Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30466
(618 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y10017-1|CAA71124.1| 166|Drosophila melanogaster ribosomal prot... 87 2e-17
Y10015-2|CAA71121.1| 166|Drosophila melanogaster ribosomal prot... 87 2e-17
Y09766-1|CAA70905.1| 166|Drosophila melanogaster ribosomal prot... 87 2e-17
BT021213-1|AAX33361.1| 177|Drosophila melanogaster RH72463p pro... 87 2e-17
BT016128-1|AAV37013.1| 167|Drosophila melanogaster GM06787p pro... 87 2e-17
AE014296-1484|AAF50393.1| 166|Drosophila melanogaster CG6253-PA... 87 2e-17
AE014134-600|AAF51111.1| 181|Drosophila melanogaster CG31952-PA... 29 6.6
AJ001164-1|CAA04568.1| 1668|Drosophila melanogaster Additional s... 28 8.8
AE013599-1902|AAF58239.1| 1669|Drosophila melanogaster CG8787-PA... 28 8.8
>Y10017-1|CAA71124.1| 166|Drosophila melanogaster ribosomal protein
L14 protein.
Length = 166
Score = 86.6 bits (205), Expect = 2e-17
Identities = 37/52 (71%), Positives = 46/52 (88%)
Frame = +2
Query: 98 GPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAFTAP 253
GPLKG+LV++VDVIDQ R LVDGP +GVPRQ+ RLN LHLTK+R+K+ +TAP
Sbjct: 18 GPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYRIKFPYTAP 69
Score = 69.3 bits (162), Expect = 4e-12
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +1
Query: 247 SPYRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRNRARTAVF 426
+P R+VRKAWT++ L +W S W+ K N KR+ + D+DRFKL A+ +RN+ T F
Sbjct: 68 APTRIVRKAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRNKLLTIAF 127
Query: 427 KSLKVKAARAGT 462
+LK + GT
Sbjct: 128 NTLKKRTKADGT 139
>Y10015-2|CAA71121.1| 166|Drosophila melanogaster ribosomal protein
L14 protein.
Length = 166
Score = 86.6 bits (205), Expect = 2e-17
Identities = 37/52 (71%), Positives = 46/52 (88%)
Frame = +2
Query: 98 GPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAFTAP 253
GPLKG+LV++VDVIDQ R LVDGP +GVPRQ+ RLN LHLTK+R+K+ +TAP
Sbjct: 18 GPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYRIKFPYTAP 69
Score = 69.3 bits (162), Expect = 4e-12
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +1
Query: 247 SPYRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRNRARTAVF 426
+P R+VRKAWT++ L +W S W+ K N KR+ + D+DRFKL A+ +RN+ T F
Sbjct: 68 APTRIVRKAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRNKLLTIAF 127
Query: 427 KSLKVKAARAGT 462
+LK + GT
Sbjct: 128 NTLKKRTKADGT 139
>Y09766-1|CAA70905.1| 166|Drosophila melanogaster ribosomal protein
L14 protein.
Length = 166
Score = 86.6 bits (205), Expect = 2e-17
Identities = 37/52 (71%), Positives = 46/52 (88%)
Frame = +2
Query: 98 GPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAFTAP 253
GPLKG+LV++VDVIDQ R LVDGP +GVPRQ+ RLN LHLTK+R+K+ +TAP
Sbjct: 18 GPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYRIKFPYTAP 69
Score = 69.3 bits (162), Expect = 4e-12
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +1
Query: 247 SPYRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRNRARTAVF 426
+P R+VRKAWT++ L +W S W+ K N KR+ + D+DRFKL A+ +RN+ T F
Sbjct: 68 APTRIVRKAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRNKLLTIAF 127
Query: 427 KSLKVKAARAGT 462
+LK + GT
Sbjct: 128 NTLKKRTKADGT 139
>BT021213-1|AAX33361.1| 177|Drosophila melanogaster RH72463p
protein.
Length = 177
Score = 86.6 bits (205), Expect = 2e-17
Identities = 37/52 (71%), Positives = 46/52 (88%)
Frame = +2
Query: 98 GPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAFTAP 253
GPLKG+LV++VDVIDQ R LVDGP +GVPRQ+ RLN LHLTK+R+K+ +TAP
Sbjct: 29 GPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYRIKFPYTAP 80
Score = 69.3 bits (162), Expect = 4e-12
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +1
Query: 247 SPYRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRNRARTAVF 426
+P R+VRKAWT++ L +W S W+ K N KR+ + D+DRFKL A+ +RN+ T F
Sbjct: 79 APTRIVRKAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRNKLLTIAF 138
Query: 427 KSLKVKAARAGT 462
+LK + GT
Sbjct: 139 NTLKKRTKADGT 150
>BT016128-1|AAV37013.1| 167|Drosophila melanogaster GM06787p
protein.
Length = 167
Score = 86.6 bits (205), Expect = 2e-17
Identities = 37/52 (71%), Positives = 46/52 (88%)
Frame = +2
Query: 98 GPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAFTAP 253
GPLKG+LV++VDVIDQ R LVDGP +GVPRQ+ RLN LHLTK+R+K+ +TAP
Sbjct: 19 GPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYRIKFPYTAP 70
Score = 66.9 bits (156), Expect = 2e-11
Identities = 30/72 (41%), Positives = 44/72 (61%)
Frame = +1
Query: 247 SPYRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRNRARTAVF 426
+P R+VRKAW ++ L +W S W+ K N KR+ + D+DRFKL A+ +RN+ T F
Sbjct: 69 APTRIVRKAWIESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRNKLLTIAF 128
Query: 427 KSLKVKAARAGT 462
+LK + GT
Sbjct: 129 NTLKKRTKADGT 140
>AE014296-1484|AAF50393.1| 166|Drosophila melanogaster CG6253-PA
protein.
Length = 166
Score = 86.6 bits (205), Expect = 2e-17
Identities = 37/52 (71%), Positives = 46/52 (88%)
Frame = +2
Query: 98 GPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAFTAP 253
GPLKG+LV++VDVIDQ R LVDGP +GVPRQ+ RLN LHLTK+R+K+ +TAP
Sbjct: 18 GPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYRIKFPYTAP 69
Score = 69.3 bits (162), Expect = 4e-12
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +1
Query: 247 SPYRLVRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAARVKRNRARTAVF 426
+P R+VRKAWT++ L +W S W+ K N KR+ + D+DRFKL A+ +RN+ T F
Sbjct: 68 APTRIVRKAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRNKLLTIAF 127
Query: 427 KSLKVKAARAGT 462
+LK + GT
Sbjct: 128 NTLKKRTKADGT 139
>AE014134-600|AAF51111.1| 181|Drosophila melanogaster CG31952-PA
protein.
Length = 181
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 307 ESQWAQKLANKEKRAQMTDYDRFKLTAARVKRNRARTAVFKSLKVKAARA 456
+S + +A +EK A ++ + K TAA A T+ +++ KAA A
Sbjct: 72 QSASSAAIAAREKAANAAEFTKEKATAAAAAATEAATSAASTVREKAAAA 121
>AJ001164-1|CAA04568.1| 1668|Drosophila melanogaster Additional sex
combs protein.
Length = 1668
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -1
Query: 420 GSPGTVPLNSCSC*LEPIVICHLCALLFVR*LLGPLTFC 304
G+ T N+C+C L +VIC C +G C
Sbjct: 1624 GNEATATANNCACSLNAMVICQQCGAFCHDDCIGAAKLC 1662
>AE013599-1902|AAF58239.1| 1669|Drosophila melanogaster CG8787-PA,
isoform A protein.
Length = 1669
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -1
Query: 420 GSPGTVPLNSCSC*LEPIVICHLCALLFVR*LLGPLTFC 304
G+ T N+C+C L +VIC C +G C
Sbjct: 1625 GNEATATANNCACSLNAMVICQQCGAFCHDDCIGAAKLC 1663
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,041,529
Number of Sequences: 53049
Number of extensions: 540400
Number of successful extensions: 1447
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1447
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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