Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30473
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    23   2.4  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   3.2  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.6  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   5.6  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   9.7  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   9.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   9.7  

>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 532 SLGFLVFCFSAEPFLFGIVRY 470
           +LGFL+      PF+ G V++
Sbjct: 28  ALGFLIIAGCVSPFVIGYVKH 48


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/31 (22%), Positives = 21/31 (67%)
 Frame = +2

Query: 383 RSEGITELLDCMTADRVNIMILSNKHSKPIA 475
           + +G   +++  T+DRV+  ++++  ++P+A
Sbjct: 218 KHDGRGRIVERFTSDRVHAALVTSPRARPLA 248


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 66  NAQTFFLR*DKRLPFPSCP 10
           N     +R DKRL  P CP
Sbjct: 219 NHSKVHIREDKRLTCPKCP 237


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/50 (18%), Positives = 24/50 (48%)
 Frame = -1

Query: 546 TFEPFLWDFLSSVSVPNHFSLESYAMGLECLFDNIMMLTLSAVMQSNSSV 397
           T+E F+W  +  V+    +++E +    + +   ++   L  ++Q   +V
Sbjct: 126 TYEAFVWTRIMGVAYYEQYAVEFFQFYAQFIVYFLIYAVLEMLLQKYKTV 175


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = -3

Query: 202 YVREYSFEYL 173
           +V+EY+FEY+
Sbjct: 129 FVKEYAFEYI 138


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = -3

Query: 202 YVREYSFEYL 173
           +V+EY+FEY+
Sbjct: 129 FVKEYAFEYI 138


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = -3

Query: 202 YVREYSFEYL 173
           +V+EY+FEY+
Sbjct: 449 FVKEYAFEYI 458


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,883
Number of Sequences: 336
Number of extensions: 3702
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)