Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30478
         (731 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    36   3e-04
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    34   0.001
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    30   0.017
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    25   0.63 
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    25   0.63 
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    25   0.63 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    25   0.83 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.1  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   3.4  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.4  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   3.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   3.4  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   4.4  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    22   4.4  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   7.8  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   7.8  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 35.9 bits (79), Expect = 3e-04
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = +1

Query: 1   AQAPYVWNPTTGDLVXYDDARSVIEKGKYVRNNKLGGLFAW 123
           AQ PY ++ T  + V YDD +S+  K KY ++N L G+  W
Sbjct: 302 AQVPYKYDGT--NWVSYDDEQSIGLKAKYAKDNGLAGVAVW 340


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 33.9 bits (74), Expect = 0.001
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +1

Query: 43  VXYDDARSVIEKGKYVRNNKLGGLFAW 123
           V YDD+ SV +K  YV+   LGG+F W
Sbjct: 487 VGYDDSESVEKKVNYVQEMNLGGVFIW 513



 Score = 29.5 bits (63), Expect = 0.029
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 43   VXYDDARSVIEKGKYVRNNKLGGLFAW 123
            V ++D +SV +K +Y++    GG  AW
Sbjct: 939  VGFEDIKSVRDKAEYIKTKGFGGAVAW 965



 Score = 26.6 bits (56), Expect = 0.21
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 10   PYVWNPTTGDLVXYDDARSVIEKGKYVRNNKLGGLFAW 123
            PY +   +   V YDD   +  K + V+  KLGG   W
Sbjct: 2626 PYAY--LSNQWVSYDDIAEIRRKSRLVKALKLGGGMVW 2661



 Score = 25.0 bits (52), Expect = 0.63
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 43   VXYDDARSVIEKGKYVRNNKLGGLFAW 123
            V +DD   +  K +++R   LGG   W
Sbjct: 1712 VSFDDREMIKRKSEFIRKMDLGGGMIW 1738



 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 34   GDLVXYDDARSVIEKGKYVRNNKLGGLFAWEHRR*QW 144
            G L  Y+   +VI+KG  V  ++ G +  + + R QW
Sbjct: 2100 GFLAYYEICTNVIKKGWKVVRDRRGRIGPYAYLRDQW 2136



 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 43   VXYDDARSVIEKGKYVRNNKLGGLFAW 123
            V +DD   +  K ++++   LGG   W
Sbjct: 2137 VSFDDIGMIRHKSEFIKAMGLGGGMIW 2163


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 30.3 bits (65), Expect = 0.017
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +1

Query: 4   QAPYVWNPTTGDLVXYDDARSVIEKGKYVRNNKLGGLFAW 123
           + PY++  T    + YD+ +SV  K +Y +   L G+F W
Sbjct: 313 KVPYMYEDTFW--IGYDNEQSVTIKTEYAKEKNLAGVFIW 350


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 49  YDDARSVIEKGKYVRNNKLGGLFAW 123
           +DD +S+  K ++     LGG+  W
Sbjct: 332 FDDPKSIQVKVEFANEKNLGGVMVW 356


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 49  YDDARSVIEKGKYVRNNKLGGLFAW 123
           +DD +S+  K ++  +  LGG+  W
Sbjct: 333 FDDPKSIQLKVEFANSKNLGGVMVW 357


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 49  YDDARSVIEKGKYVRNNKLGGLFAW 123
           +DD +S+  K ++  +  LGG+  W
Sbjct: 333 FDDPKSIQLKVEFANSKNLGGVMVW 357


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 43  VXYDDARSVIEKGKYVRNNKLGGLFAW 123
           V +DD RS+  K  +++    GG+  W
Sbjct: 831 VGFDDERSLKTKMAWLKEEGFGGIMIW 857


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 272 FFLYLHDLFSERFVIVIMIKIVFLC 346
           +F Y+H LF   F+I  M  +  LC
Sbjct: 260 YFYYMHLLFCCAFIIFTMHLLFLLC 284


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 22  NPTTGDLVXYDDARSVIEKGKYVRNNKLGGL 114
           N   G  V Y+D  +   K  Y R   LGG+
Sbjct: 372 NGEGGAWVGYEDPDTAGNKASYARAKGLGGI 402


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 22  NPTTGDLVXYDDARSVIEKGKYVRNNKLGGL 114
           N   G  V Y+D  +   K  YV+   LGG+
Sbjct: 380 NNNGGFWVGYEDTDTAGYKASYVKAKGLGGI 410


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 140 CQRLCSQANSPPSLL 96
           C   C QAN  PS+L
Sbjct: 310 CASTCEQANDTPSIL 324


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 140 CQRLCSQANSPPSLL 96
           C   C QAN  PS+L
Sbjct: 310 CASTCEQANDTPSIL 324


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 379 HNAKPHTASYETK 341
           H+A P TAS ETK
Sbjct: 119 HSAAPRTASRETK 131


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 133 VYVPKRTVHQAYCSSRISPSQ 71
           V +P+RT   A  +S  SPSQ
Sbjct: 200 VPIPQRTASTASSASNYSPSQ 220


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 176 LSPYS*RSGYRHCQRLCSQANSP 108
           +S Y+  + YRH Q + + AN+P
Sbjct: 2   VSYYNSTNMYRHQQAVAAPANAP 24


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 176 LSPYS*RSGYRHCQRLCSQANSP 108
           +S Y+  + YRH Q + + AN+P
Sbjct: 2   VSYYNSTNMYRHQQAVAAPANAP 24


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,441
Number of Sequences: 336
Number of extensions: 2944
Number of successful extensions: 21
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)