Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30470
         (758 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68882-1|CAA93105.1|  487|Caenorhabditis elegans Hypothetical pr...   121   5e-28
Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical pr...    33   0.29 
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr...    32   0.51 
AC024796-11|AAK29890.2|  828|Caenorhabditis elegans Hypothetical...    29   4.7  
AC024753-1|AAF60456.1|  732|Caenorhabditis elegans Hypothetical ...    29   4.7  
Z99278-4|CAB16492.1|  871|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z99278-3|CAB16493.1|  867|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z75710-9|CAB00024.2|  752|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>Z68882-1|CAA93105.1|  487|Caenorhabditis elegans Hypothetical
           protein C47E12.1 protein.
          Length = 487

 Score =  121 bits (292), Expect = 5e-28
 Identities = 55/83 (66%), Positives = 66/83 (79%)
 Frame = +3

Query: 510 SVPVDDDEDHNLVERTDGDCGFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKGPAVF 689
           SV V  DE +N +ERT GD   +KKYSHVDL+ M+DG DGERG+ VAGGRGY+LKGP VF
Sbjct: 143 SVVVSKDEANNKIERTFGDLSTKKKYSHVDLVVMVDGFDGERGTVVAGGRGYFLKGPLVF 202

Query: 690 LEQALVQLSLRMLLEKGYTPLYT 758
           LEQA++QL+L+ L  KGY PLYT
Sbjct: 203 LEQAIIQLALQRLNVKGYVPLYT 225



 Score = 74.9 bits (176), Expect = 6e-14
 Identities = 35/73 (47%), Positives = 49/73 (67%)
 Frame = +2

Query: 83  MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKMYV 262
           MVLD+D+FR +K GNP+ IR++Q+ RFKD  LVD V+E D  WRK R  AD  N+ K  +
Sbjct: 1   MVLDIDMFRTEKGGNPEIIRKSQQDRFKDPKLVDEVIELDEKWRKERFVADQLNRQKNAI 60

Query: 263 AKKLV*K*RTRNP 301
           +K +  K + + P
Sbjct: 61  SKAIGEKMKKKEP 73



 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 36/86 (41%), Positives = 50/86 (58%)
 Frame = +1

Query: 250 EDVCSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAI 429
           ++  SK IG KMK KEP G++D  V  +I   L  L  D L  LTV Q+KK+RVL+D   
Sbjct: 57  KNAISKAIGEKMKKKEPQGTDDS-VADDIVARLAELKIDELSQLTVVQLKKLRVLVDEKS 115

Query: 430 SKNDEGLLAAEKARSAALREVGNHLH 507
            +    ++A E AR   L ++GN +H
Sbjct: 116 VQTAAAVIANENARHEKLIQIGNLIH 141


>Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical protein
            ZC434.5 protein.
          Length = 1149

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 15/45 (33%), Positives = 29/45 (64%)
 Frame = +1

Query: 205  LVEEIAPRS*QFQ*TEDVCSKEIGLKMKNKEPSGSEDEPVPSEIA 339
            LV E+  +  + Q T+D  +K + LK + K+ +GS+ +P P+++A
Sbjct: 1027 LVRELKMKDAKSQETKDAIAKLLQLKKQYKDATGSDYKPAPAQLA 1071



 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +1

Query: 205 LVEEIAPRS*QFQ*TEDVCSKEIGLKMKNKEPSGSEDEP 321
           LV E+  +  + Q T+D  +K + LK + KE SGS+ +P
Sbjct: 814 LVRELKGKDAKSQATKDAIAKLLELKKQYKEVSGSDHKP 852



 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +1

Query: 205  LVEEIAPRS*QFQ*TEDVCSKEIGLKMKNKEPSGSEDEP 321
            LV E+  +  + Q T+D  +K + LK + KE +GS+ +P
Sbjct: 888  LVRELKGKDAKSQATKDAIAKLLALKKQYKEVTGSDHKP 926



 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = +1

Query: 205  LVEEIAPRS*QFQ*TEDVCSKEIGLKMKNKEPSGSEDEPVPSEIA 339
            LV ++  +  + Q T+D  +K + LK   KE +GS+ +P P+  A
Sbjct: 955  LVRDLKNKDSKSQETKDAIAKLLELKKNYKEVTGSDYKPGPAPAA 999



 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +1

Query: 205 LVEEIAPRS*QFQ*TEDVCSKEIGLKMKNKEPSGSEDEP 321
           +V ++  +  + Q T+D  +K + LK K KE +GS+ +P
Sbjct: 743 IVRDLKTKDAKSQATKDAIAKLLDLKKKYKELTGSDHKP 781


>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical
           protein F45E4.4 protein.
          Length = 2361

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 218 LRHEADNFNKLKMYVAKKLV*K*RTRNPVALKTNPSPRRSP 340
           +RHE  ++     + + K     R R+ +A+ TNPSP  SP
Sbjct: 1   MRHEEQSYGLFSFFTSSKRSVSDRPRSALAMFTNPSPSASP 41


>AC024796-11|AAK29890.2|  828|Caenorhabditis elegans Hypothetical
           protein Y48G1C.8 protein.
          Length = 828

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 322 VPSEIANNLVNLTGDNLKPLTVN 390
           VP+    N +N TGD L P TVN
Sbjct: 444 VPANFVANQINHTGDGLSPWTVN 466


>AC024753-1|AAF60456.1|  732|Caenorhabditis elegans Hypothetical
           protein Y23H5B.6 protein.
          Length = 732

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +1

Query: 292 KEPSGSEDEPVPSEIANNLVNLTGDNLKPL--TVNQIKKVRVLIDNAISKNDEGLLAAEK 465
           K+P+G  ++    E A  + N+T    KPL   V ++   + +++  +  N +    AE 
Sbjct: 563 KKPTGEPEQIKEEEAAEKISNITISKTKPLKKAVTKVSAAKKILNKKLKVNTKKTFGAED 622

Query: 466 ARSAALRE 489
                L E
Sbjct: 623 DELEELEE 630


>Z99278-4|CAB16492.1|  871|Caenorhabditis elegans Hypothetical
           protein Y53C12B.3b protein.
          Length = 871

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +2

Query: 110 ADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADN 238
           + K  +P +I ++Q     DV   D +VEQD    K RH ++N
Sbjct: 767 SQKPIDPQEISDDQDDTVPDVP--DQIVEQDNQSHKSRHNSEN 807


>Z99278-3|CAB16493.1|  867|Caenorhabditis elegans Hypothetical
           protein Y53C12B.3a protein.
          Length = 867

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +2

Query: 110 ADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADN 238
           + K  +P +I ++Q     DV   D +VEQD    K RH ++N
Sbjct: 764 SQKPIDPQEISDDQDDTVPDVP--DQIVEQDNQSHKSRHNSEN 804


>Z75710-9|CAB00024.2|  752|Caenorhabditis elegans Hypothetical
           protein D1081.3 protein.
          Length = 752

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 149 DFLEFYLDYRLYRHEISLSRGPC 81
           DF E+Y D R Y +EI    G C
Sbjct: 206 DFYEYYFDLRRYNNEICAFSGVC 228


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,355,174
Number of Sequences: 27780
Number of extensions: 332126
Number of successful extensions: 1087
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)