Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30485
         (628 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50177-6|CAA90547.1|  287|Caenorhabditis elegans Hypothetical pr...    71   5e-13
Z50177-5|CAE46663.1|  289|Caenorhabditis elegans Hypothetical pr...    67   8e-12
Z50177-4|CAA90546.1|  287|Caenorhabditis elegans Hypothetical pr...    67   8e-12
Z70310-7|CAA94364.1|  607|Caenorhabditis elegans Hypothetical pr...    58   4e-09
U97193-7|AAK68163.1|  299|Caenorhabditis elegans Yeast sir relat...    41   6e-04

>Z50177-6|CAA90547.1|  287|Caenorhabditis elegans Hypothetical
           protein F46G10.3 protein.
          Length = 287

 Score = 71.3 bits (167), Expect = 5e-13
 Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 15/185 (8%)
 Frame = +1

Query: 1   AKANYTAGHFAIAKFEDNHGSQKKITVITQNVDGLHARAGTKRLIELHGNLYKTRCTKCK 180
           A+A     H+A++K+E    + K   +ITQNVDGLH +AG+K + ELHGN  + +CT C+
Sbjct: 90  AQALPNFNHYALSKWE---AANKFHWLITQNVDGLHLKAGSKMITELHGNALQVKCTSCE 146

Query: 181 EV--------LVNNDSPICTCK*RSPRF*YGGFDIPVKL-------LPHCKKAHCGALLR 315
            +         +N  +P    +  SP       D  + L       +P C   +CG L++
Sbjct: 147 YIETRQTYQDRLNYANPGFKEQFVSPGQQELDADTALPLGSEQGFKIPEC--LNCGGLMK 204

Query: 316 PHIVWFGESLEHDILEAAEHAMSTCDVCLVVGTSSVVYPAAMFAPQAASRGAIVAEFNIE 495
             +  FGE+L  D ++     ++ C+  L +GTS  V         A  +   +   NI 
Sbjct: 205 TDVTLFGENLNTDKIKVCGKKVNECNGVLTLGTSLEVLSGYQIVNHAHMQNKPIFIVNIG 264

Query: 496 PTPAN 510
           PT A+
Sbjct: 265 PTRAD 269


>Z50177-5|CAE46663.1|  289|Caenorhabditis elegans Hypothetical
           protein F46G10.7b protein.
          Length = 289

 Score = 67.3 bits (157), Expect = 8e-12
 Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
 Frame = +1

Query: 25  HFAIAKFEDNHGSQKKITVITQNVDGLHARAGTKRLIELHGNLYKTRCTKCKEV------ 186
           H+A++K+E    S +   +ITQNVDGLH +AG+K + ELHG+  + +CT C  +      
Sbjct: 100 HYALSKWE---ASDRFQWLITQNVDGLHLKAGSKMVTELHGSALQVKCTTCDYIESRQTY 156

Query: 187 --LVNNDSPICTCK*RSPRF*YGGFDIPVKL-------LPHCKKAHCGALLRPHIVWFGE 339
              ++  +P    +  +P       DI + L       +P C    CG L++  + +FGE
Sbjct: 157 QDRLDYANPGFKEEHVAPGELAPDGDIILPLGTEKGFQIPECPS--CGGLMKTDVTFFGE 214

Query: 340 SLEHDILEAAEHAMSTCDVCLVVGTSSVVYPAAMFAPQAASRGAIVAEFNIEPTPAN 510
           ++  D +      ++ CD  L +GTS  V     F   A  +   +   NI PT A+
Sbjct: 215 NVNMDKVNFCYEKVNECDGILSLGTSLAVLSGFRFIHHANMKKKPIFIVNIGPTRAD 271


>Z50177-4|CAA90546.1|  287|Caenorhabditis elegans Hypothetical
           protein F46G10.7a protein.
          Length = 287

 Score = 67.3 bits (157), Expect = 8e-12
 Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
 Frame = +1

Query: 25  HFAIAKFEDNHGSQKKITVITQNVDGLHARAGTKRLIELHGNLYKTRCTKCKEV------ 186
           H+A++K+E    S +   +ITQNVDGLH +AG+K + ELHG+  + +CT C  +      
Sbjct: 98  HYALSKWE---ASDRFQWLITQNVDGLHLKAGSKMVTELHGSALQVKCTTCDYIESRQTY 154

Query: 187 --LVNNDSPICTCK*RSPRF*YGGFDIPVKL-------LPHCKKAHCGALLRPHIVWFGE 339
              ++  +P    +  +P       DI + L       +P C    CG L++  + +FGE
Sbjct: 155 QDRLDYANPGFKEEHVAPGELAPDGDIILPLGTEKGFQIPECPS--CGGLMKTDVTFFGE 212

Query: 340 SLEHDILEAAEHAMSTCDVCLVVGTSSVVYPAAMFAPQAASRGAIVAEFNIEPTPAN 510
           ++  D +      ++ CD  L +GTS  V     F   A  +   +   NI PT A+
Sbjct: 213 NVNMDKVNFCYEKVNECDGILSLGTSLAVLSGFRFIHHANMKKKPIFIVNIGPTRAD 269


>Z70310-7|CAA94364.1|  607|Caenorhabditis elegans Hypothetical
           protein R11A8.4 protein.
          Length = 607

 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 39/140 (27%), Positives = 64/140 (45%)
 Frame = +1

Query: 85  TQNVDGLHARAGTKRLIELHGNLYKTRCTKCKEVLVNNDSPICTCK*RSPRF*YGGFDIP 264
           TQN+D L  + G KR++E HG+  K  CT+C +    N+        R         ++ 
Sbjct: 236 TQNIDTLEHQTGIKRVVECHGSFSKCTCTRCGQKYDGNEI-------RE--------EVL 280

Query: 265 VKLLPHCKKAHCGALLRPHIVWFGESLEHDILEAAEHAMSTCDVCLVVGTSSVVYPAAMF 444
              + HCK+  C  +++P+IV+FGE L  +  +         D+ +V+G+S  V P A+ 
Sbjct: 281 AMRVAHCKR--CEGVIKPNIVFFGEDLGREFHQHVTEDKHKVDLIVVIGSSLKVRPVALI 338

Query: 445 APQAASRGAIVAEFNIEPTP 504
            P    +       N E  P
Sbjct: 339 -PHCVDKNVPQILINRESLP 357


>U97193-7|AAK68163.1|  299|Caenorhabditis elegans Yeast sir related
           protein 2.4 protein.
          Length = 299

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = +1

Query: 76  TVITQNVDGLHARAG--TKRLIELHGNLYKTRCTKC 177
           T+ITQNVDGL  + G   + LIE+HGNL+   C  C
Sbjct: 119 TIITQNVDGLDRKVGIPVEDLIEVHGNLFLEVCQSC 154


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,519,031
Number of Sequences: 27780
Number of extensions: 386101
Number of successful extensions: 934
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)