Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30477
         (753 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    30   0.067
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              25   3.3  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           24   4.4  
DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.        24   5.8  
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    24   5.8  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   7.7  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 30.3 bits (65), Expect = 0.067
 Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 12/115 (10%)
 Frame = +1

Query: 259 DFGGP--KNFGPRPNMMNKNFR-PRNDFNEVKN-DY---NTKNDGNQNDFG-GPKQFRPR 414
           D  GP   N+GP  N   +  + P     E+K  D    NT N GN N+ G G  Q +P 
Sbjct: 29  DLYGPLHANYGPGSNNGQEGLKGPGGARGELKQFDLPLGNTGNSGNNNNNGVGNHQQQP- 87

Query: 415 NNFNNG----NQPPKKNNFNGDKSPGNMQYGNKNDLAVLNNKIITRIMGLKHTTT 567
           +  N G    N     NN NG  +   +  G+ N  A+ N+ ++        TTT
Sbjct: 88  SPVNEGTGKTNNNNNNNNNNGSNTGATVNSGSSN-AALSNSSVLNGSNSGSATTT 141


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 16/67 (23%), Positives = 26/67 (38%)
 Frame = +3

Query: 519 KQQNYNKNYGPKTYNNQNCYGNEQPEFIPRQSYSPNSVQHSLNDRKLQSKKAKHPGDSLL 698
           +QQ     Y P     Q     +Q +  P++     S Q      + Q +K K P   L+
Sbjct: 331 QQQQQTGRYQPPQMRQQ--LQQQQQQRQPQRYVVAGSSQQQQQQHQQQQQKRKRPKPELI 388

Query: 699 KANVGSN 719
           + + G N
Sbjct: 389 EISPGQN 395


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 18/66 (27%), Positives = 25/66 (37%)
 Frame = +1

Query: 250 RSPDFGGPKNFGPRPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNN 429
           RSP  GGP     R  M      P N+F    +   T+  G     GGP     ++ F +
Sbjct: 100 RSPR-GGPGGSNYRRYMPRATGAPVNNFQYCYSTAGTQMGGPGTQMGGPGTVESQDLFGD 158

Query: 430 GNQPPK 447
               P+
Sbjct: 159 MMPQPQ 164


>DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.
          Length = 482

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -2

Query: 596 FRLLIPIAILVVVC 555
           FRLL+P+ +L+ VC
Sbjct: 14  FRLLLPLGLLLCVC 27


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = +3

Query: 603 PRQSYSPNSVQHSLNDRKL---QSKKAKHPGDSLLKANVGSN 719
           P+ S SP      L DR     ++++  HP  +LL  NVG N
Sbjct: 90  PKFSNSPTCGAQQLADRIYFGEETERGAHPWAALLFYNVGRN 131


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +3

Query: 561 NNQNCYGNEQPEFIPRQSYSPNSVQHS-LNDRKL 659
           NN N  GN     I   + + NS+ H  L D++L
Sbjct: 202 NNNNSSGNNNNNTISSNNNNNNSLHHGPLRDKEL 235


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 794,776
Number of Sequences: 2352
Number of extensions: 16780
Number of successful extensions: 70
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)