Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30484
         (728 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56966-4|AAA98719.2|  906|Caenorhabditis elegans Ace(angiotensin...    40   0.002
AC006630-5|AAK68323.1|  335|Caenorhabditis elegans Collagen prot...    31   0.64 
Z70207-1|CAA94128.1|  291|Caenorhabditis elegans Hypothetical pr...    29   3.4  
L16559-8|AAA27929.2|  643|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U58757-5|AAC47919.3|  555|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>U56966-4|AAA98719.2|  906|Caenorhabditis elegans Ace(angiotensin
           converting enzyme)-like non-peptidase protein 1, isoform
           a protein.
          Length = 906

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +1

Query: 268 DLFRYGVFRRKTLPEDYNCHYWKLREQLQGVEPPVNRTEDDFDAAAKYHVS-ANVEYARY 444
           D +RY +F         N  +W++R + +GV  P      + DA     VS  +    R 
Sbjct: 616 DNWRYELFDGTVPKNKLNDRWWEIRNKYEGVRSPQPYNTSNLDALIHNSVSQVHSPATRT 675

Query: 445 YVSFIIQFQFHRALC 489
            +S++++FQ  +ALC
Sbjct: 676 LISYVLKFQILKALC 690



 Score = 38.3 bits (85), Expect = 0.006
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
 Frame = +2

Query: 8   FQTTHHEMGHIQYYLQYRDQPVVFRDGANQGFHEAVGDTIALSVSSPKHLRRVGLATGDA 187
           F+  H  +    Y   Y+DQ ++FR+ A+    +A+ +  A   ++P +L    L   + 
Sbjct: 527 FEQAHSLLVQTYYQYLYKDQSLLFREQASPVITDAIANAFAHLSTNPHYLYSQKLVPSEH 586

Query: 188 ED--EQTEINQLYKMGIDKIAFLP 253
            D  +   IN+LYK  ++    LP
Sbjct: 587 LDIKDSVIINKLYKESLESFTKLP 610


>AC006630-5|AAK68323.1|  335|Caenorhabditis elegans Collagen protein
           165 protein.
          Length = 335

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
 Frame = +1

Query: 13  DHPPRDGAHPILPAVPGP--ARCVQGRSEPRFPRSGRGHDSPLG 138
           D P  +G  P++ A P P    C QG + P  P    GHD   G
Sbjct: 121 DQPSNNGYGPVVNAEPAPQCCTCQQGNAGPPGPPGDDGHDGKDG 164


>Z70207-1|CAA94128.1|  291|Caenorhabditis elegans Hypothetical
           protein F15A2.1 protein.
          Length = 291

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
 Frame = +1

Query: 10  PDHPPRDGAHPILPAVPGPARCV--QGRSEPRFPRSGRGHDSPLG 138
           P+ PP    HP  P  PGPA     +G+  P  P    G   P G
Sbjct: 165 PNGPPGPNGHPGQPGRPGPAGPAGPEGKDGPVGPHGPAGPAGPRG 209


>L16559-8|AAA27929.2|  643|Caenorhabditis elegans Hypothetical
           protein C06E1.9 protein.
          Length = 643

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -1

Query: 155 DVSATTPRGLSCPRPLRGNLGSLRP*TQRAGPGT-AGSIGCAPSRGGWSG 9
           +  ++ P GLS P P +G+ G       R G G   G+ G APS  G++G
Sbjct: 573 EAGSSAPPGLSQPPPYQGSRGG------RGGRGARGGNRGGAPSADGYTG 616


>U58757-5|AAC47919.3|  555|Caenorhabditis elegans Hypothetical
           protein C01B10.9 protein.
          Length = 555

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +1

Query: 244 IPTVAYTLDLFRYGVFRRKTLPEDYNCHYWKLREQLQGVEPPVNRTEDDFD 396
           IP++   +  F YG  +   L  D N   W   + +QG  P  NRT + F+
Sbjct: 454 IPSMCIVIIFFAYGC-KNTVLKSDPN---WGRSDTVQGYRPLSNRTNEGFE 500


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,993,643
Number of Sequences: 27780
Number of extensions: 316618
Number of successful extensions: 1098
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)