Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30479
         (392 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021472-7|CAA16303.2|  283|Caenorhabditis elegans Hypothetical ...    28   2.7  
Z66521-1|CAA91393.2|  382|Caenorhabditis elegans Hypothetical pr...    27   4.8  

>AL021472-7|CAA16303.2|  283|Caenorhabditis elegans Hypothetical
           protein Y17D7B.6 protein.
          Length = 283

 Score = 27.9 bits (59), Expect = 2.7
 Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +2

Query: 230 FNADTCAI-YFCCTECIKFGCCHERQTFNCDGFSNRSFVSDDNQ*FNVYN 376
           F +++C I YF  T C+ +   ++ +T   +  SN ++V+      N+ N
Sbjct: 53  FGSESCIIAYFSLTTCVFYNYVNDGKTITVEENSNNAYVAIKTNISNIPN 102


>Z66521-1|CAA91393.2|  382|Caenorhabditis elegans Hypothetical
           protein W02B12.1 protein.
          Length = 382

 Score = 27.1 bits (57), Expect = 4.8
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 290 CHERQTFNCDGFSNRSFVSDDNQ 358
           C    TF CD  SN+ F  DD Q
Sbjct: 236 CEGLHTFECDCESNKQFTDDDIQ 258


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,614,107
Number of Sequences: 27780
Number of extensions: 177170
Number of successful extensions: 440
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 440
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)