Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30479
         (392 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370035-1|ABD18596.1|   93|Anopheles gambiae defensin protein.        24   2.3  
AY973195-1|AAY41589.1|   80|Anopheles gambiae defensin 2 protein.      23   5.3  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    22   9.2  

>DQ370035-1|ABD18596.1|   93|Anopheles gambiae defensin protein.
          Length = 93

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -2

Query: 343 NKTSVTEAVTIKRLAFMATSKLYTLCATKINGTGVRVES 227
           ++ SV     I   +F+A + +  +CA  ++GT V ++S
Sbjct: 2   DQCSVPRLCIIIMKSFIAAAVIALICAIAVSGTTVTLQS 40


>AY973195-1|AAY41589.1|   80|Anopheles gambiae defensin 2 protein.
          Length = 80

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -2

Query: 301 AFMATSKLYTLCATKINGTGVRVES 227
           +F+A + +  +CA  ++GT V ++S
Sbjct: 3   SFIAAAVIALICAIAVSGTTVTLQS 27


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 293 HERQTFNCDGFSNRSF 340
           HE +  NC+G+S + F
Sbjct: 337 HECKPCNCNGYSTKCF 352


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 396,111
Number of Sequences: 2352
Number of extensions: 7351
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30784536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)