Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30477
(753 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 36 0.031
AF077544-1|AAK39241.2| 231|Caenorhabditis elegans Hypothetical ... 34 0.094
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 34 0.12
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 34 0.12
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 33 0.16
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 32 0.38
AC025726-4|AAK73922.1| 198|Caenorhabditis elegans Prion-like-(q... 32 0.38
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 31 0.66
U13876-13|AAA21172.3| 370|Caenorhabditis elegans Prion-like-(q/... 31 0.66
Z54235-6|CAA90975.3| 199|Caenorhabditis elegans Hypothetical pr... 31 1.2
U80454-4|AAB37876.3| 896|Caenorhabditis elegans Prion-like-(q/n... 31 1.2
AF003151-2|AAK18919.3| 277|Caenorhabditis elegans Prion-like-(q... 30 1.5
AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory cy... 29 2.7
AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in ... 29 2.7
Z69791-3|CAA93662.1| 924|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z69791-2|CAA93661.2| 919|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z69791-1|CAA93660.1| 945|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z74043-3|CAA98546.1| 125|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z74043-2|CAA98545.1| 243|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z14092-8|CAA78471.1| 208|Caenorhabditis elegans Hypothetical pr... 29 4.7
X13689-1|CAA31979.1| 208|Caenorhabditis elegans protein ( Caeno... 29 4.7
AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical ... 29 4.7
AC024813-3|AAK27881.1| 461|Caenorhabditis elegans Est (ever sho... 29 4.7
AC024813-2|ABE73329.1| 1027|Caenorhabditis elegans Est (ever sho... 29 4.7
AC024813-1|AAK27880.3| 1241|Caenorhabditis elegans Est (ever sho... 29 4.7
Z81527-12|CAB04277.2| 487|Caenorhabditis elegans Hypothetical p... 28 6.2
Z81037-4|CAB02747.2| 391|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z50797-7|CAD27609.1| 195|Caenorhabditis elegans Hypothetical pr... 28 6.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 6.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 6.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 6.2
AB086410-1|BAC44993.1| 195|Caenorhabditis elegans ABF-6 protein. 28 6.2
U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical p... 28 8.2
U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical p... 28 8.2
U39667-6|AAC69011.2| 640|Caenorhabditis elegans Disorganized mu... 28 8.2
AY095447-1|AAM23316.1| 640|Caenorhabditis elegans DIM-1(L) prot... 28 8.2
AC024214-10|AAF36080.1| 778|Caenorhabditis elegans Calpain fami... 28 8.2
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 35.9 bits (79), Expect = 0.031
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +1
Query: 367 DGNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSPGNMQYGNKNDLAVLNNK 528
+GN+N GG + RNN N + NNFNG+ + G+ Y N ND N+
Sbjct: 547 NGNRNGGGGNR----RNNNKNSSNSNNNNNFNGNGN-GDGSYNNNNDNCDFENR 595
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +1
Query: 268 GPKNFGPRPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNN-FNNGNQPP 444
GP P P + K + + N + N N+ N + G P PRNN NNGN P
Sbjct: 462 GPVPPIPEPKPLCKGLKFKKTANGGGGNNNNNNNNNNRNNGPP----PRNNGNNNGNGRP 517
Query: 445 KK 450
K
Sbjct: 518 MK 519
Score = 29.9 bits (64), Expect = 2.0
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Frame = +1
Query: 277 NFGPRPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNG----NQPP 444
N G N N N RN+ +N+ N N+GN P +N +G PP
Sbjct: 484 NGGGGNNNNNNNNNNRNNGPPPRNNGN--NNGNGRPMKPPSSSGSGSNRRSGPPPPPPPP 541
Query: 445 KKNNFNGDKS--PGNMQYGNKNDLAVLNN 525
+ + NG+++ GN + NKN NN
Sbjct: 542 RSSGANGNRNGGGGNRRNNNKNSSNSNNN 570
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/73 (30%), Positives = 31/73 (42%)
Frame = +1
Query: 286 PRPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNG 465
PR + N N R N N+ N+ N N N+F G ++NN N N G
Sbjct: 541 PRSSGANGN-RNGGGGNRRNNNKNSSNSNNNNNFNG--NGNGDGSYNNNNDNCDFENRCG 597
Query: 466 DKSPGNMQYGNKN 504
+ G + GN+N
Sbjct: 598 GQ--GGFENGNEN 608
>AF077544-1|AAK39241.2| 231|Caenorhabditis elegans Hypothetical
protein H22K11.3 protein.
Length = 231
Score = 34.3 bits (75), Expect = 0.094
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Frame = +1
Query: 277 NFGPRPNMMNKNFRPRNDFNEVKNDYNTKN----DGNQNDFGGP----KQFRPRNNFNNG 432
N GP PN NF N +N + +N N DG + G K P N + G
Sbjct: 131 NNGPHPN---GNFPNLNGYNNGPSSFNGGNTNVDDGIKGSVGAAVEPTKSPYPNNGYGYG 187
Query: 433 NQPPKKNNFNGDKSPGNMQYGN 498
N+ NNF ++ G YGN
Sbjct: 188 NRNGYGNNFGFNRMAGGNGYGN 209
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +1
Query: 307 KNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSP 477
+NF+ +D + +N Y N+G + G P N+N P N ++G + P
Sbjct: 34 QNFKATHDRLKRQNGYGMWNNGGEGGGAGEGGNFPMGNWNG----PNSNGYSGPQQP 86
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 33.9 bits (74), Expect = 0.12
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 277 NFGPRPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNG-NQPPKKN 453
NFG N N N NDFN N +N N+ N N+ P + P NN G P N
Sbjct: 191 NFGQNQNSNNNN----NDFNWNPN-FNWNNNQNNNNNNAPNKQAPMNNAGVGATTTPDFN 245
Query: 454 NFNGDKSPGNMQYGNKN 504
F + + + NKN
Sbjct: 246 PFQPNPNQQFVFNFNKN 262
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +1
Query: 310 NFRPRNDFNEVKN-DYNTKNDGNQNDFGGPKQFRPRNNFNNGN--QPPKKNNFN 462
+F+P N+F N N ++ N NDF F NN NN N P K+ N
Sbjct: 179 DFQPNNNFKYGNNFGQNQNSNNNNNDFNWNPNFNWNNNQNNNNNNAPNKQAPMN 232
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +1
Query: 304 NKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPPKK 450
N NF+ N+F + +N N ND N N P N NN N P K
Sbjct: 183 NNNFKYGNNFGQNQNSNNNNNDFNWN----PNFNWNNNQNNNNNNAPNK 227
Score = 31.1 bits (67), Expect = 0.88
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +1
Query: 325 NDFNEVKNDYNTKNDGNQNDFGGPKQ---FRPRNNFNNGNQPPKKNNFNGDKSPGN 483
N F+ + N +N+G FG P + F+P NNF GN + N N + + N
Sbjct: 152 NSFSGGNGNRNNQNNGFM-PFGQPSELPDFQPNNNFKYGNNFGQNQNSNNNNNDFN 206
Score = 27.9 bits (59), Expect = 8.2
Identities = 21/77 (27%), Positives = 31/77 (40%)
Frame = +1
Query: 295 NMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKS 474
N N F P +E+ + N N+FG + +N+ NN N NFN + +
Sbjct: 162 NNQNNGFMPFGQPSELPDFQPNNNFKYGNNFG-----QNQNSNNNNNDFNWNPNFNWNNN 216
Query: 475 PGNMQYGNKNDLAVLNN 525
N N A +NN
Sbjct: 217 QNNNNNNAPNKQAPMNN 233
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 33.9 bits (74), Expect = 0.12
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 277 NFGPRPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNG-NQPPKKN 453
NFG N N N NDFN N +N N+ N N+ P + P NN G P N
Sbjct: 191 NFGQNQNSNNNN----NDFNWNPN-FNWNNNQNNNNNNAPNKQAPMNNAGVGATTTPDFN 245
Query: 454 NFNGDKSPGNMQYGNKN 504
F + + + NKN
Sbjct: 246 PFQPNPNQQFVFNFNKN 262
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +1
Query: 310 NFRPRNDFNEVKN-DYNTKNDGNQNDFGGPKQFRPRNNFNNGN--QPPKKNNFN 462
+F+P N+F N N ++ N NDF F NN NN N P K+ N
Sbjct: 179 DFQPNNNFKYGNNFGQNQNSNNNNNDFNWNPNFNWNNNQNNNNNNAPNKQAPMN 232
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +1
Query: 304 NKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPPKK 450
N NF+ N+F + +N N ND N N P N NN N P K
Sbjct: 183 NNNFKYGNNFGQNQNSNNNNNDFNWN----PNFNWNNNQNNNNNNAPNK 227
Score = 31.1 bits (67), Expect = 0.88
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +1
Query: 325 NDFNEVKNDYNTKNDGNQNDFGGPKQ---FRPRNNFNNGNQPPKKNNFNGDKSPGN 483
N F+ + N +N+G FG P + F+P NNF GN + N N + + N
Sbjct: 152 NSFSGGNGNRNNQNNGFM-PFGQPSELPDFQPNNNFKYGNNFGQNQNSNNNNNDFN 206
Score = 27.9 bits (59), Expect = 8.2
Identities = 21/77 (27%), Positives = 31/77 (40%)
Frame = +1
Query: 295 NMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKS 474
N N F P +E+ + N N+FG + +N+ NN N NFN + +
Sbjct: 162 NNQNNGFMPFGQPSELPDFQPNNNFKYGNNFG-----QNQNSNNNNNDFNWNPNFNWNNN 216
Query: 475 PGNMQYGNKNDLAVLNN 525
N N A +NN
Sbjct: 217 QNNNNNNAPNKQAPMNN 233
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 33.5 bits (73), Expect = 0.16
Identities = 24/80 (30%), Positives = 27/80 (33%)
Frame = +1
Query: 268 GPKNFGPRPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPPK 447
G N G N N + N + N GN N G N NGN
Sbjct: 202 GSGNSGNSSNNNNSSGNSNYGSNNSGSGNGNSNSGNGNSGNG--NGNNAGNSGNGNGNSN 259
Query: 448 KNNFNGDKSPGNMQYGNKND 507
NN NG GN GN N+
Sbjct: 260 GNNGNGSNGNGNGNNGNGNN 279
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 32.3 bits (70), Expect = 0.38
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +1
Query: 271 PKNFGPRPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPR--NNFNNGNQPP 444
P F P M F PR N ++ G GGP+ F NNFNNG P
Sbjct: 755 PNGFNGAP--MRGGFVPRGGNNFSQSRGGMMGRGGHGGGGGPQNFYQNGPNNFNNG-PPE 811
Query: 445 KKNNFNGDK 471
++ F G++
Sbjct: 812 QQGQFRGNQ 820
>AC025726-4|AAK73922.1| 198|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 88
protein.
Length = 198
Score = 32.3 bits (70), Expect = 0.38
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 3/74 (4%)
Frame = +1
Query: 313 FRPRNDFNEVKNDYNTK-NDGNQNDFGGPKQFRPRNNFNNG--NQPPKKNNFNGDKSPGN 483
F F +N N N+ N FGG + G QPP N F P N
Sbjct: 64 FGGNGGFQPQQNQQNQGLNNNNGGFFGGNNNQNQQQPQQQGFQTQPPSNNFFGNQNDPTN 123
Query: 484 MQYGNKNDLAVLNN 525
+ N N+ V NN
Sbjct: 124 QGFQNNNNNNVNNN 137
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/90 (25%), Positives = 32/90 (35%), Gaps = 9/90 (10%)
Frame = +1
Query: 262 FGGPKNFGPRPNMMNKNFRPRNDF----NEVKNDYNTKNDGNQ-----NDFGGPKQFRPR 414
FGG F P+ N N+ N N +N + G Q N+F G +
Sbjct: 64 FGGNGGFQPQQNQQNQGLNNNNGGFFGGNNNQNQQQPQQQGFQTQPPSNNFFGNQNDPTN 123
Query: 415 NNFNNGNQPPKKNNFNGDKSPGNMQYGNKN 504
F N N NN N + + N+N
Sbjct: 124 QGFQNNNNNNVNNNNNQQQLQNQQGFQNQN 153
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 31.5 bits (68), Expect = 0.66
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = +1
Query: 265 GGPKNFGPRPNMMNKNFRPRNDFNEVKN---DYNTKNDGNQNDFGGPKQFRPRNNFNNGN 435
G +N G + N + N+FN N Y +NDG+ + G Q +N+N+G+
Sbjct: 149 GSSRNDGENDDWNNGDQNNNNNFNSKNNRMNKYGNRNDGDDYNGNGNNQ----DNWNSGS 204
Query: 436 QPPKKNNFNGDKSPG-NMQYG-NKND 507
N G G N G N+ND
Sbjct: 205 NSGGYNGGGGGSGGGSNWNNGDNEND 230
Score = 31.1 bits (67), Expect = 0.88
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 13/96 (13%)
Frame = +1
Query: 259 DFGGPKNFGPRPNMMNK--NFRPRNDFNEVKNDYNTKNDGNQND--------FGGPKQFR 408
D NF + N MNK N +D+N N+ + N G+ + GG +
Sbjct: 164 DQNNNNNFNSKNNRMNKYGNRNDGDDYNGNGNNQDNWNSGSNSGGYNGGGGGSGGGSNWN 223
Query: 409 PRNNFNNG---NQPPKKNNFNGDKSPGNMQYGNKND 507
+N N+G N +K+N N + + GN N ND
Sbjct: 224 NGDNENDGWNNNNNNRKSNNNNNNNYGNSWGTNDND 259
Score = 29.9 bits (64), Expect = 2.0
Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 5/88 (5%)
Frame = +1
Query: 259 DFGGPKNFGPRPNMMNKNFRPRNDFNEV-----KNDYNTKNDGNQNDFGGPKQFRPRNNF 423
++G N+G N N N ND + KN Y + N N+ND G NN
Sbjct: 388 NWGDNDNYGSS-NKWNGNGNQDNDNDNFGGGYSKNGYGSNN--NRNDGWGSSSSNNNNNN 444
Query: 424 NNGNQPPKKNNFNGDKSPGNMQYGNKND 507
NN N N G+ N ND
Sbjct: 445 NNNNNGGTGGYSNNGGGWGSNNNNNGND 472
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/82 (24%), Positives = 31/82 (37%)
Frame = +1
Query: 259 DFGGPKNFGPRPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQ 438
+FGG + + N+N + + N+ N N+G + NN NNGN
Sbjct: 413 NFGGGYSKNGYGSNNNRNDGWGSSSSNNNNNNNNNNNGGTGGYSNNGGGWGSNNNNNGND 472
Query: 439 PPKKNNFNGDKSPGNMQYGNKN 504
+ NG G + N N
Sbjct: 473 GNNWESNNGGNGGGGDNWNNGN 494
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 31.5 bits (68), Expect = 0.66
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = +1
Query: 265 GGPKNFGPRPNMMNKNFRPRNDFNEVKN---DYNTKNDGNQNDFGGPKQFRPRNNFNNGN 435
G +N G + N + N+FN N Y +NDG+ + G Q +N+N+G+
Sbjct: 149 GSSRNDGENDDWNNGDQNNNNNFNSKNNRMNKYGNRNDGDDYNGNGNNQ----DNWNSGS 204
Query: 436 QPPKKNNFNGDKSPG-NMQYG-NKND 507
N G G N G N+ND
Sbjct: 205 NSGGYNGGGGGSGGGSNWNNGDNEND 230
Score = 31.1 bits (67), Expect = 0.88
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 13/96 (13%)
Frame = +1
Query: 259 DFGGPKNFGPRPNMMNK--NFRPRNDFNEVKNDYNTKNDGNQND--------FGGPKQFR 408
D NF + N MNK N +D+N N+ + N G+ + GG +
Sbjct: 164 DQNNNNNFNSKNNRMNKYGNRNDGDDYNGNGNNQDNWNSGSNSGGYNGGGGGSGGGSNWN 223
Query: 409 PRNNFNNG---NQPPKKNNFNGDKSPGNMQYGNKND 507
+N N+G N +K+N N + + GN N ND
Sbjct: 224 NGDNENDGWNNNNNNRKSNNNNNNNYGNSWGTNDND 259
Score = 29.9 bits (64), Expect = 2.0
Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 5/88 (5%)
Frame = +1
Query: 259 DFGGPKNFGPRPNMMNKNFRPRNDFNEV-----KNDYNTKNDGNQNDFGGPKQFRPRNNF 423
++G N+G N N N ND + KN Y + N N+ND G NN
Sbjct: 388 NWGDNDNYGSS-NKWNGNGNQDNDNDNFGGGYSKNGYGSNN--NRNDGWGSSSSNNNNNN 444
Query: 424 NNGNQPPKKNNFNGDKSPGNMQYGNKND 507
NN N N G+ N ND
Sbjct: 445 NNNNNGGTGGYSNNGGGWGSNNNNNGND 472
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/82 (24%), Positives = 31/82 (37%)
Frame = +1
Query: 259 DFGGPKNFGPRPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQ 438
+FGG + + N+N + + N+ N N+G + NN NNGN
Sbjct: 413 NFGGGYSKNGYGSNNNRNDGWGSSSSNNNNNNNNNNNGGTGGYSNNGGGWGSNNNNNGND 472
Query: 439 PPKKNNFNGDKSPGNMQYGNKN 504
+ NG G + N N
Sbjct: 473 GNNWESNNGGNGGGGDNWNNGN 494
>U13876-13|AAA21172.3| 370|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 46
protein.
Length = 370
Score = 31.5 bits (68), Expect = 0.66
Identities = 20/76 (26%), Positives = 31/76 (40%)
Frame = +1
Query: 262 FGGPKNFGPRPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQP 441
+G P+ N N +N+ + +N N+ N+ +QF NN NN N
Sbjct: 29 YGYPQQQQQGNQYYNNNNNNNGYYNQQQQQFNGYNNNYNNNNNQQQQFYNNNN-NNYNNN 87
Query: 442 PKKNNFNGDKSPGNMQ 489
NN N ++ P Q
Sbjct: 88 NYNNNNNYNQQPQGAQ 103
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 YNTKNDGNQNDFGGPKQFRP-RNNFNNGNQPPKKNNFNGDKSPGNMQYGNKND 507
YN N+ N +QF NN+NN N ++ N + + N Y N N+
Sbjct: 42 YNNNNNNNGYYNQQQQQFNGYNNNYNNNNNQQQQFYNNNNNNYNNNNYNNNNN 94
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 528 NYNKNYGPKTYNNQNCYGNEQPE 596
N N NY YNN N Y N+QP+
Sbjct: 79 NNNNNYNNNNYNNNNNY-NQQPQ 100
>Z54235-6|CAA90975.3| 199|Caenorhabditis elegans Hypothetical
protein C09G9.5 protein.
Length = 199
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = -2
Query: 614 RLPRNKFRLLIPIAILVVVCFRPIILVIILLFRTAKSFLLPYCI 483
+ P+N ++ +IL+ + ++ I+ +FR FLLPY +
Sbjct: 79 KTPKNYVEFIVICSILITMILTFSLMFIMAVFRARPKFLLPYMV 122
>U80454-4|AAB37876.3| 896|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 66
protein.
Length = 896
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 PDFGGPKNFGPRPNMMN-KNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNG 432
P+ +N PN+ N N + + KND N +N N + + N NG
Sbjct: 604 PNAHNAQNVQNAPNVQNASNVQNSQNGQNDKNDPNAQNSQNGQNRQNDPNVQNSQNAQNG 663
Query: 433 NQPPKKNNFNGDKSPGNMQYGNKND 507
N D + N Q G +ND
Sbjct: 664 QYAQNSKNGQNDPNAKNAQNG-QND 687
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Frame = +1
Query: 322 RNDFN--EVKNDYNTKNDGN-QNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSPGNMQY 492
+ND N +N N +ND N QN +N+ N N P KN NG P
Sbjct: 634 KNDPNAQNSQNGQNRQNDPNVQNSQNAQNGQYAQNSKNGQNDPNAKNAQNGQNDPNAPNA 693
Query: 493 GNKNDLAVLNN 525
N D A N
Sbjct: 694 QNSKDDANAQN 704
>AF003151-2|AAK18919.3| 277|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 24
protein.
Length = 277
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +1
Query: 364 NDGNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSPGNMQYGNKND 507
N GN N GG ++ NGN NN NG + N +GN ND
Sbjct: 116 NSGNWNS-GGNNNGASGGSWGNGNANNNNNNNNGGSN--NNGWGNNND 160
>AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory
cytoplasmic polyA polymeraseprotein.
Length = 1113
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 513 GPKQQNYNKNYGPKTYNNQ-NCYGNEQPEFIPRQSYSPNSVQHSLNDRKLQSK 668
G K+Q YN G ++YN++ N + E+ Q P Q + N +LQ K
Sbjct: 73 GNKRQTYNNQRGGRSYNHRGNSNYQQNGEYSGNQGCVPKYHQRNQNYPQLQPK 125
>AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform a protein.
Length = 1113
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 513 GPKQQNYNKNYGPKTYNNQ-NCYGNEQPEFIPRQSYSPNSVQHSLNDRKLQSK 668
G K+Q YN G ++YN++ N + E+ Q P Q + N +LQ K
Sbjct: 73 GNKRQTYNNQRGGRSYNHRGNSNYQQNGEYSGNQGCVPKYHQRNQNYPQLQPK 125
>Z69791-3|CAA93662.1| 924|Caenorhabditis elegans Hypothetical
protein F39D8.1c protein.
Length = 924
Score = 29.1 bits (62), Expect = 3.5
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Frame = +1
Query: 265 GGPKNFGPRPNMMNKNFRPR-NDFNEVKNDYNTKNDGNQNDFGGPKQFRPRN-NFNNGNQ 438
GG N G N+N D N+ N Y +N G QF+ +N N N G
Sbjct: 151 GGQPNVGGNVGGQNQNVGGVVGDQNQ--NQYQNQNINAAGVVGNQNQFQNQNQNINAGGY 208
Query: 439 PPKKNNFNGDKSPGNMQYGNKN 504
+N N + P QY N+N
Sbjct: 209 VGDQNQ-NQFQDPNQGQYQNQN 229
>Z69791-2|CAA93661.2| 919|Caenorhabditis elegans Hypothetical
protein F39D8.1b protein.
Length = 919
Score = 29.1 bits (62), Expect = 3.5
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Frame = +1
Query: 265 GGPKNFGPRPNMMNKNFRPR-NDFNEVKNDYNTKNDGNQNDFGGPKQFRPRN-NFNNGNQ 438
GG N G N+N D N+ N Y +N G QF+ +N N N G
Sbjct: 146 GGQPNVGGNVGGQNQNVGGVVGDQNQ--NQYQNQNINAAGVVGNQNQFQNQNQNINAGGY 203
Query: 439 PPKKNNFNGDKSPGNMQYGNKN 504
+N N + P QY N+N
Sbjct: 204 VGDQNQ-NQFQDPNQGQYQNQN 224
>Z69791-1|CAA93660.1| 945|Caenorhabditis elegans Hypothetical
protein F39D8.1a protein.
Length = 945
Score = 29.1 bits (62), Expect = 3.5
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Frame = +1
Query: 265 GGPKNFGPRPNMMNKNFRPR-NDFNEVKNDYNTKNDGNQNDFGGPKQFRPRN-NFNNGNQ 438
GG N G N+N D N+ N Y +N G QF+ +N N N G
Sbjct: 169 GGQPNVGGNVGGQNQNVGGVVGDQNQ--NQYQNQNINAAGVVGNQNQFQNQNQNINAGGY 226
Query: 439 PPKKNNFNGDKSPGNMQYGNKN 504
+N N + P QY N+N
Sbjct: 227 VGDQNQ-NQFQDPNQGQYQNQN 247
>Z74043-3|CAA98546.1| 125|Caenorhabditis elegans Hypothetical
protein T19B10.4b protein.
Length = 125
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 289 RPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPP 444
+P N N + N+ N K N N N+N GG RN +QPP
Sbjct: 18 QPTTNNNNKKAGNNSNNQKKGNNQNNKNNKNQNGG-----NRNQNRQHHQPP 64
>Z74043-2|CAA98545.1| 243|Caenorhabditis elegans Hypothetical
protein T19B10.4a protein.
Length = 243
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 289 RPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPP 444
+P N N + N+ N K N N N+N GG RN +QPP
Sbjct: 18 QPTTNNNNKKAGNNSNNQKKGNNQNNKNNKNQNGG-----NRNQNRQHHQPP 64
Score = 28.3 bits (60), Expect = 6.2
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 265 GGPKNFGPRPNMMNKNFRPRNDFN-EVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQP 441
GGP GP PN N NF FN + + + + KN+GN+N G P + NN Q
Sbjct: 81 GGPGFMGP-PNG-NMNF-----FNGQNRRNGSGKNNGNRN--GAPPSGYNGPSANNVGQG 131
Query: 442 PKKNNFNG 465
NN NG
Sbjct: 132 AIGNNMNG 139
>Z14092-8|CAA78471.1| 208|Caenorhabditis elegans Hypothetical
protein R107.7 protein.
Length = 208
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 155 IKMQYNGFHNQHPIFRPQPDRNEQFGKIPYIKGLL 259
I M Y G + H + RN + GK PYIK +L
Sbjct: 87 IDMFYEGLRDLHTKYTTMIYRNYEDGKAPYIKDVL 121
>X13689-1|CAA31979.1| 208|Caenorhabditis elegans protein (
Caenorhabditis elegansgst-1 mRNA for glutathione
S-transferase P subunit. ).
Length = 208
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 155 IKMQYNGFHNQHPIFRPQPDRNEQFGKIPYIKGLL 259
I M Y G + H + RN + GK PYIK +L
Sbjct: 87 IDMFYEGLRDLHTKYTTMIYRNYEDGKAPYIKDVL 121
>AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical
protein Y39C12A.8 protein.
Length = 365
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 322 RNDFNE-VKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSPGNMQYGN 498
RN+ N K D+N+KN + + K+ P +N NN N K ++ +KS + G+
Sbjct: 132 RNEQNSSFKQDHNSKNHQSNHQKTKNKKSNPYSNQNNFNNTRK--DYREEKSGFSWNTGS 189
Query: 499 KND 507
+D
Sbjct: 190 ADD 192
>AC024813-3|AAK27881.1| 461|Caenorhabditis elegans Est (ever
shorter telomeres) homologprotein 1, isoform b protein.
Length = 461
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/73 (23%), Positives = 31/73 (42%)
Frame = +1
Query: 265 GGPKNFGPRPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPP 444
GG F + P N +N ++ Y+T+ G ++ G + RNN NQ
Sbjct: 99 GGRNRFEKGYRQQQRTDGPSN-YNSTQSLYDTRQHGGYMEYQGNHRSNHRNNGRYSNQQH 157
Query: 445 KKNNFNGDKSPGN 483
+++ ++ GN
Sbjct: 158 QQHRQPFERPGGN 170
>AC024813-2|ABE73329.1| 1027|Caenorhabditis elegans Est (ever
shorter telomeres) homologprotein 1, isoform c protein.
Length = 1027
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/73 (23%), Positives = 31/73 (42%)
Frame = +1
Query: 265 GGPKNFGPRPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPP 444
GG F + P N +N ++ Y+T+ G ++ G + RNN NQ
Sbjct: 99 GGRNRFEKGYRQQQRTDGPSN-YNSTQSLYDTRQHGGYMEYQGNHRSNHRNNGRYSNQQH 157
Query: 445 KKNNFNGDKSPGN 483
+++ ++ GN
Sbjct: 158 QQHRQPFERPGGN 170
>AC024813-1|AAK27880.3| 1241|Caenorhabditis elegans Est (ever
shorter telomeres) homologprotein 1, isoform a protein.
Length = 1241
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/73 (23%), Positives = 31/73 (42%)
Frame = +1
Query: 265 GGPKNFGPRPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPP 444
GG F + P N +N ++ Y+T+ G ++ G + RNN NQ
Sbjct: 99 GGRNRFEKGYRQQQRTDGPSN-YNSTQSLYDTRQHGGYMEYQGNHRSNHRNNGRYSNQQH 157
Query: 445 KKNNFNGDKSPGN 483
+++ ++ GN
Sbjct: 158 QQHRQPFERPGGN 170
>Z81527-12|CAB04277.2| 487|Caenorhabditis elegans Hypothetical
protein F35E12.10 protein.
Length = 487
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
Frame = +1
Query: 262 FGGPKNFGPRPNMMNKNFRPRNDFNEVKND---YNTKNDGNQNDFGGPKQFRPRNNFNNG 432
+ G K + P++ N N P N + +ND + K D + F Q + G
Sbjct: 362 YDGRKGYIISPSLWNPNANPNNLNYDFRNDTQLFTYKVDFERMKFSSNDQMTLQIGSGTG 421
Query: 433 NQPPKKNNFNGDKSPGNMQYGNKNDLAV 516
N P N + DKS N N + V
Sbjct: 422 N-PAINNQYPRDKSSTGSVSSNGNYMKV 448
>Z81037-4|CAB02747.2| 391|Caenorhabditis elegans Hypothetical
protein C17E4.6 protein.
Length = 391
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 295 NMMNKNFRP--RNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPPK 447
N ++K F+ +D +EV +D++ + ++ GG + RPR N+P +
Sbjct: 130 NEVDKEFKSPVHSDDDEVDSDFDKPEEEDEPASGGEEDGRPRRKKRKFNEPKR 182
>Z50797-7|CAD27609.1| 195|Caenorhabditis elegans Hypothetical
protein T22H6.7 protein.
Length = 195
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +1
Query: 358 TKNDGNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSPGNMQYGNKN 504
T N GN N + +N+ N N + G +PG YGN N
Sbjct: 101 TPNYGNNNGYNNGYNNGNNMRYNDNNGYNTNNGYRGQPTPG---YGNSN 146
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
Frame = +1
Query: 364 NDGNQNDFGGPKQFRPRNNFNN----GNQPPKKNNFNGDKSPGNMQYGNKN 504
N GNQ FGG +N NN GNQ + F G + Q +N
Sbjct: 173 NQGNQGGFGGQNGQNGQNTGNNGGFGGNQGVTASGFGGQQQGFGQQQQTQN 223
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
Frame = +1
Query: 364 NDGNQNDFGGPKQFRPRNNFNN----GNQPPKKNNFNGDKSPGNMQYGNKN 504
N GNQ FGG +N NN GNQ + F G + Q +N
Sbjct: 194 NQGNQGGFGGQNGQNGQNTGNNGGFGGNQGVTASGFGGQQQGFGQQQQTQN 244
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
Frame = +1
Query: 364 NDGNQNDFGGPKQFRPRNNFNN----GNQPPKKNNFNGDKSPGNMQYGNKN 504
N GNQ FGG +N NN GNQ + F G + Q +N
Sbjct: 179 NQGNQGGFGGQNGQNGQNTGNNGGFGGNQGVTASGFGGQQQGFGQQQQTQN 229
>AB086410-1|BAC44993.1| 195|Caenorhabditis elegans ABF-6 protein.
Length = 195
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +1
Query: 358 TKNDGNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSPGNMQYGNKN 504
T N GN N + +N+ N N + G +PG YGN N
Sbjct: 101 TPNYGNNNGYNNGYNNGNNMRYNDNNGYNTNNGYRGQPTPG---YGNSN 146
>U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical
protein F29B9.2b protein.
Length = 897
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +1
Query: 265 GGPKNFGPRPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPP 444
G PK+ PR N P+ + + + N N+ + PK +N +NG++PP
Sbjct: 93 GAPKD--PRRKQHNPKSEPKIEPHVTDSSDNQAAMSNKMEAEAPKMESNQNYVSNGSEPP 150
>U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical
protein F29B9.2a protein.
Length = 910
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +1
Query: 265 GGPKNFGPRPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPP 444
G PK+ PR N P+ + + + N N+ + PK +N +NG++PP
Sbjct: 106 GAPKD--PRRKQHNPKSEPKIEPHVTDSSDNQAAMSNKMEAEAPKMESNQNYVSNGSEPP 163
>U39667-6|AAC69011.2| 640|Caenorhabditis elegans Disorganized
muscle protein 1,isoform a protein.
Length = 640
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 549 PKTYNNQN-CYGNEQPEFIPRQSYSPNSVQHSLNDRKLQSKKAKHPGDSLLKANVGSN-* 722
P++YNNQN C ++ FI + + + ++ L+ K + L A GSN
Sbjct: 57 PRSYNNQNLCTRSKPTTFISQNQQKGMTEKPKHSEYFLRLMKTRQEMQKKLTAKNGSNKS 116
Query: 723 IRTYFRK 743
++ Y RK
Sbjct: 117 VQQYLRK 123
>AY095447-1|AAM23316.1| 640|Caenorhabditis elegans DIM-1(L)
protein.
Length = 640
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 549 PKTYNNQN-CYGNEQPEFIPRQSYSPNSVQHSLNDRKLQSKKAKHPGDSLLKANVGSN-* 722
P++YNNQN C ++ FI + + + ++ L+ K + L A GSN
Sbjct: 57 PRSYNNQNLCTRSKPTTFISQNQQKGMTEKPKHSEYFLRLMKTRQEMQKKLTAKNGSNKS 116
Query: 723 IRTYFRK 743
++ Y RK
Sbjct: 117 VQQYLRK 123
>AC024214-10|AAF36080.1| 778|Caenorhabditis elegans Calpain family
protein 7 protein.
Length = 778
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +3
Query: 522 QQNY-NKNYGPKTYNNQNCYGNEQ 590
+QNY N++YG + Y NQ YGN+Q
Sbjct: 50 EQNYGNQDYG-QGYGNQQDYGNQQ 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,545,685
Number of Sequences: 27780
Number of extensions: 391550
Number of successful extensions: 1440
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1399
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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