Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30467
(708 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 163 1e-40
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 118 4e-27
U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical p... 79 4e-15
U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical p... 79 4e-15
AY741200-1|AAU89102.1| 596|Caenorhabditis elegans STE20-like se... 36 0.038
AL132898-15|CAC14417.2| 596|Caenorhabditis elegans Hypothetical... 36 0.038
AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical... 29 2.5
Z54238-9|CAL90890.1| 84|Caenorhabditis elegans Hypothetical pr... 29 3.3
X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein. 28 5.7
U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of l... 28 5.7
U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of l... 28 5.7
U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of l... 28 5.7
AC098856-7|AAL27253.2| 155|Caenorhabditis elegans Hypothetical ... 28 5.7
Z81130-5|CAB03420.1| 361|Caenorhabditis elegans Hypothetical pr... 28 7.5
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 27 9.9
U29614-5|AAA68810.2| 240|Caenorhabditis elegans Hypothetical pr... 27 9.9
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 27 9.9
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 27 9.9
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 27 9.9
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 27 9.9
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 27 9.9
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 163 bits (395), Expect = 1e-40
Identities = 75/85 (88%), Positives = 84/85 (98%)
Frame = +2
Query: 257 LLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNIS 436
LLFVP+RAPFDLFENKK KN+IKLYVRRVFIM+NCE+L+PEYLNFI+GVVDSEDLPLNIS
Sbjct: 311 LLFVPQRAPFDLFENKKSKNSIKLYVRRVFIMENCEELMPEYLNFIKGVVDSEDLPLNIS 370
Query: 437 REMLQQNKILKVIRKNLVKKCLELL 511
REMLQQ+KILKVIRKNLVKKC+EL+
Sbjct: 371 REMLQQSKILKVIRKNLVKKCMELI 395
Score = 107 bits (257), Expect = 8e-24
Identities = 52/70 (74%), Positives = 58/70 (82%)
Frame = +1
Query: 493 KMPRTIEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSLK 672
K I+E+AEDK+N+KK+YEQF KNLKLGIHEDS NR KLS+ LRY TSA GDE SLK
Sbjct: 390 KCMELIDEVAEDKDNFKKFYEQFGKNLKLGIHEDSTNRKKLSDFLRYSTSA-GDEPTSLK 448
Query: 673 EYVSRMKENQ 702
EYVSRMKENQ
Sbjct: 449 EYVSRMKENQ 458
Score = 100 bits (239), Expect = 1e-21
Identities = 42/49 (85%), Positives = 46/49 (93%)
Frame = +3
Query: 108 LNKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFR 254
LNKTKPIWTRN DDI+ +EY +FYKSL+NDWEDHLAVKHFSVEGQLEFR
Sbjct: 261 LNKTKPIWTRNPDDISNEEYAEFYKSLSNDWEDHLAVKHFSVEGQLEFR 309
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 118 bits (284), Expect = 4e-27
Identities = 54/88 (61%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
Frame = +2
Query: 254 TLLFVPRRAPFDLFENK-KRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLN 430
++L+VP+++P D+F+N K NIKLYVRRVFI D+ D++P+YL+FIRG+VDS+DLPLN
Sbjct: 364 SILYVPKKSPNDMFQNYGKVIENIKLYVRRVFITDDFADMLPKYLSFIRGIVDSDDLPLN 423
Query: 431 ISREMLQQNKILKVIRKNLVKKCLELLK 514
+SRE LQQ+K+LKVI+K LV+K L++LK
Sbjct: 424 VSRENLQQHKLLKVIKKKLVRKVLDMLK 451
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +3
Query: 108 LNKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFR 254
+N KPIW R + + +DEY FYKS+T D E+ L+ HFS EG++ FR
Sbjct: 315 VNNVKPIWMRKPNQVEEDEYKQFYKSITKDSEEPLSHVHFSAEGEVSFR 363
Score = 58.8 bits (136), Expect = 4e-09
Identities = 25/59 (42%), Positives = 38/59 (64%)
Frame = +1
Query: 526 DKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSLKEYVSRMKENQ 702
D + ++ +FS N+KLG+ ED NR +L++LLR+ +S D+ +L YV RMKE Q
Sbjct: 454 DGAQFDDFWSEFSTNIKLGVMEDPSNRMRLAKLLRFQSSNDADKTTTLAAYVERMKEKQ 512
>U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical
protein R151.7a protein.
Length = 672
Score = 78.6 bits (185), Expect = 4e-15
Identities = 39/93 (41%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Frame = +2
Query: 242 VRVPTLLFVPRRAPFDL-FENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSED 418
V + +++++P+ L F ++ + LY RRV I + ++LIP YL F+ GVVDSED
Sbjct: 299 VSLRSVIYIPQTQFNQLTFMAQQTMCGLSLYARRVLIKPDAQELIPNYLRFVIGVVDSED 358
Query: 419 LPLNISREMLQQNKILKVIRKNLVKKCLELLKN 517
+PLN+SREMLQ N +L+ +RK + K L L++
Sbjct: 359 IPLNLSREMLQNNPVLRKLRKIITDKILGSLQS 391
>U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical
protein R151.7b protein.
Length = 479
Score = 78.6 bits (185), Expect = 4e-15
Identities = 39/93 (41%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Frame = +2
Query: 242 VRVPTLLFVPRRAPFDL-FENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSED 418
V + +++++P+ L F ++ + LY RRV I + ++LIP YL F+ GVVDSED
Sbjct: 299 VSLRSVIYIPQTQFNQLTFMAQQTMCGLSLYARRVLIKPDAQELIPNYLRFVIGVVDSED 358
Query: 419 LPLNISREMLQQNKILKVIRKNLVKKCLELLKN 517
+PLN+SREMLQ N +L+ +RK + K L L++
Sbjct: 359 IPLNLSREMLQNNPVLRKLRKIITDKILGSLQS 391
>AY741200-1|AAU89102.1| 596|Caenorhabditis elegans STE20-like
serine/threonine kinase protein.
Length = 596
Score = 35.5 bits (78), Expect = 0.038
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 499 PRTIEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDE 657
P T+E AE K+ YK Y + F ++ + +D R SELL+Y G +
Sbjct: 339 PPTLETNAERKDQYKAYGKSFKTLIRDCLQKDPAKRPTASELLKYSFFKKGKD 391
>AL132898-15|CAC14417.2| 596|Caenorhabditis elegans Hypothetical
protein Y59A8B.23 protein.
Length = 596
Score = 35.5 bits (78), Expect = 0.038
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 499 PRTIEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDE 657
P T+E AE K+ YK Y + F ++ + +D R SELL+Y G +
Sbjct: 339 PPTLETNAERKDQYKAYGKSFKTLIRDCLQKDPAKRPTASELLKYSFFKKGKD 391
>AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical
protein Y105E8B.7 protein.
Length = 269
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +2
Query: 470 VIRKNLVKKCLELLKNWQRTKKTTRSIMNNSART 571
V++K++ LEL+K + RTKK S+++N ++
Sbjct: 119 VVQKDVPPAYLELIKKYARTKKRKASLISNDEKS 152
>Z54238-9|CAL90890.1| 84|Caenorhabditis elegans Hypothetical
protein T28C6.10 protein.
Length = 84
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = +2
Query: 362 EDLIPEYLNFIRGVVDSEDLPLNISRE--MLQQNKILKVIRKN--LVKKCLELLKN 517
ED + E LN I+ +D+ L + +E ++ Q+ IL V +N LVKKC L KN
Sbjct: 9 EDQLQEQLNKIKRELDNYKLENFLLKEELIISQSAILFVDDQNKKLVKKCQTLKKN 64
>X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein.
Length = 582
Score = 28.3 bits (60), Expect = 5.7
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +2
Query: 434 SREMLQQNKILKVIRKNLVKKCLELLK 514
+ ++LQ N LK+ ++++ KC E++K
Sbjct: 115 NNDILQDNDYLKIFLESMINKCKEIIK 141
>U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform a protein.
Length = 582
Score = 28.3 bits (60), Expect = 5.7
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +2
Query: 434 SREMLQQNKILKVIRKNLVKKCLELLK 514
+ ++LQ N LK+ ++++ KC E++K
Sbjct: 115 NNDILQDNDYLKIFLESMINKCKEIIK 141
>U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform b protein.
Length = 565
Score = 28.3 bits (60), Expect = 5.7
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +2
Query: 434 SREMLQQNKILKVIRKNLVKKCLELLK 514
+ ++LQ N LK+ ++++ KC E++K
Sbjct: 98 NNDILQDNDYLKIFLESMINKCKEIIK 124
>U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform c protein.
Length = 523
Score = 28.3 bits (60), Expect = 5.7
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +2
Query: 434 SREMLQQNKILKVIRKNLVKKCLELLK 514
+ ++LQ N LK+ ++++ KC E++K
Sbjct: 98 NNDILQDNDYLKIFLESMINKCKEIIK 124
>AC098856-7|AAL27253.2| 155|Caenorhabditis elegans Hypothetical
protein Y37F4.8 protein.
Length = 155
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 234 EGQLEFRHYFLCHVVHLLTCLKT 302
+GQ EFRH L V+ LTCL T
Sbjct: 133 QGQWEFRHSKLILTVNSLTCLST 155
>Z81130-5|CAB03420.1| 361|Caenorhabditis elegans Hypothetical
protein T23G11.7a protein.
Length = 361
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +2
Query: 269 PRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNISREML 448
P FD K + +I+L + N D + EY++ GVV++ NIS E+
Sbjct: 41 PVETTFDEISWKLLQTSIRLEKDHI----NDRDSLREYIDEPGGVVNNCQRAQNISMEIE 96
Query: 449 QQNKILKVIRKNLVK 493
Q+N + +R+ + K
Sbjct: 97 QKNVSCEKLREKIAK 111
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +1
Query: 493 KMPRTIEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSLK 672
K+ +T L +D E++ ++Y+Q++ LKL E+ + + L + + + +K
Sbjct: 226 KVGQTFVRLEKDFESHVEFYKQYADTLKL--LEEPEIKRFFEGLSAKNDAGASSFVDHVK 283
Query: 673 EYVSRMKENQKH 708
E RM + Q +
Sbjct: 284 EIADRMVQYQNY 295
>U29614-5|AAA68810.2| 240|Caenorhabditis elegans Hypothetical
protein F18E9.4 protein.
Length = 240
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +2
Query: 215 SQTLLR*RSVRVPTLLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLN 388
S T + R+ RVP + +P+++ D + +R+ ++ R VF + N +L+ LN
Sbjct: 131 SATTEKVRTTRVPFIYEIPKKSFDDPLSSVEREKDMMKLKRDVFRLRNEMNLVKALLN 188
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +1
Query: 493 KMPRTIEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSLK 672
K+ +T L +D E++ ++Y+Q++ LKL E+ + + L + + + +K
Sbjct: 226 KVGQTFVRLEKDFESHVEFYKQYADTLKL--LEEPEIKRFFEGLSAKNDAGASSFVDHVK 283
Query: 673 EYVSRMKENQKH 708
E RM + Q +
Sbjct: 284 EIADRMVQYQNY 295
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +1
Query: 493 KMPRTIEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSLK 672
K+ +T L +D E++ ++Y+Q++ LKL E+ + + L + + + +K
Sbjct: 226 KVGQTFVRLEKDFESHVEFYKQYADTLKL--LEEPEIKRFFEGLSAKNDAGASSFVDHVK 283
Query: 673 EYVSRMKENQKH 708
E RM + Q +
Sbjct: 284 EIADRMVQYQNY 295
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +1
Query: 493 KMPRTIEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSLK 672
K+ +T L +D E++ ++Y+Q++ LKL E+ + + L + + + +K
Sbjct: 226 KVGQTFVRLEKDFESHVEFYKQYADTLKL--LEEPEIKRFFEGLSAKNDAGASSFVDHVK 283
Query: 673 EYVSRMKENQKH 708
E RM + Q +
Sbjct: 284 EIADRMVQYQNY 295
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +1
Query: 493 KMPRTIEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSLK 672
K+ +T L +D E++ ++Y+Q++ LKL E+ + + L + + + +K
Sbjct: 226 KVGQTFVRLEKDFESHVEFYKQYADTLKL--LEEPEIKRFFEGLSAKNDAGASSFVDHVK 283
Query: 673 EYVSRMKENQKH 708
E RM + Q +
Sbjct: 284 EIADRMVQYQNY 295
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +1
Query: 493 KMPRTIEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSLK 672
K+ +T L +D E++ ++Y+Q++ LKL E+ + + L + + + +K
Sbjct: 226 KVGQTFVRLEKDFESHVEFYKQYADTLKL--LEEPEIKRFFEGLSAKNDAGASSFVDHVK 283
Query: 673 EYVSRMKENQKH 708
E RM + Q +
Sbjct: 284 EIADRMVQYQNY 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,163,918
Number of Sequences: 27780
Number of extensions: 277921
Number of successful extensions: 1045
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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