Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30486
         (822 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC059399-1|AAH59399.1|  646|Homo sapiens solute carrier family 2...    41   0.006
AJ406617-1|CAC10681.1|  116|Homo sapiens immunoglobulin heavy ch...    31   3.8  
AJ406596-1|CAC10661.1|  116|Homo sapiens immunoglobulin heavy ch...    31   5.0  
AJ406615-1|CAC10679.1|  116|Homo sapiens immunoglobulin heavy ch...    30   8.8  

>BC059399-1|AAH59399.1|  646|Homo sapiens solute carrier family 27
           (fatty acid transporter), member 1 protein.
          Length = 646

 Score = 40.7 bits (91), Expect = 0.006
 Identities = 20/53 (37%), Positives = 31/53 (58%)
 Frame = +3

Query: 96  LFMDCMRRRPDSVCQIDAATGETETNASVLQRSVRLAKYMRTLGLNPGDVLAL 254
           +F   ++R+P+ +  +DA TGE  T A +   S  +A   R LG  PGDV+A+
Sbjct: 81  IFQAVVQRQPERLALVDAGTGECWTFAQLDAYSNAVANLFRQLGFAPGDVVAI 133


>AJ406617-1|CAC10681.1|  116|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 116

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
 Frame = +1

Query: 217 GRSVLTRVMYWHWGKKPPGSLYTILCCLNEWI---SYNRRRSTIQNT*NQKLFQIDATKN 387
           G S+ +R  YW W ++PPG          EWI   +YN R     +  N+     D +KN
Sbjct: 26  GGSISSRNSYWDWIRQPPGKGL-------EWIGNVNYNLRPYYNPSLKNRVSISADTSKN 78

Query: 388 ----SVLSTKSTGKLLGSCPRTRARHESHHI 468
               ++ S  +    +  C R+  R   HH+
Sbjct: 79  QFSLNLSSVTAADTAVYYCARSCVRSYVHHV 109


>AJ406596-1|CAC10661.1|  116|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 116

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
 Frame = +1

Query: 217 GRSVLTRVMYWHWGKKPPGSLYTILCCLNEWI---SYNRRRSTIQNT*NQKLFQIDATKN 387
           G S+ +R  YW W ++PPG          EWI   +YN R     +  N+     D +KN
Sbjct: 26  GGSISSRNSYWDWIRQPPGKDL-------EWIGNVNYNLRPYYNPSLKNRVSISADTSKN 78

Query: 388 ----SVLSTKSTGKLLGSCPRTRARHESHHI 468
               ++ S  +    +  C R+  R   HH+
Sbjct: 79  QFSLNLSSVTAADTAVYYCARSCVRTYVHHV 109


>AJ406615-1|CAC10679.1|  116|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 116

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
 Frame = +1

Query: 217 GRSVLTRVMYWHWGKKPPGSLYTILCCLNEWI---SYNRRRSTIQNT*NQKLFQIDATKN 387
           G S+ +R  YW W ++PPG          EWI   +YN R     +  N+     D +KN
Sbjct: 26  GGSISSRNSYWDWIRQPPGKGL-------EWIGNVNYNLRPYYNPSLKNRVSISADTSKN 78

Query: 388 ----SVLSTKSTGKLLGSCPRTRARHESHHI 468
               +V S  +    +  C R+  R+  H +
Sbjct: 79  QFSLNVTSVTAADTAVYFCARSCVRNYVHSV 109


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,748,394
Number of Sequences: 237096
Number of extensions: 2527993
Number of successful extensions: 7321
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7321
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)