Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30482
(781 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 5.6
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 5.6
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 5.6
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 5.6
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 5.6
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 5.6
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 5.6
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 5.6
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 22 5.6
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 22 7.4
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 22 7.4
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 22 7.4
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 9 KQETTTDAHHLPSGTRLRSERNQIGAKRTT 98
K+ TT +HH + RSE ++ G + T
Sbjct: 2 KRNTTNHSHHDERFRQSRSEDSETGLRSRT 31
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 9 KQETTTDAHHLPSGTRLRSERNQIGAKRTT 98
K+ TT +HH + RSE ++ G + T
Sbjct: 2 KRNTTNHSHHDERFRQSRSEDSETGLRSRT 31
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 9 KQETTTDAHHLPSGTRLRSERNQIGAKRTT 98
K+ TT +HH + RSE ++ G + T
Sbjct: 2 KRNTTNHSHHDERFRQSRSEDSETGLRSRT 31
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 9 KQETTTDAHHLPSGTRLRSERNQIGAKRTT 98
K+ TT +HH + RSE ++ G + T
Sbjct: 2 KRNTTNHSHHDERFRQSRSEDSETGLRSRT 31
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 9 KQETTTDAHHLPSGTRLRSERNQIGAKRTT 98
K+ TT +HH + RSE ++ G + T
Sbjct: 2 KRNTTNHSHHDERFRQSRSEDSETGLRSRT 31
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 9 KQETTTDAHHLPSGTRLRSERNQIGAKRTT 98
K+ TT +HH + RSE ++ G + T
Sbjct: 2 KRNTTNHSHHDERFRQSRSEDSETGLRSRT 31
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 5.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 9 KQETTTDAHHLPSGTRLRSERNQIGAKRTT 98
K+ TT +HH + RSE ++ G + T
Sbjct: 2 KRNTTNHSHHDERFRQSRSEDSETGLRSRT 31
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 9 KQETTTDAHHLPSGTRLRSERNQIGAKRTT 98
K+ TT +HH + RSE ++ G + T
Sbjct: 2 KRNTTNHSHHDERFRQSRSEDSETGLRSRT 31
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 22.2 bits (45), Expect = 5.6
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +2
Query: 95 YIQSNRTTMNHH*NKIHMTKHLGSC 169
Y+Q T + H + H+T+ + SC
Sbjct: 109 YVQKLDTWVPHELKEKHLTQRINSC 133
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.8 bits (44), Expect = 7.4
Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +1
Query: 289 KKGL-IEYSTIFPPVNTHQRYRNR 357
K+G+ + + IF P+N+ Q+Y R
Sbjct: 86 KQGMFLSRNAIFTPLNSEQKYEVR 109
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.8 bits (44), Expect = 7.4
Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +1
Query: 289 KKGL-IEYSTIFPPVNTHQRYRNR 357
K+G+ + + IF P+N+ Q+Y R
Sbjct: 86 KQGMFLSRNAIFTPLNSEQKYEVR 109
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.8 bits (44), Expect = 7.4
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1
Query: 199 AEPPQPDKQAED 234
A PPQPD+ ++D
Sbjct: 251 ATPPQPDRTSKD 262
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,073
Number of Sequences: 438
Number of extensions: 3976
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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