Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30467
(708 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearl... 159 1e-39
At5g56010.1 68418.m06989 heat shock protein, putative strong sim... 159 1e-39
At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearl... 158 3e-39
At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / hea... 156 2e-38
At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata format... 108 4e-24
At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata format... 108 4e-24
At2g04030.2 68415.m00372 heat shock protein, putative strong sim... 91 5e-19
At2g04030.1 68415.m00371 heat shock protein, putative strong sim... 91 5e-19
At3g07770.1 68416.m00947 heat shock protein-related strong simil... 91 7e-19
At3g51880.1 68416.m05689 high mobility group protein alpha (HMGa... 33 0.25
At5g20320.1 68418.m02418 DEAD/DEAH box helicase, putative simila... 31 0.57
At3g50660.1 68416.m05541 steroid 22-alpha-hydroxylase (CYP90B1) ... 30 1.3
At3g51880.2 68416.m05690 high mobility group protein alpha (HMGa... 29 2.3
At3g19880.1 68416.m02517 F-box family protein contains Pfam prof... 29 3.0
At2g01520.1 68415.m00076 major latex protein-related / MLP-relat... 28 7.0
At5g54660.1 68418.m06806 heat shock protein-related contains wea... 27 9.2
At5g29602.1 68418.m03638 hypothetical protein 27 9.2
At5g25780.1 68418.m03060 eukaryotic translation initiation facto... 27 9.2
At3g57590.1 68416.m06415 F-box family protein contains F-box dom... 27 9.2
At3g12980.1 68416.m01617 histone acetyltransferase 5 (HAC5) iden... 27 9.2
>At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearly
identical to SP|P55737 Heat shock protein 81-2 (HSP81-2)
{Arabidopsis thaliana}
Length = 699
Score = 159 bits (387), Expect = 1e-39
Identities = 72/84 (85%), Positives = 80/84 (95%)
Frame = +2
Query: 257 LLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNIS 436
+LFVP+RAPFDLF+ KK+ NNIKLYVRRVFIMDNCED+IPEYL F++G+VDSEDLPLNIS
Sbjct: 311 ILFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCEDIIPEYLGFVKGIVDSEDLPLNIS 370
Query: 437 REMLQQNKILKVIRKNLVKKCLEL 508
RE LQQNKILKVIRKNLVKKCLEL
Sbjct: 371 RETLQQNKILKVIRKNLVKKCLEL 394
Score = 104 bits (250), Expect = 5e-23
Identities = 46/63 (73%), Positives = 56/63 (88%)
Frame = +1
Query: 514 ELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSLKEYVSRMK 693
E+AE+KE+Y K+YE FSKNLKLGIHEDSQNR K++ELLRYH++ SGDE SLK+YV+RMK
Sbjct: 397 EIAENKEDYNKFYEAFSKNLKLGIHEDSQNRTKIAELLRYHSTKSGDELTSLKDYVTRMK 456
Query: 694 ENQ 702
E Q
Sbjct: 457 EGQ 459
Score = 84.2 bits (199), Expect = 8e-17
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +3
Query: 108 LNKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFR 254
+NK KPIW R ++I ++EY FYKSL+NDWE+HLAVKHFSVEGQLEF+
Sbjct: 261 VNKQKPIWMRKPEEINKEEYAAFYKSLSNDWEEHLAVKHFSVEGQLEFK 309
>At5g56010.1 68418.m06989 heat shock protein, putative strong
similarity to SP|P55737 Heat shock protein 81-2
(HSP81-2) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 699
Score = 159 bits (387), Expect = 1e-39
Identities = 72/84 (85%), Positives = 80/84 (95%)
Frame = +2
Query: 257 LLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNIS 436
+LFVP+RAPFDLF+ KK+ NNIKLYVRRVFIMDNCED+IPEYL F++G+VDSEDLPLNIS
Sbjct: 311 ILFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCEDIIPEYLGFVKGIVDSEDLPLNIS 370
Query: 437 REMLQQNKILKVIRKNLVKKCLEL 508
RE LQQNKILKVIRKNLVKKCLEL
Sbjct: 371 RETLQQNKILKVIRKNLVKKCLEL 394
Score = 104 bits (250), Expect = 5e-23
Identities = 46/63 (73%), Positives = 56/63 (88%)
Frame = +1
Query: 514 ELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSLKEYVSRMK 693
E+AE+KE+Y K+YE FSKNLKLGIHEDSQNR K++ELLRYH++ SGDE SLK+YV+RMK
Sbjct: 397 EIAENKEDYNKFYEAFSKNLKLGIHEDSQNRTKIAELLRYHSTKSGDELTSLKDYVTRMK 456
Query: 694 ENQ 702
E Q
Sbjct: 457 EGQ 459
Score = 84.2 bits (199), Expect = 8e-17
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +3
Query: 108 LNKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFR 254
+NK KPIW R ++I ++EY FYKSL+NDWE+HLAVKHFSVEGQLEF+
Sbjct: 261 VNKQKPIWMRKPEEINKEEYAAFYKSLSNDWEEHLAVKHFSVEGQLEFK 309
>At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearly
identical to heat shock protein hsp81.4 [Arabidopsis
thaliana] GI:1906828; contains Pfam profiles PF02518:
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like
domain protein, PF00183: Hsp90 protein
Length = 699
Score = 158 bits (384), Expect = 3e-39
Identities = 71/84 (84%), Positives = 80/84 (95%)
Frame = +2
Query: 257 LLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNIS 436
+LFVP+RAPFDLF+ KK+ NNIKLYVRRVFIMDNCED+IP+YL F++G+VDSEDLPLNIS
Sbjct: 311 ILFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCEDIIPDYLGFVKGIVDSEDLPLNIS 370
Query: 437 REMLQQNKILKVIRKNLVKKCLEL 508
RE LQQNKILKVIRKNLVKKCLEL
Sbjct: 371 RETLQQNKILKVIRKNLVKKCLEL 394
Score = 104 bits (250), Expect = 5e-23
Identities = 46/63 (73%), Positives = 56/63 (88%)
Frame = +1
Query: 514 ELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSLKEYVSRMK 693
E+AE+KE+Y K+YE FSKNLKLGIHEDSQNR K++ELLRYH++ SGDE SLK+YV+RMK
Sbjct: 397 EIAENKEDYNKFYEAFSKNLKLGIHEDSQNRTKIAELLRYHSTKSGDELTSLKDYVTRMK 456
Query: 694 ENQ 702
E Q
Sbjct: 457 EGQ 459
Score = 84.2 bits (199), Expect = 8e-17
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +3
Query: 108 LNKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFR 254
+NK KPIW R ++I ++EY FYKSL+NDWE+HLAVKHFSVEGQLEF+
Sbjct: 261 VNKQKPIWMRKPEEINKEEYAAFYKSLSNDWEEHLAVKHFSVEGQLEFK 309
>At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / heat
shock protein 83 (HSP83) nearly identical to SP|P27323
Heat shock protein 81-1 (HSP81-1) (Heat shock protein
83) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 705
Score = 156 bits (378), Expect = 2e-38
Identities = 70/93 (75%), Positives = 83/93 (89%)
Frame = +2
Query: 257 LLFVPRRAPFDLFENKKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSEDLPLNIS 436
+LFVP+RAPFDLF+ +K+ NNIKLYVRRVFIMDNCE+LIPEYL+F++GVVDS+DLPLNIS
Sbjct: 317 ILFVPKRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEYLSFVKGVVDSDDLPLNIS 376
Query: 437 REMLQQNKILKVIRKNLVKKCLELLKNWQRTKK 535
RE LQQNKILKVIRKNLVKKC+E+ K+
Sbjct: 377 RETLQQNKILKVIRKNLVKKCIEMFNEIAENKE 409
Score = 103 bits (247), Expect = 1e-22
Identities = 45/64 (70%), Positives = 56/64 (87%)
Frame = +1
Query: 514 ELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSLKEYVSRMK 693
E+AE+KE+Y K+YE FSKNLKLGIHEDSQNR K+++LLRYH++ SGDE S K+YV+RMK
Sbjct: 403 EIAENKEDYTKFYEAFSKNLKLGIHEDSQNRGKIADLLRYHSTKSGDEMTSFKDYVTRMK 462
Query: 694 ENQK 705
E QK
Sbjct: 463 EGQK 466
Score = 89.8 bits (213), Expect = 2e-18
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = +3
Query: 108 LNKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFR 254
+NK KPIW R ++IT++EY FYKSLTNDWEDHLAVKHFSVEGQLEF+
Sbjct: 267 INKQKPIWLRKPEEITKEEYAAFYKSLTNDWEDHLAVKHFSVEGQLEFK 315
>At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 108 bits (259), Expect = 4e-24
Identities = 48/93 (51%), Positives = 72/93 (77%), Gaps = 2/93 (2%)
Frame = +2
Query: 242 VRVPTLLFVPRRAPFDLFEN--KKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSE 415
V +L+VP +AP DL+E+ K N+KLYVRRVFI D ++L+P+YL+F++G+VDS+
Sbjct: 388 VEFKAVLYVPPKAPHDLYESYYNSNKANLKLYVRRVFISDEFDELLPKYLSFLKGLVDSD 447
Query: 416 DLPLNISREMLQQNKILKVIRKNLVKKCLELLK 514
LPLN+SREMLQQ+ LK I+K L++K L++++
Sbjct: 448 TLPLNVSREMLQQHSSLKTIKKKLIRKALDMIR 480
Score = 64.5 bits (150), Expect = 7e-11
Identities = 28/61 (45%), Positives = 44/61 (72%)
Frame = +1
Query: 523 EDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSLKEYVSRMKENQ 702
E K Y K++ +F K++KLGI ED+ NR +L++LLR+ T+ S + SL +Y+ RMK++Q
Sbjct: 506 EKKGQYTKFWNEFGKSVKLGIIEDAANRNRLAKLLRFETTKSDGKLTSLDQYIKRMKKSQ 565
Query: 703 K 705
K
Sbjct: 566 K 566
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +3
Query: 108 LNKTKPIWTRNADDITQDEYGDFYKSLTNDWEDH--LAVKHFSVEGQLEFR 254
LN K IW R+ ++T++EY FY SL+ D+ D +A HF+ EG +EF+
Sbjct: 341 LNDVKAIWLRSPKEVTEEEYTKFYHSLSKDFTDEKPMAWSHFNAEGDVEFK 391
>At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 108 bits (259), Expect = 4e-24
Identities = 48/93 (51%), Positives = 72/93 (77%), Gaps = 2/93 (2%)
Frame = +2
Query: 242 VRVPTLLFVPRRAPFDLFEN--KKRKNNIKLYVRRVFIMDNCEDLIPEYLNFIRGVVDSE 415
V +L+VP +AP DL+E+ K N+KLYVRRVFI D ++L+P+YL+F++G+VDS+
Sbjct: 388 VEFKAVLYVPPKAPHDLYESYYNSNKANLKLYVRRVFISDEFDELLPKYLSFLKGLVDSD 447
Query: 416 DLPLNISREMLQQNKILKVIRKNLVKKCLELLK 514
LPLN+SREMLQQ+ LK I+K L++K L++++
Sbjct: 448 TLPLNVSREMLQQHSSLKTIKKKLIRKALDMIR 480
Score = 64.5 bits (150), Expect = 7e-11
Identities = 28/61 (45%), Positives = 44/61 (72%)
Frame = +1
Query: 523 EDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSLKEYVSRMKENQ 702
E K Y K++ +F K++KLGI ED+ NR +L++LLR+ T+ S + SL +Y+ RMK++Q
Sbjct: 506 EKKGQYTKFWNEFGKSVKLGIIEDAANRNRLAKLLRFETTKSDGKLTSLDQYIKRMKKSQ 565
Query: 703 K 705
K
Sbjct: 566 K 566
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +3
Query: 108 LNKTKPIWTRNADDITQDEYGDFYKSLTNDWEDH--LAVKHFSVEGQLEFR 254
LN K IW R+ ++T++EY FY SL+ D+ D +A HF+ EG +EF+
Sbjct: 341 LNDVKAIWLRSPKEVTEEEYTKFYHSLSKDFTDEKPMAWSHFNAEGDVEFK 391
>At2g04030.2 68415.m00372 heat shock protein, putative strong
similarity to heat shock protein [Arabidopsis thaliana]
GI:1906830; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 777
Score = 91.5 bits (217), Expect = 5e-19
Identities = 42/94 (44%), Positives = 72/94 (76%), Gaps = 3/94 (3%)
Frame = +2
Query: 242 VRVPTLLFVPRRAPFDLFE--NKKRKNNIKLYVRRVFIMDNCE-DLIPEYLNFIRGVVDS 412
V ++L++P P + + N K KN I+LYV+RVFI D+ + +L P YL+F++GVVDS
Sbjct: 374 VEFRSILYIPGMGPLNNEDVTNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDS 432
Query: 413 EDLPLNISREMLQQNKILKVIRKNLVKKCLELLK 514
+DLPLN+SRE+LQ+++I++++RK L++K ++++
Sbjct: 433 DDLPLNVSREILQESRIVRIMRKRLIRKTFDMIQ 466
Score = 60.1 bits (139), Expect = 1e-09
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +3
Query: 111 NKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFR 254
N+TKP+W RN+ ++ + EY +FYK N++ D LA HF+ EG++EFR
Sbjct: 330 NETKPLWMRNSKEVEKGEYNEFYKKAFNEFLDPLAHTHFTTEGEVEFR 377
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/66 (42%), Positives = 45/66 (68%)
Frame = +1
Query: 508 IEELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSLKEYVSR 687
I+E++E EN +K++E F + LKLG ED+ N +++ LLR+ +S + +E SL +Y+
Sbjct: 465 IQEISES-ENKEKFWENFGRFLKLGCIEDTGNHKRITPLLRFFSSKNEEELTSLDDYIEN 523
Query: 688 MKENQK 705
M ENQK
Sbjct: 524 MGENQK 529
>At2g04030.1 68415.m00371 heat shock protein, putative strong
similarity to heat shock protein [Arabidopsis thaliana]
GI:1906830; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 780
Score = 91.5 bits (217), Expect = 5e-19
Identities = 42/94 (44%), Positives = 72/94 (76%), Gaps = 3/94 (3%)
Frame = +2
Query: 242 VRVPTLLFVPRRAPFDLFE--NKKRKNNIKLYVRRVFIMDNCE-DLIPEYLNFIRGVVDS 412
V ++L++P P + + N K KN I+LYV+RVFI D+ + +L P YL+F++GVVDS
Sbjct: 374 VEFRSILYIPGMGPLNNEDVTNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDS 432
Query: 413 EDLPLNISREMLQQNKILKVIRKNLVKKCLELLK 514
+DLPLN+SRE+LQ+++I++++RK L++K ++++
Sbjct: 433 DDLPLNVSREILQESRIVRIMRKRLIRKTFDMIQ 466
Score = 64.5 bits (150), Expect = 7e-11
Identities = 28/62 (45%), Positives = 44/62 (70%)
Frame = +1
Query: 520 AEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSLKEYVSRMKEN 699
+E+KE+YKK++E F + LKLG ED+ N +++ LLR+ +S + +E SL +Y+ M EN
Sbjct: 471 SENKEDYKKFWENFGRFLKLGCIEDTGNHKRITPLLRFFSSKNEEELTSLDDYIENMGEN 530
Query: 700 QK 705
QK
Sbjct: 531 QK 532
Score = 60.1 bits (139), Expect = 1e-09
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +3
Query: 111 NKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFR 254
N+TKP+W RN+ ++ + EY +FYK N++ D LA HF+ EG++EFR
Sbjct: 330 NETKPLWMRNSKEVEKGEYNEFYKKAFNEFLDPLAHTHFTTEGEVEFR 377
>At3g07770.1 68416.m00947 heat shock protein-related strong
similarity to heat-shock protein [Secale cereale]
GI:556673; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 803
Score = 91.1 bits (216), Expect = 7e-19
Identities = 44/93 (47%), Positives = 71/93 (76%), Gaps = 3/93 (3%)
Frame = +2
Query: 242 VRVPTLLFVPRRAPF--DLFENKKRKNNIKLYVRRVFIMDNCE-DLIPEYLNFIRGVVDS 412
V ++L+VP +P D N+K KN I+LYV+RVFI D+ + +L P YL+F++GVVDS
Sbjct: 397 VEFRSILYVPPVSPSGKDDIVNQKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDS 455
Query: 413 EDLPLNISREMLQQNKILKVIRKNLVKKCLELL 511
DLPLN+SRE+LQ+++I+++++K LV+K +++
Sbjct: 456 HDLPLNVSREILQESRIVRIMKKRLVRKAFDMI 488
Score = 64.9 bits (151), Expect = 5e-11
Identities = 28/63 (44%), Positives = 45/63 (71%)
Frame = +1
Query: 517 LAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSLKEYVSRMKE 696
L+E++E+Y+K+++ F K+LKLG ED +N +++ LLR+ +S S ++ SL EYV MK
Sbjct: 493 LSENREDYEKFWDNFGKHLKLGCIEDRENHKRIAPLLRFFSSQSENDMISLDEYVENMKP 552
Query: 697 NQK 705
QK
Sbjct: 553 EQK 555
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +3
Query: 111 NKTKPIWTRNADDITQDEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFR 254
N+T+PIW RN ++T EY +FY+ N++ D LA HF+ EG++EFR
Sbjct: 353 NETQPIWLRNPKEVTTAEYNEFYRKAFNEYLDPLASSHFTTEGEVEFR 400
>At3g51880.1 68416.m05689 high mobility group protein alpha
(HMGalpha) / HMG protein alpha nearly identical to HMG
protein (HMGalpha) [Arabidopsis thaliana] GI:2832357;
contains Pfam profile PF00505: HMG (high mobility group)
box
Length = 178
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/65 (27%), Positives = 36/65 (55%)
Frame = +1
Query: 511 EELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSELLRYHTSASGDEACSLKEYVSRM 690
E+ A+ K Y+K + ++KNL+ G E ++R+++++ ASG+E KE
Sbjct: 105 EKAAKRKAEYEKQMDAYNKNLEEGSDESEKSRSEIND----EDEASGEEELLEKEAAGDD 160
Query: 691 KENQK 705
+E ++
Sbjct: 161 EEEEE 165
>At5g20320.1 68418.m02418 DEAD/DEAH box helicase, putative similar
to CAF protein [Arabidopsis thaliana] GI:6102610;
contains Pfam profiles PF00270: DEAD/DEAH box helicase,
PF00271: Helicase conserved C-terminal domain, PF03368:
Domain of unknown function, PF00636: RNase3 domain,
PF00035: Double-stranded RNA binding motif
Length = 1676
Score = 31.5 bits (68), Expect = 0.57
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 434 SREMLQQNKILKVIRKNLVKKCLELLKNWQRTKKTTRSIMNNSART*NWVS--MKTLKTG 607
SR+++Q KIL V R KC+ + N T +T I+NN +W S + L +G
Sbjct: 493 SRKLVQLIKILSVFRLEPHMKCI-IFVNRIVTARTLSCILNNLELLRSWKSDFLVGLSSG 551
Query: 608 LSSLS 622
L S+S
Sbjct: 552 LKSMS 556
>At3g50660.1 68416.m05541 steroid 22-alpha-hydroxylase (CYP90B1)
(DWF4) identical to gi:2935342
Length = 513
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Frame = +2
Query: 296 ENKKRKNNIKLYVRRVFIMD----NCEDLIPEYLNFIRGVVDSE-DLPLNISREMLQQN- 457
+++ +K L + + MD E L EY+ F++GVV + +LP + LQ
Sbjct: 177 QDEAKKFTFNLMAKHIMSMDPGEEETEQLKKEYVTFMKGVVSAPLNLPGTAYHKALQSRA 236
Query: 458 KILKVIRKNLVKKCLELLKNWQRTKK 535
ILK I + + ++ L++ + Q ++
Sbjct: 237 TILKFIERKMEERKLDIKEEDQEEEE 262
>At3g51880.2 68416.m05690 high mobility group protein alpha
(HMGalpha) / HMG protein alpha nearly identical to HMG
protein (HMGalpha) [Arabidopsis thaliana] GI:2832357;
contains Pfam profile PF00505: HMG (high mobility group)
box
Length = 185
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/37 (29%), Positives = 25/37 (67%)
Frame = +1
Query: 511 EELAEDKENYKKYYEQFSKNLKLGIHEDSQNRAKLSE 621
E+ A+ K Y+K + ++KNL+ G E ++R+++++
Sbjct: 105 EKAAKRKAEYEKQMDAYNKNLEEGSDESEKSRSEIND 141
>At3g19880.1 68416.m02517 F-box family protein contains Pfam
profile: PF00646 F-box domain
Length = 389
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 497 CLELLKNWQRTKKTTRSIMNNSART*NWVSMKTLKTGLSSLSF-CGTTLQHRVMK 658
C LL R K + I N W++ KT KTG ++ + C H+++K
Sbjct: 93 CAGLLLCVTREKSSRLIIWNPYLGQTRWINTKTTKTGYNTYALGCDNNKNHKILK 147
>At2g01520.1 68415.m00076 major latex protein-related / MLP-related
low similarity to major latex protein {Papaver
somniferum}[GI:169000] contains Pfam profile PF00407:
Pathogenesis-related protein Bet v I family
Length = 151
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 114 KTKPIWTRNADDITQ-DEYGDFYKSLTNDWEDHL 212
K IW + DD+ + Y F KSL D +DH+
Sbjct: 115 KITMIWEKQNDDMPEPSNYMKFVKSLAADMDDHV 148
>At5g54660.1 68418.m06806 heat shock protein-related contains weak
similarity to 17.6 kDa class I heat shock protein (HSP
17.6) (Swiss-Prot:P13853) [Arabidopsis thaliana]
Length = 192
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 227 EVFDCKMVLPIIGKGFVEVSVLILGNVISVSG 132
+ + K +P++GK V+V V I G V+ +SG
Sbjct: 96 QAYVLKSDIPVVGKNNVQVYVDINGRVMEISG 127
>At5g29602.1 68418.m03638 hypothetical protein
Length = 139
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 362 EDLIPEYLNFIRGVVDSEDLPLNISREMLQQNKILKVIRKNLVKKCLELLK 514
ED +P ++ I V N+ +E +Q+ K ++RK + KC+ LK
Sbjct: 60 EDALPR-IDIIANEVSKGKSETNVVKEQIQELKEEALLRKKELHKCIWCLK 109
>At5g25780.1 68418.m03060 eukaryotic translation initiation factor 3
subunit 9, putative / eIF-3 eta, putative / eIF3b,
putative nearly identical to SP|Q9C5Z1 Eukaryotic
translation initiation factor 3 subunit 9 (eIF-3 eta)
(eIF3 p110) (eIF3b) {Arabidopsis thaliana}
Length = 714
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 511 EELAEDKENYKKYYEQFSKNLKLGIHE-DSQNRAKLSE 621
EE+A++ NY K YE +++ L + E D + R L+E
Sbjct: 619 EEIAKNLRNYSKRYEAEDQDVSLLLSEQDREKRRALNE 656
>At3g57590.1 68416.m06415 F-box family protein contains F-box domain
Pfam:PF00646
Length = 404
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 598 QNRAKLSELLRYHTSASGDEACSLKEYVS 684
QNR + S L YHT SGD + + YVS
Sbjct: 73 QNRYEKSSHLDYHTKFSGDVSRFICSYVS 101
>At3g12980.1 68416.m01617 histone acetyltransferase 5 (HAC5)
identical to HAC5 (GI:21105780) [Arabidopsis thaliana];
similar to CREB-binding protein GB:S39162 from [Homo
sapiens]
Length = 1670
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 625 LRYHTSASGDEACSLKEYVSRMKENQK 705
L +H GDEAC + +V KE QK
Sbjct: 672 LIHHYKHCGDEACPVCVFVKNFKEKQK 698
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,262,173
Number of Sequences: 28952
Number of extensions: 251973
Number of successful extensions: 895
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1526202912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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