Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30478
         (731 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118784-1|AAM50644.1|  268|Drosophila melanogaster GH13872p pro...    35   0.099
AE013599-3116|AAF46663.2|  476|Drosophila melanogaster CG9357-PA...    35   0.099
AE013599-3117|AAM68191.1|  470|Drosophila melanogaster CG30293-P...    30   2.8  
AY089362-1|AAL90100.1|  470|Drosophila melanogaster AT18578p pro...    30   3.7  
AE014297-329|AAF51971.2| 1264|Drosophila melanogaster CG1347-PA,...    29   4.9  
BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p pro...    29   8.6  
AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-P...    29   8.6  

>AY118784-1|AAM50644.1|  268|Drosophila melanogaster GH13872p
           protein.
          Length = 268

 Score = 35.1 bits (77), Expect = 0.099
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 4   QAPYVWNPTTGDLVXYDDARSVIEKGKYVRNNKLGGLFAW 123
           Q PY +       V Y+D RS+  K +YV +N LGG+  W
Sbjct: 129 QVPYAYRQR--QWVGYEDPRSLALKAQYVMDNHLGGIMIW 166


>AE013599-3116|AAF46663.2|  476|Drosophila melanogaster CG9357-PA
           protein.
          Length = 476

 Score = 35.1 bits (77), Expect = 0.099
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 4   QAPYVWNPTTGDLVXYDDARSVIEKGKYVRNNKLGGLFAW 123
           Q PY +       V Y+D RS+  K +YV +N LGG+  W
Sbjct: 337 QVPYAYRQR--QWVGYEDPRSLALKAQYVMDNHLGGIMIW 374


>AE013599-3117|AAM68191.1|  470|Drosophila melanogaster CG30293-PA
           protein.
          Length = 470

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +1

Query: 1   AQAPYVWNPTTGDL-VXYDDARSVIEKGKYVRNNKLGGLFAW 123
           A+ PY    T GD  V Y++ RS+  K   ++ +KLGG  AW
Sbjct: 312 AKVPYA---TRGDQWVSYENPRSIWAKMHLLQEHKLGGAMAW 350


>AY089362-1|AAL90100.1|  470|Drosophila melanogaster AT18578p
           protein.
          Length = 470

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 1   AQAPYVWNPTTGDL-VXYDDARSVIEKGKYVRNNKLGGLFAW 123
           A+ PY    T GD  V Y+  RS+  K   ++ +KLGG  AW
Sbjct: 312 AKVPYA---TRGDQWVSYESPRSIWAKMHLLQEHKLGGAMAW 350


>AE014297-329|AAF51971.2| 1264|Drosophila melanogaster CG1347-PA,
            isoform A protein.
          Length = 1264

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 15/66 (22%), Positives = 34/66 (51%)
 Frame = -3

Query: 300  LNKSCKYKKKRLDCERXKSQSFLIPISYSNPNQTS*P*AEFPKPIFIAFRISPLSASMFP 121
            L++ C+Y  ++ + ++        P++ ++PNQT  P    P+P  I   + P + ++  
Sbjct: 1145 LSERCRYISRQ-ELDQPAEAESTAPVAETSPNQTIQPEDPDPEPETITIYVPPNAPAVLT 1203

Query: 120  SEQSTK 103
            +  ST+
Sbjct: 1204 ATPSTR 1209


>BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p
           protein.
          Length = 2286

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 43  VXYDDARSVIEKGKYVRNNKLGGLFAW 123
           V Y+D  S   K +Y  NN   G+ AW
Sbjct: 534 VGYEDPTSAQAKARYAANNNFAGVAAW 560


>AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-PA
           protein.
          Length = 2286

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 43  VXYDDARSVIEKGKYVRNNKLGGLFAW 123
           V Y+D  S   K +Y  NN   G+ AW
Sbjct: 534 VGYEDPTSAQAKARYAANNNFAGVAAW 560


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,739,938
Number of Sequences: 53049
Number of extensions: 522071
Number of successful extensions: 1895
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1895
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)