Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30481
(638 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 179 6e-44
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 177 1e-43
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 175 7e-43
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 141 1e-32
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 140 3e-32
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 136 3e-31
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 134 2e-30
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 132 9e-30
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 115 8e-25
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 108 1e-22
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 107 2e-22
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 107 3e-22
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 103 5e-21
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 80 5e-14
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 79 1e-13
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 77 4e-13
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 64 3e-09
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 43 0.007
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 41 0.029
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 40 0.038
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 40 0.038
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 40 0.038
UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1; Nanoarc... 40 0.067
UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.20
UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyr... 38 0.20
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 37 0.47
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 37 0.47
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 36 0.62
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 35 1.9
UniRef50_A6C4P7 Cluster: Pseudouridine synthase; n=1; Planctomyc... 34 3.3
UniRef50_A1ZUX1 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_Q23462 Cluster: Putative uncharacterized protein; n=2; ... 34 3.3
UniRef50_O86476 Cluster: Clumping factor B precursor; n=31; Stap... 33 4.4
UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;... 33 5.8
UniRef50_Q2H5M1 Cluster: Putative uncharacterized protein; n=1; ... 33 5.8
UniRef50_Q4SIJ5 Cluster: Chromosome 5 SCAF14581, whole genome sh... 33 7.7
UniRef50_Q0IR54 Cluster: Os11g0676800 protein; n=1; Oryza sativa... 33 7.7
UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2; Desulfu... 33 7.7
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 33 7.7
UniRef50_Q3U8K7 Cluster: Histone-lysine N-methyltransferase SUV4... 33 7.7
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 179 bits (435), Expect = 6e-44
Identities = 88/125 (70%), Positives = 98/125 (78%)
Frame = +2
Query: 230 PDETGRPDNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 409
P + G N RVRLL+SKGHSCYRPRR GERKRKSVRGCIVD+ LSVL+LVIV+KG Q+I
Sbjct: 62 PMKQGIMTNGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDSQLSVLSLVIVKKGEQDI 121
Query: 410 PGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRVMSSNACSQPRKEKENAKPRHKAPKIQ 589
PGLTD +PRRLGPKR KIRK+FNLSKEDDVR +P EKE K + KAPKIQ
Sbjct: 122 PGLTDNTIPRRLGPKRVGKIRKMFNLSKEDDVR---QYVIRRPLPEKEGKKAKSKAPKIQ 178
Query: 590 RLVTP 604
RLVTP
Sbjct: 179 RLVTP 183
Score = 118 bits (284), Expect = 1e-25
Identities = 49/69 (71%), Positives = 57/69 (82%)
Frame = +3
Query: 48 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 227
MKLN+SYP TGCQKL E+ DE K+R FY+KRM EV + LGDEWKGYV R+ GGNDKQG
Sbjct: 1 MKLNISYPVTGCQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQG 60
Query: 228 FPMKQGVLT 254
FPMKQG++T
Sbjct: 61 FPMKQGIMT 69
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 177 bits (432), Expect = 1e-43
Identities = 92/125 (73%), Positives = 100/125 (80%)
Frame = +2
Query: 230 PDETGRPDNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 409
P + G + RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++I
Sbjct: 62 PMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 121
Query: 410 PGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRVMSSNACSQPRKEKENAKPRHKAPKIQ 589
PGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR +P KE KPR KAPKIQ
Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVR---QYVVRKP-LNKEGKKPRTKAPKIQ 177
Query: 590 RLVTP 604
RLVTP
Sbjct: 178 RLVTP 182
Score = 125 bits (302), Expect = 8e-28
Identities = 55/69 (79%), Positives = 61/69 (88%)
Frame = +3
Query: 48 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 227
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 228 FPMKQGVLT 254
FPMKQGVLT
Sbjct: 61 FPMKQGVLT 69
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 175 bits (426), Expect = 7e-43
Identities = 89/136 (65%), Positives = 103/136 (75%)
Frame = +2
Query: 230 PDETGRPDNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 409
P + G N+RVRLL+ KGHSCYRPRR GERKRKSVRGCIVD NLS LAL++V+KG ++I
Sbjct: 62 PMKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKDI 121
Query: 410 PGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRVMSSNACSQPRKEKENAKPRHKAPKIQ 589
PGLTD V RRLGPKRAS IRKL+NL+KEDDVR +P EK+ KPR KAPKIQ
Sbjct: 122 PGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVR---QYVVKRPLPEKDGKKPRTKAPKIQ 178
Query: 590 RLVTPGSSAAVERHRL 637
RL+TP +RHRL
Sbjct: 179 RLITP-VVLQRKRHRL 193
Score = 129 bits (312), Expect = 5e-29
Identities = 56/69 (81%), Positives = 63/69 (91%)
Frame = +3
Query: 48 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 227
MKLNVS+PATG QK FEV+D+HKLR FY+KRMGAE+ AD LGDEWKGYV ++AGGNDKQG
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 228 FPMKQGVLT 254
FPMKQGVLT
Sbjct: 61 FPMKQGVLT 69
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 141 bits (342), Expect = 1e-32
Identities = 69/114 (60%), Positives = 83/114 (72%)
Frame = +2
Query: 260 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 439
RVR+LM KGH YRPR+DGE KRKS+RGCIV ++ VLAL +V+KGA EI GLTD NVPR
Sbjct: 72 RVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAGLTDQNVPR 131
Query: 440 RLGPKRASKIRKLFNLSKEDDVRVMSSNACSQPRKEKENAKPRHKAPKIQRLVT 601
RLGPKR +K+R+LF K D V ++ N + K+ K R KAPKIQRLVT
Sbjct: 132 RLGPKRLTKLRRLFGFKKADGVAIVQKNLIRRTWTTKD-GKKRQKAPKIQRLVT 184
Score = 105 bits (251), Expect = 1e-21
Identities = 45/68 (66%), Positives = 55/68 (80%)
Frame = +3
Query: 48 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 227
MK N+SYP TG QK E+ D+ K IF++KRMG VEAD LG+E+KGYVL++ GGNDKQG
Sbjct: 1 MKFNISYPLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQG 60
Query: 228 FPMKQGVL 251
FPM+QGVL
Sbjct: 61 FPMRQGVL 68
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 140 bits (338), Expect = 3e-32
Identities = 63/69 (91%), Positives = 65/69 (94%)
Frame = +3
Query: 48 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 227
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 228 FPMKQGVLT 254
FPMKQGVLT
Sbjct: 61 FPMKQGVLT 69
Score = 65.7 bits (153), Expect = 9e-10
Identities = 47/135 (34%), Positives = 71/135 (52%)
Frame = +2
Query: 230 PDETGRPDNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 409
P + G + R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 62 PMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS-- 118
Query: 410 PGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRVMSSNACSQPRKEKENAKPRHKAPKIQ 589
P RLGP R+S I K++ L +EDD V+ + +K+++NA A ++
Sbjct: 119 --------PCRLGPVRSSNISKIYYLCEEDD-EVIPVKLQRRHQKKRQNATKEAIAEYVK 169
Query: 590 RLVTPGSSAAVERHR 634
LV + R R
Sbjct: 170 LLVKRKKESKANRGR 184
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 136 bits (330), Expect = 3e-31
Identities = 72/123 (58%), Positives = 86/123 (69%)
Frame = +2
Query: 233 DETGRPDNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIP 412
D+ G RVR+LM KGH YRPR+DGE KRKS+RGCIV ++ VLAL +V+KGA EI
Sbjct: 68 DKQGVLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIA 127
Query: 413 GLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRVMSSNACSQPRKEKENAKPRHKAPKIQR 592
GLTD NVPRRLGPKR +K+R+LF K D RV+S S+ + K R KAPKIQR
Sbjct: 128 GLTDQNVPRRLGPKRLTKLRRLFGFKKAD--RVIS----SEEHGPQRYGKKRQKAPKIQR 181
Query: 593 LVT 601
LVT
Sbjct: 182 LVT 184
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 134 bits (324), Expect = 2e-30
Identities = 70/116 (60%), Positives = 81/116 (69%)
Frame = +2
Query: 254 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNV 433
N+RVRLL KG CYRPR+ GE++RKSVRGCIV +LS L L +V+KG EIPGLTD V
Sbjct: 111 NNRVRLLFKKGMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKKGTNEIPGLTDKAV 170
Query: 434 PRRLGPKRASKIRKLFNLSKEDDVRVMSSNACSQPRKEKENAKPRHKAPKIQRLVT 601
++LGPKRA+KIRKLFNL K DDVR R +N K R PKIQRLVT
Sbjct: 171 GKKLGPKRATKIRKLFNLDKTDDVRKYVIG-----RAISKNGKNRFIKPKIQRLVT 221
Score = 88.2 bits (209), Expect = 1e-16
Identities = 41/69 (59%), Positives = 48/69 (69%)
Frame = +3
Query: 48 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 227
MKLN+S P QK E+ DE KL F EKR+G V D +G+E+ GYV R+ GGNDKQG
Sbjct: 42 MKLNISNPLNNVQKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGNDKQG 101
Query: 228 FPMKQGVLT 254
FPM QGVLT
Sbjct: 102 FPMMQGVLT 110
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 132 bits (318), Expect = 9e-30
Identities = 68/125 (54%), Positives = 85/125 (68%)
Frame = +2
Query: 230 PDETGRPDNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 409
P + G RVRLL+S+GHSC+ RR G RKRKSVRGCIV ++ VLAL IV+KG EI
Sbjct: 62 PMKQGVMVRGRVRLLLSEGHSCFTSRRSGFRKRKSVRGCIVGPDMRVLALQIVKKGVAEI 121
Query: 410 PGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRVMSSNACSQPRKEKENAKPRHKAPKIQ 589
GLT +PR+LGPKRA+ I+KLF L KEDD ++ + + K + K R K PKIQ
Sbjct: 122 DGLTTVTLPRKLGPKRANNIKKLFGLKKEDDPILIKKSVIRRTFKTAK-GKDRTKCPKIQ 180
Query: 590 RLVTP 604
RL+TP
Sbjct: 181 RLITP 185
Score = 103 bits (247), Expect = 4e-21
Identities = 44/68 (64%), Positives = 53/68 (77%)
Frame = +3
Query: 48 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 227
MK N+SYP TG QK E+ D+ K IF +K+MG EVE D LGDE+KGYV ++AGGNDK G
Sbjct: 1 MKFNISYPLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDG 60
Query: 228 FPMKQGVL 251
FPMKQGV+
Sbjct: 61 FPMKQGVM 68
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 115 bits (277), Expect = 8e-25
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = +3
Query: 48 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 227
MKLN+S+PATGCQKL E DE K R FYEK M +EV AD LG+EWKGY++R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQG 60
Query: 228 FPMKQGVLT 254
FPMKQ VLT
Sbjct: 61 FPMKQDVLT 69
Score = 59.3 bits (137), Expect = 8e-08
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = +2
Query: 401 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD 502
++IPGLTD PR +GPKRAS+IRKLFNLSKEDD
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSKEDD 113
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 108 bits (259), Expect = 1e-22
Identities = 59/119 (49%), Positives = 80/119 (67%), Gaps = 2/119 (1%)
Frame = +2
Query: 254 NSRVRLLMSKGHSCYRPRR--DGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDG 427
+SRV LL+ +G + R GER+RK+VRGC++ ++++++ + I + G Q I G+TD
Sbjct: 71 SSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVGDQPIEGVTDT 130
Query: 428 NVPRRLGPKRASKIRKLFNLSKEDDVRVMSSNACSQPRKEKENAKPRHKAPKIQRLVTP 604
PRRLGPKRASKIRKLFNLS+ +DVR + R K K R KAPKIQRL+TP
Sbjct: 131 TAPRRLGPKRASKIRKLFNLSRTEDVR----KYVVRRRVVKSGKKDRLKAPKIQRLITP 185
Score = 72.9 bits (171), Expect = 6e-12
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +3
Query: 48 MKLNVSYPATGCQKLFEVVDEHKLRI-FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQ 224
MKLN++YP G K FE+ DE R+ + R+G EV+ G E+KGY+ R+ GG+DK
Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60
Query: 225 GFPMKQGVLTTA 260
GFPM GVL ++
Sbjct: 61 GFPMVPGVLASS 72
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 107 bits (258), Expect = 2e-22
Identities = 56/115 (48%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
Frame = +2
Query: 260 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 439
R+RLL+ G SCYRPR+DGERKRK+VRGCI+ +S L V+++KG +EI GLT VPR
Sbjct: 72 RIRLLLKTGASCYRPRKDGERKRKTVRGCIISDEISALHCVVLQKGEKEIDGLTTTAVPR 131
Query: 440 RLGPKRASKIRKLFNLSKEDDVRVMSSNACSQPRKEKENAKP-RHKAPKIQRLVT 601
R GPKRAS +R +F ++ D + +S K KP + +PK+QRL+T
Sbjct: 132 RFGPKRASTLRAMFGIT---DSKFDASKLVL-----KREVKPGKFTSPKVQRLIT 178
Score = 82.6 bits (195), Expect = 7e-15
Identities = 33/69 (47%), Positives = 50/69 (72%)
Frame = +3
Query: 48 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 227
M++ ++YP G Q + ++ D L YEKR+G ++E ++LG ++KGY+ R+ GG DKQG
Sbjct: 1 MRITLAYPENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQG 60
Query: 228 FPMKQGVLT 254
FPMKQGV+T
Sbjct: 61 FPMKQGVIT 69
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 107 bits (256), Expect = 3e-22
Identities = 50/93 (53%), Positives = 69/93 (74%)
Frame = +2
Query: 230 PDETGRPDNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 409
P TG N+RVRLL+ + CY+P R+GER+RK+VRG IV ++SVL ++V+KG EI
Sbjct: 61 PMMTGVATNNRVRLLLDGRNGCYKPLRNGERRRKTVRGAIVAGDISVLNTIVVKKGEGEI 120
Query: 410 PGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVR 508
G+T+ +P R GP+RAS RKLFNLS++DDV+
Sbjct: 121 EGVTNDALPMRAGPQRASHFRKLFNLSQKDDVK 153
Score = 85.4 bits (202), Expect = 1e-15
Identities = 38/68 (55%), Positives = 49/68 (72%)
Frame = +3
Query: 51 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGF 230
K+NV+YPATG K F+ +E R F +KR+G EV+A LGDE+KGY+L++ GG DK GF
Sbjct: 1 KINVAYPATGRIKKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGF 60
Query: 231 PMKQGVLT 254
PM GV T
Sbjct: 61 PMMTGVAT 68
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 103 bits (246), Expect = 5e-21
Identities = 58/130 (44%), Positives = 79/130 (60%), Gaps = 5/130 (3%)
Frame = +2
Query: 254 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNV 433
+ R RLL+ +G CY RR+GERKRKS+RGCIV +L L++V+V G + +PGLTD V
Sbjct: 76 SQRARLLLRQGAKCYLHRRNGERKRKSIRGCIVGPDLHALSVVLVDAGDKTLPGLTDVVV 135
Query: 434 PRRLGPKRASKIRKLFNL-----SKEDDVRVMSSNACSQPRKEKENAKPRHKAPKIQRLV 598
P+RL PKRASKIR+LF L +D + V +N + + K PK+QR+V
Sbjct: 136 PKRLVPKRASKIRRLFGLPTTKVDPKDQMLVCELIKELGHEVTLKNGEKKLKYPKVQRVV 195
Query: 599 TPGSSAAVER 628
T A +R
Sbjct: 196 TDEKYARKQR 205
Score = 66.1 bits (154), Expect = 7e-10
Identities = 30/67 (44%), Positives = 40/67 (59%)
Frame = +3
Query: 51 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGF 230
K+N+S P TG K + D K + + RM +E + LG+E+ G R+ GGND QGF
Sbjct: 8 KVNISNPVTGANKSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGF 67
Query: 231 PMKQGVL 251
PM QGVL
Sbjct: 68 PMYQGVL 74
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 79.8 bits (188), Expect = 5e-14
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +3
Query: 48 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWK 185
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 78.6 bits (185), Expect = 1e-13
Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 5/126 (3%)
Frame = +2
Query: 230 PDETGRPDNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 409
P +G RVR L+SKG + YR RR G R+RKSVRG IV + VL L+I+R G +EI
Sbjct: 47 PMVSGHLTKKRVRPLLSKGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIILRPGEKEI 106
Query: 410 PGLTDGNVPRRLGPKRASKIRKLFNLSKEDD-----VRVMSSNACSQPRKEKENAKPRHK 574
GLT+ P++ K+RK+F + E+ +R + + C P+K K RH
Sbjct: 107 DGLTNAVNDVSHLPRKEKKLRKMFGVPDEEKNVVGYIRNILKSECDDPKK---IPKIRHN 163
Query: 575 APKIQR 592
+++R
Sbjct: 164 GKRMKR 169
Score = 51.6 bits (118), Expect = 2e-05
Identities = 21/55 (38%), Positives = 39/55 (70%)
Frame = +3
Query: 90 LFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLT 254
+FE+ +++R+ Y+K++G + + LG+E++G ++ + GG+D QGFPM G LT
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLT 54
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 77.0 bits (181), Expect = 4e-13
Identities = 31/69 (44%), Positives = 47/69 (68%)
Frame = +3
Query: 48 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 227
MK N++ P+TG Q E+ DE KLRI Y K++ ++++ +G EW + + GG DKQG
Sbjct: 1 MKFNIANPSTGVQHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQG 60
Query: 228 FPMKQGVLT 254
FPMK+G+L+
Sbjct: 61 FPMKEGILS 69
Score = 64.1 bits (149), Expect = 3e-09
Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Frame = +2
Query: 212 QRQARIPDETGRPDNSRVRLLMSKGHSCYR--PRRDGERKRKSVRGCIVDANLSVLALVI 385
Q + P + G SRV++L+ KG + R + GER RKSVRGCIV +SVL + +
Sbjct: 56 QDKQGFPMKEGILSPSRVKILLKKGSTGCRGYKMKKGERCRKSVRGCIVSPEISVLNIKL 115
Query: 386 VRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRVMSSNACSQPRKEKENAKP 565
+ ++ +T+ N + L KR+S +RK+ L+K DD+R + + AK
Sbjct: 116 LTNKNDDLL-ITNKNSEKTLTHKRSSNLRKVLCLTKTDDIR----------KHYIKIAKD 164
Query: 566 RHKAPKIQRLVTP 604
KIQRL+TP
Sbjct: 165 FKNKVKIQRLITP 177
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 64.1 bits (149), Expect = 3e-09
Identities = 45/125 (36%), Positives = 67/125 (53%)
Frame = +2
Query: 260 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 439
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K P
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 67
Query: 440 RLGPKRASKIRKLFNLSKEDDVRVMSSNACSQPRKEKENAKPRHKAPKIQRLVTPGSSAA 619
RLGP R+S I K++ L +EDD V+ + +K+++NA A ++ LV +
Sbjct: 68 RLGPVRSSNISKIYYLCEEDD-EVIPVKLQRRHQKKRQNATKEAIAEYVKLLVKRKKESK 126
Query: 620 VERHR 634
R R
Sbjct: 127 ANRGR 131
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 42.7 bits (96), Expect = 0.007
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Frame = +2
Query: 260 RVRLLMSKGHS-CYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVP 436
RV LL++ HS Y+P R E S++ V +S+L +VI+ G ++IPG T
Sbjct: 61 RVHLLLNNLHSYIYKPLRTREMNYTSLQDA-VKLPISLLNMVIIINGRKDIPGQT----- 114
Query: 437 RRLGPKRASKIRKLFNLSKEDDVRVMSSNACSQPRKEKENAKPRHKAPKIQ 589
+R PKR +I+ F++S + V+S+ +P + K++ KPR K K+Q
Sbjct: 115 KRWAPKRWRRIQS-FSVSLK---TVLST---KKP-QNKDSKKPRPKTHKVQ 157
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 40.7 bits (91), Expect = 0.029
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +3
Query: 138 RMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTTAVF 266
++G E LG KGY LR+ GG+DK GFPMK+ V T F
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKEDVDGTRRF 70
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 40.3 bits (90), Expect = 0.038
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +3
Query: 87 KLFEV-VDEHKLRIFYEKRMGAEVEADQLGDEW-KGYVLRVAGGNDKQGFPMKQGV 248
K F++ ++ R F KR+G V A LG E KG L + GG+D+ GFPM+ +
Sbjct: 133 KAFQITIEGENARKFIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRPDI 188
Score = 33.1 bits (72), Expect = 5.8
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +2
Query: 179 MEGLCTSCRWRQRQARIPDETGRPDNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDA 358
++GL R ++ P P + R L+S G + PR GER+RK+VRG +
Sbjct: 166 LKGLQLEIRGGSDESGFPMRPDIPGPVKKRALLS-GPPGFWPREKGERRRKTVRGNTISE 224
Query: 359 NLSVLALVIVRK 394
++ + IV++
Sbjct: 225 DIVQINTKIVKQ 236
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 40.3 bits (90), Expect = 0.038
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +3
Query: 48 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 227
MK+N++ P G Q + DE I K +G +E LG+++ + GG+DKQG
Sbjct: 1 MKINIADPILGTQYSIKRDDEFIEHIIGRK-IGDTIEGSILGEDFSRNEFLINGGHDKQG 59
Query: 228 FPMKQGVLT 254
F +K+ + T
Sbjct: 60 FLLKKNLNT 68
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 40.3 bits (90), Expect = 0.038
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +2
Query: 248 PDNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 397
P +R RLL+S G +RP+ G RKRK VRG ++ ++ + V+V+ G
Sbjct: 68 PGTARRRLLLSGGVG-FRPKEKGLRKRKGVRGRVISKDILQINTVVVKHG 116
>UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S6e -
Nanoarchaeum equitans
Length = 126
Score = 39.5 bits (88), Expect = 0.067
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +3
Query: 42 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDK 221
+V+K+ VS P +G E + L Y K++G ++ ++G + GY L++ GG+D
Sbjct: 5 SVVKIVVSDPKSGKAIQIETKEPQWL---YGKKIGDTIDGSKIGLD--GYELKITGGSDI 59
Query: 222 QGFPMKQGV 248
GFPM++ V
Sbjct: 60 AGFPMRKEV 68
>UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1;
Burkholderia multivorans ATCC 17616|Rep: Putative
uncharacterized protein - Burkholderia multivorans ATCC
17616
Length = 165
Score = 37.9 bits (84), Expect = 0.20
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 8/116 (6%)
Frame = +2
Query: 224 RIPDETG----RPD--NSRVRLLM--SKGHSCYRPRRDGERKRKSVRGCIVDANLSVLAL 379
R+P+E G RPD V+ + GH+ R R R R+ GC +DA L
Sbjct: 49 RVPEEIGQHEFRPDVVGQHVQCAGHGAVGHAEQRRGRHRRRYRREHAGCGIDAERRERRL 108
Query: 380 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRVMSSNACSQPRKE 547
+ A P RR+GP RA +++ L + V + C+QP +E
Sbjct: 109 TDASRRAVRAPLRRPVGARRRVGPCRARRMKDLQGPCSDSRSGVPARRRCAQPGQE 164
>UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S6e - Aeropyrum pernix
Length = 235
Score = 37.9 bits (84), Expect = 0.20
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +2
Query: 179 MEGLCTSCRWRQRQARIPDETGRPDNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIV 352
M GL R IP G P + R ++L++ G + PR GER+RKSVRG ++
Sbjct: 153 MPGLKFKIRGGTDATGIPMHPGVPGSGRYKVLLA-GPPGFHPRERGERRRKSVRGRMI 209
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 36.7 bits (81), Expect = 0.47
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 260 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIV 388
RV++L+S+G +RPR GER++K+V G + N+ + + IV
Sbjct: 83 RVKILLSRGPG-FRPRERGERRKKTVHGNTISPNIVQVNMKIV 124
Score = 35.5 bits (78), Expect = 1.1
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Frame = +3
Query: 42 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLG---DEWKGYV------ 194
A KL +S P G K E+ ++ +R+G E+ A +LG E G
Sbjct: 2 ATFKLVISNPKNGVAKQVEISGPEADKLI-GRRIGEEIPASELGLNLSEIFGEEIPADAK 60
Query: 195 LRVAGGNDKQGFPMKQGV 248
L++ GG DK GFPM+ V
Sbjct: 61 LKITGGTDKDGFPMRPDV 78
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 36.7 bits (81), Expect = 0.47
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +3
Query: 42 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDK 221
A ++ V+ P +G FEV D F + +GA V+ +G + GY + + GG+D
Sbjct: 2 ATFQVAVADPESGRTYQFEV-DGQDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSDD 58
Query: 222 QGFPMKQGV 248
G PM++ V
Sbjct: 59 AGRPMREDV 67
Score = 35.5 bits (78), Expect = 1.1
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +2
Query: 233 DETGRP-----DNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 397
D+ GRP D S + ++ +G + + P DGERKR +VRG V ++ L + I G
Sbjct: 57 DDAGRPMREDVDGSDLMEVLLEGGAGFNPDEDGERKRVTVRGKEVSEAVAQLNVAIDEHG 116
Query: 398 AQEIPGL 418
+ + L
Sbjct: 117 EEPVAEL 123
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 36.3 bits (80), Expect = 0.62
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = +2
Query: 260 RVRLLMSKGHSCYRPRRDGERKRKSVRG 343
RVR+L+SKG +RP+ GER++K+VRG
Sbjct: 83 RVRVLLSKGPG-FRPKEKGERRKKTVRG 109
Score = 35.1 bits (77), Expect = 1.4
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Frame = +3
Query: 42 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQL--------GDEWKGYV- 194
A KL +S P +G K E+ ++ KR+G ++ A +L G E+ V
Sbjct: 2 ATFKLVISDPKSGIAKQVEITGAETEKLI-GKRIGDQIPAKELNINLNELFGKEFPEDVK 60
Query: 195 LRVAGGNDKQGFPMKQGV 248
L + GG DK GFPM+ +
Sbjct: 61 LEIRGGTDKDGFPMRPDI 78
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 34.7 bits (76), Expect = 1.9
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 335 LIYVFSLHRGAVCNMSGPLTSEDEHGCC-QDALFHRESLLVVAASDTKYIALPFI 174
L F+L + L E EH Q AL H E+LLVV D + ++LPF+
Sbjct: 157 LASAFTLASAVAAEAARALGHEQEHTLVRQHALLHAEALLVVTTHDLEDVSLPFL 211
>UniRef50_A6C4P7 Cluster: Pseudouridine synthase; n=1; Planctomyces
maris DSM 8797|Rep: Pseudouridine synthase -
Planctomyces maris DSM 8797
Length = 352
Score = 33.9 bits (74), Expect = 3.3
Identities = 25/102 (24%), Positives = 41/102 (40%)
Frame = +2
Query: 257 SRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVP 436
S ++ L +G S + E + + +R + V+ LV +R G + L G
Sbjct: 184 SGLKYLKKQGKSAFLELTLHEGQNREIRRMMARIGHKVIQLVRIRFGPLNLGKLKTGE-S 242
Query: 437 RRLGPKRASKIRKLFNLSKEDDVRVMSSNACSQPRKEKENAK 562
RRL K+R+L N D+R + P K + K
Sbjct: 243 RRLSDTELKKLRQLLNEKHSPDIRHRKGKKNAAPAKTRAPRK 284
>UniRef50_A1ZUX1 Cluster: Putative uncharacterized protein; n=1;
Microscilla marina ATCC 23134|Rep: Putative
uncharacterized protein - Microscilla marina ATCC 23134
Length = 362
Score = 33.9 bits (74), Expect = 3.3
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = -2
Query: 517 RHNTYIIFFAKVEQLTDFGSTFGT*TAGYISISQSRN-FLGTLAHNNKSQDREIGVNNTS 341
R+N Y+ T FG+T AGY + + SRN F+G A N++ ++ ++N+S
Sbjct: 171 RYNAYLGEATGYTNTTGFGNTLLGARAGYKNAAGSRNVFIGYFAGYNETGSNKLYIDNSS 230
Query: 340 T 338
T
Sbjct: 231 T 231
>UniRef50_Q23462 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 532
Score = 33.9 bits (74), Expect = 3.3
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +2
Query: 401 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRVMSSNACSQPRKEKENAKPRHK 574
Q P + D N R PK K K+ +LS ++ + C +P KEKE K R K
Sbjct: 109 QLYPEMFDSNQKPRQKPKEVKKALKVESLSDYENDDKENVPPCGKPSKEKEEKKQRTK 166
>UniRef50_O86476 Cluster: Clumping factor B precursor; n=31;
Staphylococcus aureus|Rep: Clumping factor B precursor -
Staphylococcus aureus
Length = 913
Score = 33.5 bits (73), Expect = 4.4
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 51 KLNVSYPAT-GCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 227
KL+ SY A L EV D+ K RI+YE A ++ GD K YV+ V G D G
Sbjct: 441 KLSDSYYADPNDSNLKEVTDQFKNRIYYEHPNVASIK---FGDITKTYVVLVEGHYDNTG 497
Query: 228 FPMKQGVL 251
+K V+
Sbjct: 498 KNLKTQVI 505
>UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;
n=24; Bacteria|Rep: Phytoene dehydrogenase-related
protein - Rhodopseudomonas palustris
Length = 590
Score = 33.1 bits (72), Expect = 5.8
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -3
Query: 252 SGRPVSSGILACRCRQ-RHEVHSPSIHRLTDQPL 154
SGRPV+SGILA C Q +++ +P HR + P+
Sbjct: 22 SGRPVTSGILASLCEQWQNQPRTPLSHRSGNLPM 55
>UniRef50_Q2H5M1 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 494
Score = 33.1 bits (72), Expect = 5.8
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 179 MEGLCTSCRWRQRQARIPDETGRPDNSRVRLLMSKGHSC 295
+ G C +CR R+ + +P + GRP+ R +S GH+C
Sbjct: 6 LSGYCLTCRKRRVKCDVPADKGRPNCGR---CISSGHTC 41
>UniRef50_Q4SIJ5 Cluster: Chromosome 5 SCAF14581, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 5
SCAF14581, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 146
Score = 32.7 bits (71), Expect = 7.7
Identities = 25/79 (31%), Positives = 37/79 (46%)
Frame = +2
Query: 401 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRVMSSNACSQPRKEKENAKPRHKAP 580
QEI G V + L AS ++ L NL K+ + +M S+A QP + + P+ +AP
Sbjct: 18 QEIQGSLK-QVQKLLSAHEASYLQSLRNLRKK--INLMQSSATKQPPRATNSTCPKLEAP 74
Query: 581 KIQRLVTPGSSAAVERHRL 637
R + S E H L
Sbjct: 75 ANGRKLGKSQSVGHEVHFL 93
>UniRef50_Q0IR54 Cluster: Os11g0676800 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0676800 protein -
Oryza sativa subsp. japonica (Rice)
Length = 822
Score = 32.7 bits (71), Expect = 7.7
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 326 RKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKE 496
+KS + C N ++ LV++RKG + LT G + K S RK+ N+SK+
Sbjct: 227 KKSSQSCSGRLNSYIVVLVMLRKGGWKSQQLTIGLARHEVAVKIRSLNRKIENISKD 283
>UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S6e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 217
Score = 32.7 bits (71), Expect = 7.7
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 248 PDNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIV 388
P + R+L+S G + PR GER+RK+VRG + ++ + VIV
Sbjct: 167 PGPVKKRVLLS-GPPGFHPREKGERRRKTVRGNTITHDIVQINTVIV 212
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 32.7 bits (71), Expect = 7.7
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +3
Query: 141 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 248
+G+E +A LG E K +R+ GG+DK G PM+ V
Sbjct: 39 IGSEADATALGLEGK---IRITGGSDKSGVPMRPDV 71
>UniRef50_Q3U8K7 Cluster: Histone-lysine N-methyltransferase
SUV420H1 (EC 2.1.1.43) (Suppressor of variegation 4-20
homolog 1) (Suv4-20h1) (Su(var)4-20 homolog 1); n=19;
Tetrapoda|Rep: Histone-lysine N-methyltransferase
SUV420H1 (EC 2.1.1.43) (Suppressor of variegation 4-20
homolog 1) (Suv4-20h1) (Su(var)4-20 homolog 1) - Mus
musculus (Mouse)
Length = 883
Score = 32.7 bits (71), Expect = 7.7
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 452 KRASKIRKLFNLSKEDDVRVMSSNACSQPRKEKENAKPRHKA 577
KR ++++KL + SK D + +SSN + +EK+NA K+
Sbjct: 357 KRLNRLKKLGDSSKNSDSQSVSSNTDADTTQEKDNATSNRKS 398
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,341,975
Number of Sequences: 1657284
Number of extensions: 14262989
Number of successful extensions: 44231
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 42570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44195
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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