
GIHARE
Sbjct: 185 AGIHARE 191
>Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical
protein ZC434.9b protein.
Length = 532
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Frame = +3
Query: 306 RMTWKQYHRLEDIYGFMDYLAKTYPSIISVKSIGKSFEGRDLKILRISN--GKSDNKAVF 479
R + +YH + I +M + + YP V ++G + EGR ++ ++I + ++D + +
Sbjct: 135 RYGFGEYHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQGIKIGSQVWRNDKRIFW 194
Query: 480 IDGGIHARE 506
IDGGIHARE
Sbjct: 195 IDGGIHARE 203
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 145 DILIKPNVVENITRVFKRESIDYNVVIEDLQKRINEE 255
DI++ + +E + V K +I Y+V+IED+ K I E+
Sbjct: 74 DIMVDEDRMEWLDSVLKNSNISYDVIIEDVGKLILEK 110
>Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical
protein ZC434.9a protein.
Length = 581
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Frame = +3
Query: 306 RMTWKQYHRLEDIYGFMDYLAKTYPSIISVKSIGKSFEGRDLKILRISN--GKSDNKAVF 479
R + +YH + I +M + + YP V ++G + EGR ++ ++I + ++D + +
Sbjct: 135 RYGFGEYHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQGIKIGSQVWRNDKRIFW 194
Query: 480 IDGGIHARE 506
IDGGIHARE
Sbjct: 195 IDGGIHARE 203
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 145 DILIKPNVVENITRVFKRESIDYNVVIEDLQKRINEE 255
DI++ + +E + V K +I Y+V+IED+ K I E+
Sbjct: 74 DIMVDEDRMEWLDSVLKNSNISYDVIIEDVGKLILEK 110
>Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical
protein R11A5.7 protein.
Length = 664
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 324 YHRLEDIYGFMDYLAKTYPSIISVKSIGKSFEGRDLKILRISNGKSDNK-AVFIDGGIHA 500
Y D+ +M + YP I + IG + EG+ ++ L+I S K AV++DG IHA
Sbjct: 161 YASYADMVKYMRTIEFYYPRIAKIVRIGATHEGKPIEGLKIGARSSHKKRAVWVDGNIHA 220
Query: 501 RE 506
RE
Sbjct: 221 RE 222
>Z71267-9|CAA95852.2| 380|Caenorhabditis elegans Hypothetical
protein W01A8.6 protein.
Length = 380
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Frame = +3
Query: 351 FMDYL---AKTYPSIISVKSIGKSFEGRDLKILRISNGKSDNK---AVFIDGGIHARE 506
F DY+ A PS + +K+IG++ EGR L +RI K AV++DGG HARE
Sbjct: 41 FEDYIKGVAHDNPSFVQLKTIGRTREGRPLLGVRIGKPALPGKRKIAVWLDGGNHARE 98
>Z71262-14|CAN99672.1| 380|Caenorhabditis elegans Hypothetical
protein W01A8.6 protein.
Length = 380
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Frame = +3
Query: 351 FMDYL---AKTYPSIISVKSIGKSFEGRDLKILRISNGKSDNK---AVFIDGGIHARE 506
F DY+ A PS + +K+IG++ EGR L +RI K AV++DGG HARE
Sbjct: 41 FEDYIKGVAHDNPSFVQLKTIGRTREGRPLLGVRIGKPALPGKRKIAVWLDGGNHARE 98
>U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical
protein F59A3.1 protein.
Length = 1014
Score = 35.5 bits (78), Expect = 0.041
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +3
Query: 258 PPLDNDEIELQDRRGHRMTWKQYHRLEDIYGFMDYLAKTYPSIISVKSIGKSFEGRDLKI 437
P D + ++ D T + H ++ ++ YP+I + S GKS EGR+L +
Sbjct: 56 PTWDTMKAKIGDFINVNSTKLKNHNYNEMTAWLKATRLNYPNITHLYSAGKSVEGRELWV 115
Query: 438 LRISNGKSDNK----AVFIDGGIHARE 506
L IS+ ++K + I G +H E
Sbjct: 116 LIISDKPKEHKLMEPELKIVGNMHGNE 142
>AF099003-2|AAC68743.2| 454|Caenorhabditis elegans Hypothetical
protein Y59C2A.1 protein.
Length = 454
Score = 35.5 bits (78), Expect = 0.041
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Frame = +3
Query: 294 RRGHRMTWKQ-----YHRLEDIYGFMDYLAKTYPSIISVKSIGKSFEGRDLKILRI-SNG 455
R+ TW++ YH ++ FM L++ ++ + + S EGR + ++I G
Sbjct: 132 RKRAMKTWQEFDTNAYHSYNEMVEFMKLLSEQKSDMVEMVKVATSSEGRSIYGVKIHPPG 191
Query: 456 KS--DNKAVFIDGGIHARE 506
S + ++ +D G+HARE
Sbjct: 192 PSPPEKPSIIVDAGVHARE 210
>Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical
protein F01D4.4 protein.
Length = 472
Score = 31.1 bits (67), Expect = 0.87
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +3
Query: 315 WKQYHRLEDIYGFMDYLAKTYPSIISVKSIGKSFEGRDLKILRISNGKSDN----KAVFI 482
W YH + + + + P I ++ IG+S EGR L +++ S ++ V +
Sbjct: 37 WGHYHNQAQLEAKLGEINEKCPEITTLYEIGQSVEGRPLVVIQFSTTPGEHIPTKPEVKL 96
Query: 483 DGGIHARE 506
G +H E
Sbjct: 97 IGNMHGNE 104
>Z92789-6|CAB07218.2| 303|Caenorhabditis elegans Hypothetical
protein H02I12.4 protein.
Length = 303
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +1
Query: 112 ISTWGGNQSS--VDILIKPNVVENITRVFKRESIDYNVVIE 228
IST N+ S ++++KPNVV N+TR+ + YN++I+
Sbjct: 40 ISTDVQNEESNVFEVILKPNVVFNVTRIPVDFNKTYNLIIK 80
>AC024817-14|AAY86301.1| 354|Caenorhabditis elegans Hypothetical
protein Y54G2A.45 protein.
Length = 354
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 585 GIDWVFHAGSWNPDGIRVYT 644
G WV AG +NPD ++V+T
Sbjct: 227 GASWVVKAGIFNPDSVKVFT 246
>Z67995-2|CAA91944.2| 458|Caenorhabditis elegans Hypothetical
protein M153.2 protein.
Length = 458
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -1
Query: 333 ICDTVSMSFGDLVCLAVQFHRYLA-ADFLIDPLL*IFYHDVVVYALSFENTCNIFYDIRF 157
+CDT S L + L+ A F P+L +++H V++ S C FY R
Sbjct: 361 LCDTFSKQSAQAFSLFKLYQSALSCAAFFYAPVLQLYWHLVILVVTSLFAACCFFYVERI 420
Query: 156 DKD 148
++
Sbjct: 421 SRE 423
>Z66567-8|CAA91494.1| 402|Caenorhabditis elegans Hypothetical
protein ZK455.6 protein.
Length = 402
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 70 GARQVIGRLRRRNLISTWGGNQSSVDILIKPNVVENITRVFKRESID 210
G + + +L+R ++ G S+D L PNV +++ +FK E D
Sbjct: 78 GMKIELVQLQRDSIGRKKSGASISIDPLFTPNVASSLSAIFKNEKED 124
>Z66561-9|CAA91462.1| 402|Caenorhabditis elegans Hypothetical
protein ZK455.6 protein.
Length = 402
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 70 GARQVIGRLRRRNLISTWGGNQSSVDILIKPNVVENITRVFKRESID 210
G + + +L+R ++ G S+D L PNV +++ +FK E D
Sbjct: 78 GMKIELVQLQRDSIGRKKSGASISIDPLFTPNVASSLSAIFKNEKED 124
>AL031627-13|CAA20964.1| 304|Caenorhabditis elegans Hypothetical
protein Y102A5C.23 protein.
Length = 304
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -1
Query: 258 DFLIDPLL*IFYHDVVVYALSFENTC-NIFY 169
+ LI P+ FYH V++Y L F TC ++F+
Sbjct: 57 EILIYPITKHFYHMVIIYYLIFVLTCISVFF 87
>Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical
protein F43D9.1 protein.
Length = 1226
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -1
Query: 351 SRKCLLICDTVSMSFGDLVCLAVQFHRYLAADFLIDPL 238
S+ CL I +++ G + L++QF+R L D L+ P+
Sbjct: 475 SKPCLGIMIFITLVVGSITGLSMQFYRDLPVDPLVYPI 512
>Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical
protein F43D9.1 protein.
Length = 1226
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -1
Query: 351 SRKCLLICDTVSMSFGDLVCLAVQFHRYLAADFLIDPL 238
S+ CL I +++ G + L++QF+R L D L+ P+
Sbjct: 475 SKPCLGIMIFITLVVGSITGLSMQFYRDLPVDPLVYPI 512
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 243 DQ*GNPPLDNDEIELQD 293
D GNPP++N +I+LQD
Sbjct: 8 DSAGNPPVENPDIDLQD 24
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,422,119
Number of Sequences: 27780
Number of extensions: 410047
Number of successful extensions: 985
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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