Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30469
(500 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118868-1|AAM50728.1| 156|Drosophila melanogaster GM26647p pro... 133 1e-31
AF216206-1|AAF65682.1| 156|Drosophila melanogaster ribosomal pr... 133 1e-31
AE014298-2436|AAN09413.1| 156|Drosophila melanogaster CG4464-PC... 133 1e-31
AE014298-2435|AAN09412.1| 156|Drosophila melanogaster CG4464-PB... 133 1e-31
AE014298-2434|AAF48633.1| 156|Drosophila melanogaster CG4464-PA... 133 1e-31
X73153-1|CAA51677.1| 156|Drosophila melanogaster ribosomal prot... 132 2e-31
AY119257-1|AAM51117.1| 155|Drosophila melanogaster SD22440p pro... 103 1e-22
AE014297-3411|AAN13960.1| 155|Drosophila melanogaster CG5338-PB... 103 1e-22
AY061282-1|AAL28830.1| 378|Drosophila melanogaster LD20087p pro... 28 6.2
AE014134-264|AAF51367.2| 378|Drosophila melanogaster CG7420-PA ... 28 6.2
>AY118868-1|AAM50728.1| 156|Drosophila melanogaster GM26647p
protein.
Length = 156
Score = 133 bits (321), Expect = 1e-31
Identities = 58/88 (65%), Positives = 71/88 (80%)
Frame = +1
Query: 13 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 192
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60
Query: 193 LRHIYIRSPVGVKTVTKIFGGANVMELH 276
LRH+Y RSP GV ++TKI+GG +H
Sbjct: 61 LRHLYHRSPAGVGSITKIYGGRKRNGVH 88
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/53 (67%), Positives = 43/53 (81%)
Frame = +3
Query: 255 RKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 413
RKRNGV PSHFCR++ ARKALQ+LE +LVEK DGGR L++ G+RDLDRI
Sbjct: 82 RKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDRI 134
>AF216206-1|AAF65682.1| 156|Drosophila melanogaster ribosomal
protein S19 protein.
Length = 156
Score = 133 bits (321), Expect = 1e-31
Identities = 58/88 (65%), Positives = 71/88 (80%)
Frame = +1
Query: 13 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 192
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60
Query: 193 LRHIYIRSPVGVKTVTKIFGGANVMELH 276
LRH+Y RSP GV ++TKI+GG +H
Sbjct: 61 LRHLYHRSPAGVGSITKIYGGRKRNGVH 88
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/53 (67%), Positives = 43/53 (81%)
Frame = +3
Query: 255 RKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 413
RKRNGV PSHFCR++ ARKALQ+LE +LVEK DGGR L++ G+RDLDRI
Sbjct: 82 RKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDRI 134
>AE014298-2436|AAN09413.1| 156|Drosophila melanogaster CG4464-PC,
isoform C protein.
Length = 156
Score = 133 bits (321), Expect = 1e-31
Identities = 58/88 (65%), Positives = 71/88 (80%)
Frame = +1
Query: 13 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 192
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60
Query: 193 LRHIYIRSPVGVKTVTKIFGGANVMELH 276
LRH+Y RSP GV ++TKI+GG +H
Sbjct: 61 LRHLYHRSPAGVGSITKIYGGRKRNGVH 88
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/53 (67%), Positives = 43/53 (81%)
Frame = +3
Query: 255 RKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 413
RKRNGV PSHFCR++ ARKALQ+LE +LVEK DGGR L++ G+RDLDRI
Sbjct: 82 RKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDRI 134
>AE014298-2435|AAN09412.1| 156|Drosophila melanogaster CG4464-PB,
isoform B protein.
Length = 156
Score = 133 bits (321), Expect = 1e-31
Identities = 58/88 (65%), Positives = 71/88 (80%)
Frame = +1
Query: 13 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 192
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60
Query: 193 LRHIYIRSPVGVKTVTKIFGGANVMELH 276
LRH+Y RSP GV ++TKI+GG +H
Sbjct: 61 LRHLYHRSPAGVGSITKIYGGRKRNGVH 88
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/53 (67%), Positives = 43/53 (81%)
Frame = +3
Query: 255 RKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 413
RKRNGV PSHFCR++ ARKALQ+LE +LVEK DGGR L++ G+RDLDRI
Sbjct: 82 RKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDRI 134
>AE014298-2434|AAF48633.1| 156|Drosophila melanogaster CG4464-PA,
isoform A protein.
Length = 156
Score = 133 bits (321), Expect = 1e-31
Identities = 58/88 (65%), Positives = 71/88 (80%)
Frame = +1
Query: 13 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 192
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60
Query: 193 LRHIYIRSPVGVKTVTKIFGGANVMELH 276
LRH+Y RSP GV ++TKI+GG +H
Sbjct: 61 LRHLYHRSPAGVGSITKIYGGRKRNGVH 88
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/53 (67%), Positives = 43/53 (81%)
Frame = +3
Query: 255 RKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 413
RKRNGV PSHFCR++ ARKALQ+LE +LVEK DGGR L++ G+RDLDRI
Sbjct: 82 RKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDRI 134
>X73153-1|CAA51677.1| 156|Drosophila melanogaster ribosomal protein
S19 protein.
Length = 156
Score = 132 bits (320), Expect = 2e-31
Identities = 57/88 (64%), Positives = 71/88 (80%)
Frame = +1
Query: 13 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 192
M VTVKD++Q + K VA LKKTGK+KVP+ MD++KTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIIKTAKFKELAPYDPDWFYVRCASI 60
Query: 193 LRHIYIRSPVGVKTVTKIFGGANVMELH 276
LRH+Y RSP GV ++TKI+GG +H
Sbjct: 61 LRHLYHRSPAGVGSITKIYGGRKRNGVH 88
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/53 (67%), Positives = 43/53 (81%)
Frame = +3
Query: 255 RKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 413
RKRNGV PSHFCR++ ARKALQ+LE +LVEK DGGR L++ G+RDLDRI
Sbjct: 82 RKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDRI 134
>AY119257-1|AAM51117.1| 155|Drosophila melanogaster SD22440p
protein.
Length = 155
Score = 103 bits (248), Expect = 1e-22
Identities = 44/81 (54%), Positives = 59/81 (72%)
Frame = +1
Query: 13 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 192
M VTVK+++Q + K +AA LKK+GK+ VPE +KT +FKE AP D DWFY RCA+I
Sbjct: 1 MPGVTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASI 60
Query: 193 LRHIYIRSPVGVKTVTKIFGG 255
+RH+Y+RSP GV TK++ G
Sbjct: 61 MRHLYLRSPAGVGAFTKVYSG 81
Score = 71.7 bits (168), Expect = 5e-13
Identities = 35/53 (66%), Positives = 40/53 (75%)
Frame = +3
Query: 255 RKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 413
RKRNGV PS CRSS RKALQ+LEA +VE+ DGGR LT QG+R+LDRI
Sbjct: 82 RKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGGRKLTPQGQRNLDRI 134
>AE014297-3411|AAN13960.1| 155|Drosophila melanogaster CG5338-PB
protein.
Length = 155
Score = 103 bits (248), Expect = 1e-22
Identities = 44/81 (54%), Positives = 59/81 (72%)
Frame = +1
Query: 13 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 192
M VTVK+++Q + K +AA LKK+GK+ VPE +KT +FKE AP D DWFY RCA+I
Sbjct: 1 MPGVTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASI 60
Query: 193 LRHIYIRSPVGVKTVTKIFGG 255
+RH+Y+RSP GV TK++ G
Sbjct: 61 MRHLYLRSPAGVGAFTKVYSG 81
Score = 71.7 bits (168), Expect = 5e-13
Identities = 35/53 (66%), Positives = 40/53 (75%)
Frame = +3
Query: 255 RKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 413
RKRNGV PS CRSS RKALQ+LEA +VE+ DGGR LT QG+R+LDRI
Sbjct: 82 RKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGGRKLTPQGQRNLDRI 134
>AY061282-1|AAL28830.1| 378|Drosophila melanogaster LD20087p
protein.
Length = 378
Score = 28.3 bits (60), Expect = 6.2
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Frame = -3
Query: 447 PAAWPLDEPGQRFCQGLVYLVW*ECDHRPELSQQASM--PPTIAKPCVQYCLMTCRNVKV 274
P P +EP QR GL + D++ + + + PP I CL C VK+
Sbjct: 139 PVKLPREEPAQRISFGLRHCAVLTQDNKIYVFGRLRIMDPPPIELDITATCLHRCNTVKI 198
Query: 273 *LHYVCATKDLGDSLDSN----R*ANVNMTKDGSTTHI 172
+H + + S N + A+++ T GST I
Sbjct: 199 QVHNPNELRIVSISSGQNHMVLKCADLSETGGGSTKRI 236
>AE014134-264|AAF51367.2| 378|Drosophila melanogaster CG7420-PA
protein.
Length = 378
Score = 28.3 bits (60), Expect = 6.2
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Frame = -3
Query: 447 PAAWPLDEPGQRFCQGLVYLVW*ECDHRPELSQQASM--PPTIAKPCVQYCLMTCRNVKV 274
P P +EP QR GL + D++ + + + PP I CL C VK+
Sbjct: 139 PVKLPREEPAQRISFGLRHCAVLTQDNKIYVFGRLRIMDPPPIELDITATCLHRCNTVKI 198
Query: 273 *LHYVCATKDLGDSLDSN----R*ANVNMTKDGSTTHI 172
+H + + S N + A+++ T GST I
Sbjct: 199 QVHNPNELRIVSISSGQNHMVLKCADLSETGGGSTKRI 236
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,795,356
Number of Sequences: 53049
Number of extensions: 449881
Number of successful extensions: 1030
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1784022528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -