Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30473
(702 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55372-1|AAA98002.2| 816|Caenorhabditis elegans Hypothetical pr... 71 6e-13
AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical ... 67 1e-11
AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical ... 67 1e-11
AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical ... 67 1e-11
AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical ... 67 1e-11
U55372-2|AAA98001.1| 980|Caenorhabditis elegans Hypothetical pr... 64 9e-11
Z99283-7|CAB16537.2| 985|Caenorhabditis elegans Hypothetical pr... 62 5e-10
Z92782-14|CAI46605.1| 985|Caenorhabditis elegans Hypothetical p... 62 5e-10
U23180-3|AAC46729.2| 856|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U88167-7|AAB42229.1| 378|Caenorhabditis elegans Hypothetical pr... 34 0.086
Z82073-7|CAB04922.2| 327|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical pr... 28 5.6
AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein. 28 5.6
AF022973-11|AAK84524.3| 560|Caenorhabditis elegans Hypothetical... 28 7.4
AC006733-4|AAF60486.1| 319|Caenorhabditis elegans Dehydrogenase... 27 9.8
>U55372-1|AAA98002.2| 816|Caenorhabditis elegans Hypothetical
protein C02G6.2 protein.
Length = 816
Score = 71.3 bits (167), Expect = 6e-13
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 3/171 (1%)
Frame = +2
Query: 116 YSLFSTQVVLTKDGLDHVDEVLEAIFSYINMLKKIGPSERIYNETRH-RRDEFSLRRGVP 292
+ F+ + L+ +GL+HVDE+++ +F+YI ML+ GP + I+ E EF + P
Sbjct: 333 FGYFNVTMDLSTEGLEHVDEIIQLMFNYIGMLQSAGPQQWIHEELAELSAIEFRFKDREP 392
Query: 293 ASGLCGDSGREHAVLPARTLHNRRQTLLQIRSEGITELLDCMTADRVNIMILSNKHSKPI 472
+ R +P + + R L + E I ELL +T + + ++S K K
Sbjct: 393 LTKNAIKVARNLQYIPFEHILSSRYLLTKYNPERIKELLSTLTPSNMLVRVVSKKF-KEQ 451
Query: 473 AYDSKEKWFGTETE--DKKSQRNGSNVG*TPNRGPQFYLPEKNIYITTNFD 619
++ E +GTE + D ++ +LPEKN YI T FD
Sbjct: 452 EGNTNEPVYGTEMKVTDISPEKMKKYENALKTSHHALHLPEKNEYIVTKFD 502
>AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical
protein F44E7.4d protein.
Length = 984
Score = 67.3 bits (157), Expect = 1e-11
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 5/211 (2%)
Frame = +2
Query: 2 YLLGHEXXXXXXXXXXXXVWALGIYTGNSESGIDYTSMYSLFSTQVVLTKDGLDHVDEVL 181
+L+GHE W + + + + +++ + L+ +GL+HVDE++
Sbjct: 358 HLIGHEGPGSLLSELKRLGWVSSLQSDSHTQAAGF----GVYNVTMDLSTEGLEHVDEII 413
Query: 182 EAIFSYINMLKKIGPSERIYNETRH-RRDEFSLRRGVPASGLCGDSGREHAVLPARTLHN 358
+ +F+YI ML+ GP + +++E +F + + + +P + +
Sbjct: 414 QLMFNYIGMLQSAGPKQWVHDELAELSAVKFRFKDKEQPMTMAINVAASLQYIPFEHILS 473
Query: 359 RRQTLLQIRSEGITELLDCMTADRVNIMILSNKHSKPIAYDSKEKWFGTETE----DKKS 526
R L + E I ELL ++ + + ++S K K ++ E +GTE + ++
Sbjct: 474 SRYLLTKYEPERIKELLSMLSPANMQVRVVSQKF-KGQEGNTNEPVYGTEMKVTDISPET 532
Query: 527 QRNGSNVG*TPNRGPQFYLPEKNIYITTNFD 619
+ N T + +LPEKN YI TNFD
Sbjct: 533 MKKYENALKTSHHA--LHLPEKNEYIATNFD 561
>AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical
protein F44E7.4c protein.
Length = 1008
Score = 67.3 bits (157), Expect = 1e-11
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 5/211 (2%)
Frame = +2
Query: 2 YLLGHEXXXXXXXXXXXXVWALGIYTGNSESGIDYTSMYSLFSTQVVLTKDGLDHVDEVL 181
+L+GHE W + + + + +++ + L+ +GL+HVDE++
Sbjct: 299 HLIGHEGPGSLLSELKRLGWVSSLQSDSHTQAAGF----GVYNVTMDLSTEGLEHVDEII 354
Query: 182 EAIFSYINMLKKIGPSERIYNETRH-RRDEFSLRRGVPASGLCGDSGREHAVLPARTLHN 358
+ +F+YI ML+ GP + +++E +F + + + +P + +
Sbjct: 355 QLMFNYIGMLQSAGPKQWVHDELAELSAVKFRFKDKEQPMTMAINVAASLQYIPFEHILS 414
Query: 359 RRQTLLQIRSEGITELLDCMTADRVNIMILSNKHSKPIAYDSKEKWFGTETE----DKKS 526
R L + E I ELL ++ + + ++S K K ++ E +GTE + ++
Sbjct: 415 SRYLLTKYEPERIKELLSMLSPANMQVRVVSQKF-KGQEGNTNEPVYGTEMKVTDISPET 473
Query: 527 QRNGSNVG*TPNRGPQFYLPEKNIYITTNFD 619
+ N T + +LPEKN YI TNFD
Sbjct: 474 MKKYENALKTSHHA--LHLPEKNEYIATNFD 502
>AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical
protein F44E7.4a protein.
Length = 1067
Score = 67.3 bits (157), Expect = 1e-11
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 5/211 (2%)
Frame = +2
Query: 2 YLLGHEXXXXXXXXXXXXVWALGIYTGNSESGIDYTSMYSLFSTQVVLTKDGLDHVDEVL 181
+L+GHE W + + + + +++ + L+ +GL+HVDE++
Sbjct: 358 HLIGHEGPGSLLSELKRLGWVSSLQSDSHTQAAGF----GVYNVTMDLSTEGLEHVDEII 413
Query: 182 EAIFSYINMLKKIGPSERIYNETRH-RRDEFSLRRGVPASGLCGDSGREHAVLPARTLHN 358
+ +F+YI ML+ GP + +++E +F + + + +P + +
Sbjct: 414 QLMFNYIGMLQSAGPKQWVHDELAELSAVKFRFKDKEQPMTMAINVAASLQYIPFEHILS 473
Query: 359 RRQTLLQIRSEGITELLDCMTADRVNIMILSNKHSKPIAYDSKEKWFGTETE----DKKS 526
R L + E I ELL ++ + + ++S K K ++ E +GTE + ++
Sbjct: 474 SRYLLTKYEPERIKELLSMLSPANMQVRVVSQKF-KGQEGNTNEPVYGTEMKVTDISPET 532
Query: 527 QRNGSNVG*TPNRGPQFYLPEKNIYITTNFD 619
+ N T + +LPEKN YI TNFD
Sbjct: 533 MKKYENALKTSHHA--LHLPEKNEYIATNFD 561
>AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical
protein F44E7.4b protein.
Length = 1051
Score = 67.3 bits (157), Expect = 1e-11
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 5/211 (2%)
Frame = +2
Query: 2 YLLGHEXXXXXXXXXXXXVWALGIYTGNSESGIDYTSMYSLFSTQVVLTKDGLDHVDEVL 181
+L+GHE W + + + + +++ + L+ +GL+HVDE++
Sbjct: 358 HLIGHEGPGSLLSELKRLGWVSSLQSDSHTQAAGF----GVYNVTMDLSTEGLEHVDEII 413
Query: 182 EAIFSYINMLKKIGPSERIYNETRH-RRDEFSLRRGVPASGLCGDSGREHAVLPARTLHN 358
+ +F+YI ML+ GP + +++E +F + + + +P + +
Sbjct: 414 QLMFNYIGMLQSAGPKQWVHDELAELSAVKFRFKDKEQPMTMAINVAASLQYIPFEHILS 473
Query: 359 RRQTLLQIRSEGITELLDCMTADRVNIMILSNKHSKPIAYDSKEKWFGTETE----DKKS 526
R L + E I ELL ++ + + ++S K K ++ E +GTE + ++
Sbjct: 474 SRYLLTKYEPERIKELLSMLSPANMQVRVVSQKF-KGQEGNTNEPVYGTEMKVTDISPET 532
Query: 527 QRNGSNVG*TPNRGPQFYLPEKNIYITTNFD 619
+ N T + +LPEKN YI TNFD
Sbjct: 533 MKKYENALKTSHHA--LHLPEKNEYIATNFD 561
>U55372-2|AAA98001.1| 980|Caenorhabditis elegans Hypothetical
protein C02G6.1 protein.
Length = 980
Score = 64.1 bits (149), Expect = 9e-11
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 3/170 (1%)
Frame = +2
Query: 116 YSLFSTQVVLTKDGLDHVDEVLEAIFSYINMLKKIGPSERIYNETRHRRD-EFSLRRGVP 292
+ + + + L+ GL++VDE+++ + +YI MLK GP + I++E D +F +
Sbjct: 306 FGILNVTMDLSTGGLENVDEIIQLMLNYIGMLKSFGPQQWIHDELADLSDVKFRFKDKEQ 365
Query: 293 ASGLCGDSGREHAVLPARTLHNRRQTLLQIRSEGITELLDCMTADRVNIMILSNKHSKPI 472
+ + +P + + R L + E I ELL +T + + ++S K K
Sbjct: 366 PMKMAINIAASLQYIPIEHILSSRYLLTKYEPERIKELLSTLTPSNMLVRVVSQKF-KEQ 424
Query: 473 AYDSKEKWFGTETE--DKKSQRNGSNVG*TPNRGPQFYLPEKNIYITTNF 616
++ E +GTE + D ++ +LPEKN YI TNF
Sbjct: 425 EGNTNEPVYGTEMKVTDISPEKMKKYENALKTSHHALHLPEKNEYIATNF 474
>Z99283-7|CAB16537.2| 985|Caenorhabditis elegans Hypothetical
protein Y70C5C.1 protein.
Length = 985
Score = 61.7 bits (143), Expect = 5e-10
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 3/209 (1%)
Frame = +2
Query: 2 YLLGHEXXXXXXXXXXXXVWALGIYTGNSESGIDYTSMYSLFSTQVVLTKDGLDHVDEVL 181
+L+GHE W + + +G + + + F + L+ +GL+HVDE++
Sbjct: 299 HLIGHEGHGSLLSELKRLGWVVSLQSGY----VVQAAGFGNFQVGIELSTEGLEHVDEII 354
Query: 182 EAIFSYINMLKKIGPSERIYNETRH-RRDEFSLRRGVPASGLCGDSGREHAVLPARTLHN 358
+ +F+YI M++ GP + ++ E R F + + +P + + +
Sbjct: 355 QLMFNYIGMMQSSGPKQWVHEELAELRAVTFRFKDKEQPMAMASCVAARLQRIPFKHVLS 414
Query: 359 RRQTLLQIRSEGITELLDCMTADRVNIMILSNKHSKPIAYDSKEKWFGTETEDKK--SQR 532
L I ELL + + I ++S K K ++ E +GTE + + S+
Sbjct: 415 SPHLLTNYEPVRIKELLSMLIPSNMKIQVVSQKF-KGQEGNTNEPVYGTEIKVTRISSET 473
Query: 533 NGSNVG*TPNRGPQFYLPEKNIYITTNFD 619
+LPEKN YI T FD
Sbjct: 474 MQKYEEALKTSHHALHLPEKNQYIATKFD 502
>Z92782-14|CAI46605.1| 985|Caenorhabditis elegans Hypothetical
protein Y70C5C.1 protein.
Length = 985
Score = 61.7 bits (143), Expect = 5e-10
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 3/209 (1%)
Frame = +2
Query: 2 YLLGHEXXXXXXXXXXXXVWALGIYTGNSESGIDYTSMYSLFSTQVVLTKDGLDHVDEVL 181
+L+GHE W + + +G + + + F + L+ +GL+HVDE++
Sbjct: 299 HLIGHEGHGSLLSELKRLGWVVSLQSGY----VVQAAGFGNFQVGIELSTEGLEHVDEII 354
Query: 182 EAIFSYINMLKKIGPSERIYNETRH-RRDEFSLRRGVPASGLCGDSGREHAVLPARTLHN 358
+ +F+YI M++ GP + ++ E R F + + +P + + +
Sbjct: 355 QLMFNYIGMMQSSGPKQWVHEELAELRAVTFRFKDKEQPMAMASCVAARLQRIPFKHVLS 414
Query: 359 RRQTLLQIRSEGITELLDCMTADRVNIMILSNKHSKPIAYDSKEKWFGTETEDKK--SQR 532
L I ELL + + I ++S K K ++ E +GTE + + S+
Sbjct: 415 SPHLLTNYEPVRIKELLSMLIPSNMKIQVVSQKF-KGQEGNTNEPVYGTEIKVTRISSET 473
Query: 533 NGSNVG*TPNRGPQFYLPEKNIYITTNFD 619
+LPEKN YI T FD
Sbjct: 474 MQKYEEALKTSHHALHLPEKNQYIATKFD 502
>U23180-3|AAC46729.2| 856|Caenorhabditis elegans Hypothetical
protein C28F5.4 protein.
Length = 856
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/82 (29%), Positives = 43/82 (52%)
Frame = +2
Query: 2 YLLGHEXXXXXXXXXXXXVWALGIYTGNSESGIDYTSMYSLFSTQVVLTKDGLDHVDEVL 181
+L+GHE W + + N S + +FS + L+ +GL+HVD+V+
Sbjct: 300 HLIGHEGPGSLLSELKRLGWVISLEADNHT----IASGFGVFSVTMDLSTEGLEHVDDVI 355
Query: 182 EAIFSYINMLKKIGPSERIYNE 247
+ +F++I LK GP + I++E
Sbjct: 356 QLVFNFIGFLKSSGPQKWIHDE 377
>U88167-7|AAB42229.1| 378|Caenorhabditis elegans Hypothetical
protein D2092.2 protein.
Length = 378
Score = 34.3 bits (75), Expect = 0.086
Identities = 18/59 (30%), Positives = 34/59 (57%)
Frame = -2
Query: 374 VESVAGYVVFGREELHVLGQSLHIVRWLGLLFEAKTRLFYVLSRCKSFPKVRFSLTCLC 198
VE +A V +E+L +LG +++++ ++F + + +VLS+ KSF F+ LC
Sbjct: 126 VEKIAESPV--KEKLSILGHKVNLIKTTPVVFSTEESMEFVLSKAKSFDGFPFTWQRLC 182
>Z82073-7|CAB04922.2| 327|Caenorhabditis elegans Hypothetical
protein W06D12.1 protein.
Length = 327
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 252 DIEETSFRFEEESQPADYVETLAENMQFFPPEHYITGDRLYYKY 383
++ ++ + ++S P E L EN Q P H GD +Y+K+
Sbjct: 6 ELPQSIQQLNDDSAPVCKYEVLMENAQGPPLSHATVGDLVYHKW 49
>Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical
protein W07A8.3 protein.
Length = 784
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +2
Query: 332 VLPARTLHNRRQTLLQIRSEGITELLDCMTADRVNIMILSNKHSKPIAYDSKEK 493
++ A TLH ++ LL+ + + E++DC ++ N H++P+ D K
Sbjct: 75 IVLADTLHKSKEGLLKAETAVVREMIDCQP------YVVVNVHAEPLKLDGYAK 122
>AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein.
Length = 784
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +2
Query: 332 VLPARTLHNRRQTLLQIRSEGITELLDCMTADRVNIMILSNKHSKPIAYDSKEK 493
++ A TLH ++ LL+ + + E++DC ++ N H++P+ D K
Sbjct: 75 IVLADTLHKSKEGLLKAETAVVREMIDCQP------YVVVNVHAEPLKLDGYAK 122
>AF022973-11|AAK84524.3| 560|Caenorhabditis elegans Hypothetical
protein F25G6.1 protein.
Length = 560
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 407 LDCMT--ADRVNIMILSNKHSKPIAYDSKEKWFGTETEDK 520
LD MT D ++S+K+ KP+A SK FGT +K
Sbjct: 369 LDVMTIRCDYHIFSLMSHKYGKPVATKSKPYVFGTMENEK 408
>AC006733-4|AAF60486.1| 319|Caenorhabditis elegans Dehydrogenases,
short chain protein9 protein.
Length = 319
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -1
Query: 540 EPFLWDFLSSVSVPNHFSLESYAMGL 463
+P++WD +++V + NH+ YA L
Sbjct: 120 DPYVWDTINNVGLRNHYFCTVYAARL 145
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,146,131
Number of Sequences: 27780
Number of extensions: 347439
Number of successful extensions: 1051
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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