Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30472
(581 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 26 0.27
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 25 0.62
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 25 0.62
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 25 0.62
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 25 0.62
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 25 0.62
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 25 0.62
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 25 0.62
DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 prot... 23 1.9
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 23 2.5
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 22 4.4
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 22 4.4
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 22 4.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 4.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 4.4
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 4.4
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 4.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 4.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 4.4
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 22 4.4
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 25.8 bits (54), Expect = 0.27
Identities = 18/75 (24%), Positives = 28/75 (37%)
Frame = +3
Query: 45 GPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPESTGAQP 224
G Q + PG P +T P + + P++ P+ P P + G
Sbjct: 15 GQQARDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMGDYT 74
Query: 225 GLTRQQPEPTQHTQN 269
L Q+ PT H Q+
Sbjct: 75 QLQPQRLAPT-HLQS 88
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.62
Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Frame = +3
Query: 45 GPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPESTGAQP 224
G Q + PG P +T P + + P++ P+ P A G QP
Sbjct: 15 GQQARDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQ------HPYAAPAPGHGLQP 68
Query: 225 GL---TRQQPEPTQHTQNQLEHSQ 287
+ T+ QP+ T Q ++Q
Sbjct: 69 TMGDYTQLQPQRLASTHLQSPNTQ 92
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.62
Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Frame = +3
Query: 45 GPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPESTGAQP 224
G Q + PG P +T P + + P++ P+ P A G QP
Sbjct: 15 GQQARDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQ------HPYAAPAPGHGLQP 68
Query: 225 GL---TRQQPEPTQHTQNQLEHSQ 287
+ T+ QP+ T Q ++Q
Sbjct: 69 TMGDYTQLQPQRLASTHLQSPNTQ 92
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 24.6 bits (51), Expect = 0.62
Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Frame = +3
Query: 45 GPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPESTGAQP 224
G Q + PG P +T P + + P++ P+ P A G QP
Sbjct: 15 GQQARDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQ------HPYAAPAPGHGLQP 68
Query: 225 GL---TRQQPEPTQHTQNQLEHSQ 287
+ T+ QP+ T Q ++Q
Sbjct: 69 TMGDYTQLQPQRLASTHLQSPNTQ 92
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.62
Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Frame = +3
Query: 45 GPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPESTGAQP 224
G Q + PG P +T P + + P++ P+ P A G QP
Sbjct: 15 GQQARDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQ------HPYAAPAPGHGLQP 68
Query: 225 GL---TRQQPEPTQHTQNQLEHSQ 287
+ T+ QP+ T Q ++Q
Sbjct: 69 TMGDYTQLQPQRLASTHLQSPNTQ 92
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 24.6 bits (51), Expect = 0.62
Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Frame = +3
Query: 45 GPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPESTGAQP 224
G Q + PG P +T P + + P++ P+ P A G QP
Sbjct: 15 GQQARDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQ------HPYAAPAPGHGLQP 68
Query: 225 GL---TRQQPEPTQHTQNQLEHSQ 287
+ T+ QP+ T Q ++Q
Sbjct: 69 TMGDYTQLQPQRLASTHLQSPNTQ 92
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 24.6 bits (51), Expect = 0.62
Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Frame = +3
Query: 45 GPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPESTGAQP 224
G Q + PG P +T P + + P++ P+ P A G QP
Sbjct: 15 GQQARDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQ------HPYAAPAPGHGLQP 68
Query: 225 GL---TRQQPEPTQHTQNQLEHSQ 287
+ T+ QP+ T Q ++Q
Sbjct: 69 TMGDYTQLQPQRLASTHLQSPNTQ 92
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.62
Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Frame = +3
Query: 45 GPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPESTGAQP 224
G Q + PG P +T P + + P++ P+ P A G QP
Sbjct: 15 GQQARDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQYPQ------HPYAAPAPGHGLQP 68
Query: 225 GL---TRQQPEPTQHTQNQLEHSQ 287
+ T+ QP+ T Q ++Q
Sbjct: 69 TMGDYTQLQPQRLASTHLQSPNTQ 92
>DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8
protein.
Length = 496
Score = 23.0 bits (47), Expect = 1.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 174 PQPDPTATQPESTGAQPGLTRQQPEPTQHTQ 266
P P+P TQ +T ++P +QP + TQ
Sbjct: 397 PTPEPQPTQ--TTESEPTQASEQPTESSTTQ 425
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 22.6 bits (46), Expect = 2.5
Identities = 26/105 (24%), Positives = 38/105 (36%), Gaps = 1/105 (0%)
Frame = +3
Query: 36 ESTGPQP-ESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPEST 212
E G P E T P R++P T Q + +PR + E+TRP P +
Sbjct: 300 EIPGQNPGEKTNIAP---RERPRATDHQRRNEPKRPRPNIDRHEVTRP------AAPANR 350
Query: 213 GAQPGLTRQQPEPTQHTQNQLEHSQNLLDHRQDLQAGQEQRDQRP 347
G G ++ + Q NQ S N + + R P
Sbjct: 351 G--NGFPKRSSDEQQWRNNQPSTSNNRWHNNNGNNSNNHWRKNNP 393
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.8 bits (44), Expect = 4.4
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -2
Query: 88 LVSPGCAPVDSGCGP 44
L SPGC P G P
Sbjct: 387 LASPGCGPGQGGLQP 401
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 97 GCCLVSPGCAPVDSGCGPVD 38
GC L SPGC + G +D
Sbjct: 222 GCVLCSPGCFSLFRGKALMD 241
Score = 21.4 bits (43), Expect = 5.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 244 GCCLVSPGC 218
GC L SPGC
Sbjct: 222 GCVLCSPGC 230
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 97 GCCLVSPGCAPVDSGCGPVD 38
GC L SPGC + G +D
Sbjct: 536 GCVLCSPGCFSLFRGKALMD 555
Score = 21.4 bits (43), Expect = 5.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 244 GCCLVSPGC 218
GC L SPGC
Sbjct: 536 GCVLCSPGC 544
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 97 GCCLVSPGCAPVDSGCGPVD 38
GC L SPGC + G +D
Sbjct: 796 GCVLCSPGCFSLFRGKALMD 815
Score = 21.4 bits (43), Expect = 5.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 244 GCCLVSPGC 218
GC L SPGC
Sbjct: 796 GCVLCSPGC 804
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 97 GCCLVSPGCAPVDSGCGPVD 38
GC L SPGC + G +D
Sbjct: 796 GCVLCSPGCFSLFRGKALMD 815
Score = 21.4 bits (43), Expect = 5.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 244 GCCLVSPGC 218
GC L SPGC
Sbjct: 796 GCVLCSPGC 804
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 97 GCCLVSPGCAPVDSGCGPVD 38
GC L SPGC + G +D
Sbjct: 769 GCVLCSPGCFSLFRGKALMD 788
Score = 21.4 bits (43), Expect = 5.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 244 GCCLVSPGC 218
GC L SPGC
Sbjct: 769 GCVLCSPGC 777
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 97 GCCLVSPGCAPVDSGCGPVD 38
GC L SPGC + G +D
Sbjct: 769 GCVLCSPGCFSLFRGKALMD 788
Score = 21.4 bits (43), Expect = 5.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 244 GCCLVSPGC 218
GC L SPGC
Sbjct: 769 GCVLCSPGC 777
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 97 GCCLVSPGCAPVDSGCGPVD 38
GC L SPGC + G +D
Sbjct: 796 GCVLCSPGCFSLFRGKALMD 815
Score = 21.4 bits (43), Expect = 5.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 244 GCCLVSPGC 218
GC L SPGC
Sbjct: 796 GCVLCSPGC 804
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 97 GCCLVSPGCAPVDSGCGPVD 38
GC L SPGC + G +D
Sbjct: 796 GCVLCSPGCFSLFRGKALMD 815
Score = 21.4 bits (43), Expect = 5.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 244 GCCLVSPGC 218
GC L SPGC
Sbjct: 796 GCVLCSPGC 804
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.8 bits (44), Expect = 4.4
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -2
Query: 88 LVSPGCAPVDSGCGP 44
L SPGC P G P
Sbjct: 387 LASPGCGPGQGGLQP 401
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,127
Number of Sequences: 336
Number of extensions: 1859
Number of successful extensions: 29
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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