Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30467
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...   173   2e-45
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    24   1.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    24   1.4  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   3.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.2  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   3.2  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   3.2  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   7.4  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   7.4  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    21   9.8  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    21   9.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.8  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    21   9.8  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score =  173 bits (420), Expect = 2e-45
 Identities = 82/92 (89%), Positives = 85/92 (92%)
 Frame = +2

Query: 257 LLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNIS 436
           LLFVPRR PFDLFENKKRKNNIKLYVRRVFIMDNCE+LIPEYLNFI+GVVDSEDLPLNIS
Sbjct: 329 LLFVPRRVPFDLFENKKRKNNIKLYVRRVFIMDNCEELIPEYLNFIKGVVDSEDLPLNIS 388

Query: 437 REMLQQNKILKVIRKNLVKKCLELLKNWQRTK 532
           REMLQQNKILKVIRKNLVKKCLEL +     K
Sbjct: 389 REMLQQNKILKVIRKNLVKKCLELFEELAEDK 420



 Score =  130 bits (315), Expect = 8e-33
 Identities = 59/66 (89%), Positives = 64/66 (96%)
 Frame = +1

Query: 511 EELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSLKEYVSRM 690
           EELAEDK+ YKK+YEQFSKN+KLGIHEDSQNRAKLSELLRYHTSASGDEACSLK+YVSR+
Sbjct: 414 EELAEDKDGYKKFYEQFSKNIKLGIHEDSQNRAKLSELLRYHTSASGDEACSLKDYVSRI 473

Query: 691 KENQKH 708
           K NQKH
Sbjct: 474 KPNQKH 479



 Score =  108 bits (259), Expect = 5e-26
 Identities = 46/49 (93%), Positives = 49/49 (100%)
 Frame = +3

Query: 108 LNKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFR 254
           LNKTKPIWTRNADDI+Q+EYG+FYKSLTNDWEDHLAVKHFSVEGQLEFR
Sbjct: 279 LNKTKPIWTRNADDISQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFR 327


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +2

Query: 293 FENKKRKNNIKLYVRRVFI 349
           +EN++ ++ I L+VR VF+
Sbjct: 125 YENQRTRSRIHLFVRYVFV 143


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
 Frame = +2

Query: 236 RSVRVPTLLFVPR-----RAPFDLFENKKRKNNIKLYVRRVFIMDNCED 367
           + VR PT     R     + PFD+F N     N+ + VR   ++ N ++
Sbjct: 635 QGVRSPTFHLTVRNTSIIKIPFDVFRNMLPVRNVSVDVRDNILLKNLQN 683


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 12/67 (17%)
 Frame = +1

Query: 532 ENYKKYYEQFSKNLKLGIHED----------SQNRAKLSELLRYHTSASGDEACSLKEY- 678
           +NY + Y++  +N+ L  HE+           +N+ +L     YH  AS     S  EY 
Sbjct: 101 QNYNEPYQRTHENMLLRHHEEVADGHQHHFLHENKYQLEVDSGYHLGASSTPTNSCMEYQ 160

Query: 679 -VSRMKE 696
            + R KE
Sbjct: 161 HLHRYKE 167


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 498 HFLTKFFLITFRILFC 451
           HF   F + T  +LFC
Sbjct: 168 HFFCAFIIFTMHLLFC 183


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 12/67 (17%)
 Frame = +1

Query: 532 ENYKKYYEQFSKNLKLGIHED----------SQNRAKLSELLRYHTSASGDEACSLKEY- 678
           +NY + Y++  +N+ L  HE+           +N+ +L     YH  AS     S  EY 
Sbjct: 101 QNYNEPYQRTHENMLLRHHEEVADGHQHHFLHENKYQLEVDSGYHLGASSTPTNSCMEYQ 160

Query: 679 -VSRMKE 696
            + R KE
Sbjct: 161 HLHRYKE 167


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 12/67 (17%)
 Frame = +1

Query: 532 ENYKKYYEQFSKNLKLGIHED----------SQNRAKLSELLRYHTSASGDEACSLKEY- 678
           +NY + Y++  +N+ L  HE+           +N+ +L     YH  AS     S  EY 
Sbjct: 101 QNYNEPYQRTHENMLLRHHEEVADGHQHHFLHENKYQLEVDSGYHLGASSTPTNSCMEYQ 160

Query: 679 -VSRMKE 696
            + R KE
Sbjct: 161 HLHRYKE 167


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 541 KKYYEQFSKNLKL 579
           KKY+ +F  NLKL
Sbjct: 77  KKYWSEFLANLKL 89


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 16/68 (23%), Positives = 27/68 (39%)
 Frame = +1

Query: 493 KMPRTIEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSLK 672
           K  R +    ++K +   Y+E+  KN +         RAK  E +    +    E C LK
Sbjct: 120 KNMRRLSTTTQNKNDDPSYWEKRRKNNEAAKRSRDARRAKEDE-IAIRCAFLERENCHLK 178

Query: 673 EYVSRMKE 696
                +K+
Sbjct: 179 FVTDTLKK 186


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 180 KSLTNDWEDHLAVKHFSVEGQLEFRHY 260
           K   +DW+  ++V     E Q ++ HY
Sbjct: 92  KERNSDWQQLISVYDPKGEYQTQYAHY 118


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +2

Query: 437 REMLQQNKILKVIRKNLVKKCLELLKNW 520
           +EM Q  K+L  ++KN  K+  ++L  +
Sbjct: 83  QEMKQIQKVLAFVQKNYPKEWNKILHQY 110


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = +3

Query: 273 VVHLLTCLKTRSARTISSCMYEEFSSWTTVRISSQSTLTSLEV 401
           + HL    K R+ +  S CMY  F     ++ + + +  S E+
Sbjct: 655 IAHLKDKKKIRAKKRWSQCMYMYFLLGFRLQANDELSAHSKEI 697


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = +3

Query: 273 VVHLLTCLKTRSARTISSCMYEEFSSWTTVRISSQSTLTSLEV 401
           + HL    K R+ +  S CMY  F     ++ + + +  S E+
Sbjct: 655 IAHLKDKKKIRAKKRWSQCMYMYFLLGFRLQANDELSAHSKEI 697


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 180 KSLTNDWEDHLAVKHFSVEGQLEFRHY 260
           K   +DW+  ++V     E Q ++ HY
Sbjct: 92  KERNSDWQQLISVYDPKGEYQTQYAHY 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,916
Number of Sequences: 336
Number of extensions: 2920
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)