Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30472
(581 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 50 2e-07
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 50 3e-07
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 31 0.093
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 31 0.12
SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15 |Sc... 30 0.21
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 29 0.37
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 29 0.50
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 28 1.1
SPAC2C4.17c |||MS ion channel protein 2|Schizosaccharomyces pomb... 27 2.0
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 26 3.5
SPCC794.11c |||ENTH domain protein Ent3|Schizosaccharomyces pomb... 26 3.5
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F... 26 3.5
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 26 4.6
SPBC25B2.03 |||zf-C3HC4 type zinc finger|Schizosaccharomyces pom... 25 6.1
SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pomb... 25 8.1
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 50.4 bits (115), Expect = 2e-07
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 ESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQP-DPTATQPEST 212
+ TG QP TG P +T P++T P+ TG P++TG Q + T P P +
Sbjct: 1079 QPTGLQPHMTGVMPQVTGVMPQMTGVVPQMTGVMPQMTGVQVQKTGAMPQQPVNYGYQVA 1138
Query: 213 GAQPGLTRQQPEPT 254
G QP T +PT
Sbjct: 1139 GMQPQATGIISQPT 1152
Score = 50.0 bits (114), Expect = 2e-07
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Frame = +3
Query: 30 QPESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQP--------ELTRPQPD 185
QP TG P+ TG P +T P++T P+ TG Q + TGA P ++ QP
Sbjct: 1084 QPHMTGVMPQVTGVMPQMTGVVPQMTGVMPQMTGVQVQKTGAMPQQPVNYGYQVAGMQPQ 1143
Query: 186 PTATQPESTGAQPGLTRQQPEPT-QHTQ 266
T + TG + T +PT HTQ
Sbjct: 1144 ATGIISQPTGIRAQATGIMTQPTGLHTQ 1171
Score = 49.6 bits (113), Expect = 3e-07
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +3
Query: 57 ESTGAQPGL---TRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPESTGAQP 224
++TG QP + T QP +T P+ TG P++TG P++T P T Q + TGA P
Sbjct: 1069 QATGYQPLMVQPTGLQPHMTGVMPQVTGVMPQMTGVVPQMTGVMPQMTGVQVQKTGAMP 1127
Score = 47.2 bits (107), Expect = 2e-06
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = +3
Query: 30 QPESTGPQPESTGAQP-GLTRQQP-ELTATQP---ESTGAQPRLTGAQPELTRPQPDPTA 194
QP P P + QP G + P + T QP + TG QP +TG P++T P T
Sbjct: 1044 QPTGFQPPPSALPIQPTGYMQPIPVQATGYQPLMVQPTGLQPHMTGVMPQVTGVMPQMTG 1103
Query: 195 TQPESTGAQPGLTRQQPEPT 254
P+ TG P +T Q + T
Sbjct: 1104 VVPQMTGVMPQMTGVQVQKT 1123
Score = 45.2 bits (102), Expect = 7e-06
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +3
Query: 30 QPESTGPQPESTG-AQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPE 206
QP++TG P++TG QP T QP++T P+S QP++TG Q + T P +Q
Sbjct: 1182 QPQATGIMPQATGMMQP--TGMQPQVTGIMPQSMPMQPQMTGVQVQKTGMVAQPMLSQ-- 1237
Query: 207 STGAQPGLT 233
TG Q T
Sbjct: 1238 YTGYQQNYT 1246
Score = 42.7 bits (96), Expect = 4e-05
Identities = 30/81 (37%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +3
Query: 30 QPESTG--PQPESTGAQPGLTRQQPELTATQP----ESTGAQPRLTGAQPELTRPQPDPT 191
QP++TG QP AQ QP TQ + TG QP+ TG P+ T PT
Sbjct: 1141 QPQATGIISQPTGIRAQATGIMTQPTGLHTQATGMMQPTGMQPQATGIMPQAT-GMMQPT 1199
Query: 192 ATQPESTGAQPGLTRQQPEPT 254
QP+ TG P QP+ T
Sbjct: 1200 GMQPQVTGIMPQSMPMQPQMT 1220
Score = 41.5 bits (93), Expect = 9e-05
Identities = 36/116 (31%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Frame = +3
Query: 36 ESTGPQPESTGAQPGLTRQQPELTATQPESTG--AQPRL---TGAQPELTRPQPDPTATQ 200
+ TG QP+ TG P QP++T Q + TG AQP L TG Q T P P A
Sbjct: 1197 QPTGMQPQVTGIMPQSMPMQPQMTGVQVQKTGMVAQPMLSQYTGYQQNYT-PTAMPAA-- 1253
Query: 201 PESTGAQPGLTRQQPEPTQHTQNQLEHSQNLLDHRQDLQAGQEQRDQRPEI*KQAQ 368
+ G QP + Q + Q + + QD G EQ+ + +Q Q
Sbjct: 1254 -DGYGMQPSMNDTQAYYNMNAQTPVNYG---FAGGQDTSFGYEQQQMYSPMQQQQQ 1305
Score = 39.9 bits (89), Expect = 3e-04
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 ESTGPQPESTGAQPGLT-RQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPEST 212
++TG + TG T QP T QP++TG P+ TG + T QP T P+S
Sbjct: 1157 QATGIMTQPTGLHTQATGMMQP--TGMQPQATGIMPQATGMM-QPTGMQPQVTGIMPQSM 1213
Query: 213 GAQPGLTRQQPEPT 254
QP +T Q + T
Sbjct: 1214 PMQPQMTGVQVQKT 1227
Score = 39.5 bits (88), Expect = 4e-04
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQP-----ELTATQPESTGAQPRLTGAQPELTRPQPDPTAT 197
P+ TG Q + TGA P QQP ++ QP++TG + TG + + T PT
Sbjct: 1113 PQMTGVQVQKTGAMP----QQPVNYGYQVAGMQPQATGIISQPTGIRAQATGIMTQPTGL 1168
Query: 198 QPESTG-AQPGLTRQQPEPT 254
++TG QP T QP+ T
Sbjct: 1169 HTQATGMMQP--TGMQPQAT 1186
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with
EF hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 49.6 bits (113), Expect = 3e-07
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPEST 212
P+ TG QP G Q + Q+ + P+ TG QP++TG Q + + P+ T
Sbjct: 514 PQRTGMQPMMPGLQQPMAPQRTGMQPMMPQRTGMQPQMTGFQQPMAPQRTGMQPMMPQRT 573
Query: 213 GAQPGLT-RQQPEPTQHTQNQ 272
G QP + QQP Q T Q
Sbjct: 574 GMQPQMPGMQQPMAPQRTGMQ 594
Score = 47.2 bits (107), Expect = 2e-06
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPEST 212
P+ TG QP+ TG Q + Q+ + P+ TG QP++ G Q + + P+ T
Sbjct: 542 PQRTGMQPQMTGFQQPMAPQRTGMQPMMPQRTGMQPQMPGMQQPMAPQRTGMQPMMPQRT 601
Query: 213 GAQ----PGLTRQQPEPTQHT--QNQLEHSQN-LLDHRQDLQAGQEQR 335
G Q P T QP Q T Q Q+ Q + R +Q QR
Sbjct: 602 GMQQPMAPQRTGMQPMMPQRTGMQPQMPGMQQPMAPQRTGMQPMMPQR 649
Score = 46.8 bits (106), Expect = 2e-06
Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 12/113 (10%)
Frame = +3
Query: 33 PESTGPQPESTGAQ----PGLTRQQPELTATQ----PESTGAQPRLTGAQ----PELTRP 176
P+ TG QP+ TG Q P T QP++T Q P+ TG QP++TG Q P+ T
Sbjct: 460 PQRTGLQPQMTGFQQPMVPQRTGMQPQMTGFQQPMMPQRTGLQPQMTGFQQPMVPQRTGM 519
Query: 177 QPDPTATQPESTGAQPGLTRQQPEPTQHTQNQLEHSQNLLDHRQDLQAGQEQR 335
QP Q + G+ P+ T Q + R +Q QR
Sbjct: 520 QPMMPGLQQPMAPQRTGMQPMMPQRTGMQPQMTGFQQPMAPQRTGMQPMMPQR 572
Score = 46.4 bits (105), Expect = 3e-06
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 6/101 (5%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPEST 212
P+ TG QP+ G Q + Q+ + P+ TG QP++ G Q + + P+ T
Sbjct: 619 PQRTGMQPQMPGMQQPMAPQRTGMQPMMPQRTGMQPQMPGMQQPMAPQRTGMQPMAPQRT 678
Query: 213 GAQP------GLTRQQPEPTQHTQNQLEHSQNLLDHRQDLQ 317
G QP G+ Q P Q Q Q ++ R +Q
Sbjct: 679 GMQPMMPQRTGMQPQMPGMQQPMAPQRTGMQPMMPQRTGMQ 719
Score = 46.4 bits (105), Expect = 3e-06
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPEST 212
P+ TG QP+ G Q + Q+ + P+ TG QP++ G Q + + P+ T
Sbjct: 685 PQRTGMQPQMPGMQQPMAPQRTGMQPMMPQRTGMQPQMPGMQQPMAPQRTGMQPMAPQRT 744
Query: 213 GAQPGLT 233
G QP +T
Sbjct: 745 GMQPQMT 751
Score = 42.3 bits (95), Expect = 5e-05
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Frame = +3
Query: 57 ESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQ----PELTRPQPDPTATQ----PEST 212
++ G +T QP+ A P+ TG QP++TG Q P+ T QP T Q P+ T
Sbjct: 406 QAAGIPSQITGFQPQ--AMMPQRTGMQPQMTGFQQPMIPQRTGMQPQMTGFQQPMMPQRT 463
Query: 213 GAQPGLTR-QQPEPTQHTQNQLE---HSQNLLDHRQDLQ 317
G QP +T QQP Q T Q + Q ++ R LQ
Sbjct: 464 GLQPQMTGFQQPMVPQRTGMQPQMTGFQQPMMPQRTGLQ 502
Score = 39.1 bits (87), Expect = 5e-04
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQPELTATQPESTGAQ----PRLTGAQPELTRPQPDPTATQ 200
P+ TG Q + G+ P+ T QP+ G Q P+ TG QP + P T Q
Sbjct: 598 PQRTGMQQPMAPQRTGMQPMMPQRTGMQPQMPGMQQPMAPQRTGMQPMM----PQRTGMQ 653
Query: 201 PESTGAQ----PGLTRQQPEPTQHTQNQ 272
P+ G Q P T QP Q T Q
Sbjct: 654 PQMPGMQQPMAPQRTGMQPMAPQRTGMQ 681
Score = 38.7 bits (86), Expect = 6e-04
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQPELTATQPESTGAQ----PRLTGAQPELTRPQPDPTATQ 200
P+ TG QP + + G+ P+ T QP+ G Q P+ TG QP + P T Q
Sbjct: 665 PQRTGMQPMAP-QRTGMQPMMPQRTGMQPQMPGMQQPMAPQRTGMQPMM----PQRTGMQ 719
Query: 201 PESTGAQ----PGLTRQQPEPTQHTQNQ 272
P+ G Q P T QP Q T Q
Sbjct: 720 PQMPGMQQPMAPQRTGMQPMAPQRTGMQ 747
Score = 37.5 bits (83), Expect = 0.001
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQ--PELTRPQ-PDPT 191
P+ TG QP+ G Q + Q+ + P+ TG QP++TG P+ T P PT
Sbjct: 713 PQRTGMQPQMPGMQQPMAPQRTGMQPMAPQRTGMQPQMTGGPMLPQRTGGMAPQPT 768
Score = 32.7 bits (71), Expect = 0.040
Identities = 24/74 (32%), Positives = 30/74 (40%)
Frame = +3
Query: 51 QPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPESTGAQPGL 230
QP+ TGA PG Q QP +Q + QP+ T QP+ TGA P
Sbjct: 113 QPQQTGAIPGFAPQPTGFVQPQPTGFMSQQPASFMQPQRT---GGAGFIQPQRTGAMPA- 168
Query: 231 TRQQPEPTQHTQNQ 272
QP+ Q Q
Sbjct: 169 --YQPQMNNFMQPQ 180
Score = 31.5 bits (68), Expect = 0.093
Identities = 29/74 (39%), Positives = 37/74 (50%), Gaps = 12/74 (16%)
Frame = +3
Query: 30 QPESTGP----QPESTG-AQP---GLTRQQPELTATQPESTGA----QPRLTGAQPELTR 173
QP+ TG P+ TG QP G QQP + QP+ TG QP+ TGA P +
Sbjct: 113 QPQQTGAIPGFAPQPTGFVQPQPTGFMSQQP-ASFMQPQRTGGAGFIQPQRTGAMPAY-Q 170
Query: 174 PQPDPTATQPESTG 215
PQ + QP+ TG
Sbjct: 171 PQMN-NFMQPQKTG 183
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 31.5 bits (68), Expect = 0.093
Identities = 18/90 (20%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +3
Query: 69 AQPGLTRQQPELTATQPES--TGAQPRLTGAQPELTRPQPDPTATQPESTGAQPGLTRQQ 242
++P + P+L A Q ES + +P +PE + P+P P ++P +
Sbjct: 153 SKPIEEKPMPDLGAEQKESAPSSTKPAPDAKEPEFSSPKPKPAKSEPVKQSKPKATETAR 212
Query: 243 PEPTQHTQNQLEHSQNLLDHRQDLQAGQEQ 332
P +++++ ++ L + L+ Q +
Sbjct: 213 PSSFSRNEDRVKMNRMRLRIAERLKESQNR 242
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 31.1 bits (67), Expect = 0.12
Identities = 31/103 (30%), Positives = 41/103 (39%), Gaps = 1/103 (0%)
Frame = +3
Query: 30 QPESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQ-PDPTATQPE 206
QP+ P + A +Q P+L P + QP P P P P Q +
Sbjct: 112 QPQQYRQLPPNMVAATNAPQQHPQLQRMMPILSSNQPIQQLPLPNQASPYIPVPLQQQQQ 171
Query: 207 STGAQPGLTRQQPEPTQHTQNQLEHSQNLLDHRQDLQAGQEQR 335
S QP +QQP+ QH Q Q +Q LQ Q+QR
Sbjct: 172 S---QP---QQQPQQQQHQQPQQPQPP-----QQPLQQQQQQR 203
>SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1063
Score = 30.3 bits (65), Expect = 0.21
Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 9/143 (6%)
Frame = +3
Query: 30 QPESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPES 209
Q + QP+ T + P A Q S R+ P LT+ Q + Q +
Sbjct: 160 QQQQQSQQPQQTQQPQASSPTAPNTEANQQRSGSVPGRIV---PALTQQQLNNLCNQITA 216
Query: 210 TGAQPG-----LTRQQPEPTQHT----QNQLEHSQNLLDHRQDLQAGQEQRDQRPEI*KQ 362
A+ G + + Q P QNQ++ ++L +Q Q Q+Q+ Q+ + +Q
Sbjct: 217 LLARNGNPPIPMQKLQSMPPARLISIYQNQIQKFRSLQHMQQQQQQQQQQQQQQQQQQQQ 276
Query: 363 AQVVL*KQTVNQRKSIQQKH*WP 431
Q +Q Q+K Q +P
Sbjct: 277 QQQQQQQQQQQQQKQAPQNAFFP 299
Score = 29.9 bits (64), Expect = 0.28
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 175 HSQTPLQHSQNQLEHSQDLLDNSQNPLNTPRI 270
H Q LQH Q QL Q+ NSQN NT ++
Sbjct: 400 HLQIILQHRQQQLNKIQNARMNSQNAPNTNKL 431
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 29.5 bits (63), Expect = 0.37
Identities = 14/71 (19%), Positives = 24/71 (33%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPEST 212
P + P + P + P +AT P + P + P + P + T P +
Sbjct: 1583 PSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1642
Query: 213 GAQPGLTRQQP 245
P + P
Sbjct: 1643 PTSPSYSPTSP 1653
Score = 28.3 bits (60), Expect = 0.87
Identities = 14/69 (20%), Positives = 21/69 (30%)
Frame = +3
Query: 39 STGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPESTGA 218
S P P P + T P + P + P + P +AT P +
Sbjct: 1557 SYSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPT 1616
Query: 219 QPGLTRQQP 245
P + P
Sbjct: 1617 SPSYSPTSP 1625
Score = 28.3 bits (60), Expect = 0.87
Identities = 13/71 (18%), Positives = 23/71 (32%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPEST 212
P + P + P + P + T P + P + P + P + T P +
Sbjct: 1576 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYS 1635
Query: 213 GAQPGLTRQQP 245
P + P
Sbjct: 1636 PTSPSYSPTSP 1646
Score = 28.3 bits (60), Expect = 0.87
Identities = 13/71 (18%), Positives = 23/71 (32%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPEST 212
P + P + P + P + T P + P + P + P + T P +
Sbjct: 1597 PSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1656
Query: 213 GAQPGLTRQQP 245
P + P
Sbjct: 1657 PTSPSYSPTSP 1667
Score = 28.3 bits (60), Expect = 0.87
Identities = 13/71 (18%), Positives = 23/71 (32%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPEST 212
P + P + P + P + T P + P + P + P + T P +
Sbjct: 1604 PSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1663
Query: 213 GAQPGLTRQQP 245
P + P
Sbjct: 1664 PTSPSYSPTSP 1674
Score = 27.9 bits (59), Expect = 1.1
Identities = 13/71 (18%), Positives = 23/71 (32%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPEST 212
P + P + P + P + T P + P + P + P + T P +
Sbjct: 1590 PSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1649
Query: 213 GAQPGLTRQQP 245
P + P
Sbjct: 1650 PTSPSYSPTSP 1660
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/71 (18%), Positives = 23/71 (32%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPEST 212
P + P + P + P + T P + P + P + P + T P +
Sbjct: 1611 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1670
Query: 213 GAQPGLTRQQP 245
P + P
Sbjct: 1671 PTSPSYSPTSP 1681
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/71 (18%), Positives = 23/71 (32%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPEST 212
P + P + P + P + T P + P + P + P + T P +
Sbjct: 1618 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1677
Query: 213 GAQPGLTRQQP 245
P + P
Sbjct: 1678 PTSPSYSPTSP 1688
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/71 (18%), Positives = 23/71 (32%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPEST 212
P + P + P + P + T P + P + P + P + T P +
Sbjct: 1625 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1684
Query: 213 GAQPGLTRQQP 245
P + P
Sbjct: 1685 PTSPSYSPTSP 1695
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/71 (18%), Positives = 23/71 (32%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPEST 212
P + P + P + P + T P + P + P + P + T P +
Sbjct: 1632 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1691
Query: 213 GAQPGLTRQQP 245
P + P
Sbjct: 1692 PTSPSYSPTSP 1702
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/71 (18%), Positives = 23/71 (32%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPEST 212
P + P + P + P + T P + P + P + P + T P +
Sbjct: 1639 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1698
Query: 213 GAQPGLTRQQP 245
P + P
Sbjct: 1699 PTSPSYSPTSP 1709
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/71 (18%), Positives = 23/71 (32%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPEST 212
P + P + P + P + T P + P + P + P + T P +
Sbjct: 1646 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1705
Query: 213 GAQPGLTRQQP 245
P + P
Sbjct: 1706 PTSPSYSPTSP 1716
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/71 (18%), Positives = 23/71 (32%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPEST 212
P + P + P + P + T P + P + P + P + T P +
Sbjct: 1653 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1712
Query: 213 GAQPGLTRQQP 245
P + P
Sbjct: 1713 PTSPSYSPTSP 1723
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/71 (18%), Positives = 23/71 (32%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPEST 212
P + P + P + P + T P + P + P + P + T P +
Sbjct: 1660 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1719
Query: 213 GAQPGLTRQQP 245
P + P
Sbjct: 1720 PTSPSYSPTSP 1730
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/71 (18%), Positives = 23/71 (32%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPEST 212
P + P + P + P + T P + P + P + P + T P +
Sbjct: 1667 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1726
Query: 213 GAQPGLTRQQP 245
P + P
Sbjct: 1727 PTSPSYSPTSP 1737
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/71 (18%), Positives = 23/71 (32%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPEST 212
P + P + P + P + T P + P + P + P + T P +
Sbjct: 1674 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1733
Query: 213 GAQPGLTRQQP 245
P + P
Sbjct: 1734 PTSPSYSPTSP 1744
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/71 (18%), Positives = 23/71 (32%)
Frame = +3
Query: 33 PESTGPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPEST 212
P + P + P + P + T P + P + P + P + T P +
Sbjct: 1681 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1740
Query: 213 GAQPGLTRQQP 245
P + P
Sbjct: 1741 PTSPSYSPTSP 1751
Score = 26.6 bits (56), Expect = 2.6
Identities = 15/73 (20%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Frame = +3
Query: 33 PESTG--PQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPE 206
P S G P + P + P + T P + P + P + P + T P
Sbjct: 1560 PSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPS 1619
Query: 207 STGAQPGLTRQQP 245
+ P + P
Sbjct: 1620 YSPTSPSYSPTSP 1632
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 29.1 bits (62), Expect = 0.50
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 69 AQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQP 203
A G +Q + P S+ P A+PE T P P P A++P
Sbjct: 200 AGEGAAEEQEKKEEFAPSSS--TPSADSAKPETTNPPPQPQASEP 242
Score = 26.2 bits (55), Expect = 3.5
Identities = 12/56 (21%), Positives = 27/56 (48%)
Frame = +3
Query: 186 PTATQPESTGAQPGLTRQQPEPTQHTQNQLEHSQNLLDHRQDLQAGQEQRDQRPEI 353
P+++ P + A+P T P+P + + + L+ +A +++ DQ +I
Sbjct: 216 PSSSTPSADSAKPETTNPPPQPQASEPMEEDKTAEELEEAATKEALKKKADQEKQI 271
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 27.9 bits (59), Expect = 1.1
Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +3
Query: 30 QPESTGPQPESTGAQPGLTRQQPELTA--TQPESTGAQPRLTGAQPELTRPQPDPTATQP 203
+P S P TGA QP A TQPE + + T P P P +QP
Sbjct: 193 RPSSPNPAEHMTGAYVNTPLNQPPSYAASTQPEFQQTTSPIFSSSS--TPPPPPPRPSQP 250
Query: 204 ESTGAQ 221
S +Q
Sbjct: 251 TSGESQ 256
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/48 (27%), Positives = 18/48 (37%)
Frame = +3
Query: 150 GAQPELTRPQPDPTATQPESTGAQPGLTRQQPEPTQHTQNQLEHSQNL 293
G P + + TA ++ P T QP PT + Q Q L
Sbjct: 72 GVVPNVNPTDANRTANPNTNSNPNPNATNAQPNPTMFSTGQFSTEQGL 119
>SPAC2C4.17c |||MS ion channel protein 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 840
Score = 27.1 bits (57), Expect = 2.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 154 HSQNLLDHSQTPLQHSQNQLEHSQDLLDNSQ 246
+SQ D+ QT +QN ++++Q DN+Q
Sbjct: 788 NSQGATDNGQTTTNTTQNNVDNTQATTDNTQ 818
Score = 25.0 bits (52), Expect = 8.1
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +1
Query: 130 EHSQDLLEHSQNLLDHSQTPLQHSQNQLEHSQDLLDNSQN 249
++ Q +QN +D++Q ++Q ++ Q +D SQN
Sbjct: 794 DNGQTTTNTTQNNVDNTQATTDNTQANTDNMQVAIDYSQN 833
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 26.2 bits (55), Expect = 3.5
Identities = 15/65 (23%), Positives = 28/65 (43%)
Frame = +3
Query: 93 QPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPESTGAQPGLTRQQPEPTQHTQNQ 272
Q + T ES A P+ + + + P P + AQP +++ EP T+N
Sbjct: 424 QDKSTVVPQESATATPKRSPSATPTSALPPIGKFAPPTTAKAQPAPEKRRGEPAVQTRNH 483
Query: 273 LEHSQ 287
+ ++
Sbjct: 484 SKRTR 488
>SPCC794.11c |||ENTH domain protein Ent3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 476
Score = 26.2 bits (55), Expect = 3.5
Identities = 15/60 (25%), Positives = 23/60 (38%)
Frame = +3
Query: 45 GPQPESTGAQPGLTRQQPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPESTGAQP 224
G S A TR T Q + QP+ A +L +P+ QP++ + P
Sbjct: 239 GDGGSSDAATANSTRGSRRTTTKQSDKAPEQPKQESAMIDLLGLDNEPSPAQPQTNTSAP 298
>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 26.2 bits (55), Expect = 3.5
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +3
Query: 72 QPGLTRQQPELTATQPESTGAQPRLTG----AQPELTRPQPDPTATQPES-TGAQPGLTR 236
+ + R + TA +P +T + L +Q ++ P P+PT QP +G P R
Sbjct: 345 EKAMGRAIQQATAAEPLATPPRHPLNATNGTSQSNISTPLPEPTPGQPRKVSGHNPPSAR 404
Query: 237 QQPEPTQHTQNQ 272
+ P + N+
Sbjct: 405 RLPSASSVKFNE 416
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 25.8 bits (54), Expect = 4.6
Identities = 21/102 (20%), Positives = 37/102 (36%)
Frame = +3
Query: 93 QPELTATQPESTGAQPRLTGAQPELTRPQPDPTATQPESTGAQPGLTRQQPEPTQHTQNQ 272
+P A+ P ++ + + A P P T PES+ + EP+Q
Sbjct: 595 RPTPNASSPLDVRSKQKPSSANSNAPTPAPTVNTTNPESSTNEATSVGPALEPSQGA--N 652
Query: 273 LEHSQNLLDHRQDLQAGQEQRDQRPEI*KQAQVVL*KQTVNQ 398
+ S + LD++ P ++ V K + NQ
Sbjct: 653 VHKSDSELDNQNQSGKSNPDTSATPSAPTESTTVATKSSDNQ 694
>SPBC25B2.03 |||zf-C3HC4 type zinc finger|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 554
Score = 25.4 bits (53), Expect = 6.1
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +3
Query: 135 QPRLTGAQPELTRPQPDPTATQPESTGAQPGLTRQQPEPTQHTQN 269
Q L + T P +QP+ST QP+PT HT N
Sbjct: 363 QSLLDAQSNDSTNSLPSTEVSQPDSTNISNEQEIVQPQPT-HTTN 406
>SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1647
Score = 25.0 bits (52), Expect = 8.1
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +3
Query: 81 LTRQQPELTA--TQPESTGAQPRLTGAQP 161
LTR + EL T PE+ GA R G QP
Sbjct: 722 LTRNKSELNVNLTFPENLGASYRTPGVQP 750
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,745,435
Number of Sequences: 5004
Number of extensions: 29549
Number of successful extensions: 230
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 250133048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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