Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30471
         (723 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    25   0.62 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.5  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   2.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.6  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 287 GYCNYTETLELTSRGGWRI 343
           G   Y E +EL   GGW++
Sbjct: 295 GMLGYNEIVELQKEGGWKV 313


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 720 SKMIYLQHQQINKSITF*LTTM*VHNNIFLVI 625
           S  IYLQH QI   +TF  T     ++  L++
Sbjct: 13  SLQIYLQHNQIFGFVTFTCTRSNFRSSKLLIL 44


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 720 SKMIYLQHQQINKSITF*LTTM*VHNNIFLVI 625
           S  IYLQH QI   +TF  T     ++  L++
Sbjct: 31  SLQIYLQHNQIFGFVTFTCTRSNFRSSKLLIL 62


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 523 RCSFLPLPSMGISKTSQIL*IRTCLFCI 606
           RC +  +    +SK SQ++ I+ C F +
Sbjct: 162 RCLYRWIVLYTLSKMSQVMLIQFCAFVV 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,616
Number of Sequences: 336
Number of extensions: 3952
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)