Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30486
         (822 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   7.9  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        22   7.9  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   7.9  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   7.9  

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +1

Query: 772 FNAYWGLPVF 801
           FN YW +P F
Sbjct: 43  FNVYWNVPTF 52


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 262 SSPSASTSPGLRPSVRMY 209
           S  SASTSP  R +  MY
Sbjct: 72  SGSSASTSPAARTTSSMY 89


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/42 (21%), Positives = 18/42 (42%)
 Frame = -3

Query: 205 ANRTDRCSTDAFVSVSPVAASIWHTESGRLLMQSINRCPMWY 80
           +N+ D  +    + V+     I   E    +   +NR P+W+
Sbjct: 397 SNKIDETTLKHLIDVASDRFFITDGEKAARMQAKVNRQPVWF 438


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/42 (21%), Positives = 18/42 (42%)
 Frame = -3

Query: 205 ANRTDRCSTDAFVSVSPVAASIWHTESGRLLMQSINRCPMWY 80
           +N+ D  +    + V+     I   E    +   +NR P+W+
Sbjct: 397 SNKIDETTLKHLIDVASDRFFITDGEKAARMQAKVNRQPVWF 438


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,170
Number of Sequences: 438
Number of extensions: 5239
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)