Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30464
         (826 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   2.2  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    23   2.9  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.9  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   3.9  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   3.9  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   3.9  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    22   6.8  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   6.8  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   6.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   6.8  

>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +3

Query: 648 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYNQPDRLIGQIVS 788
           T H    +++    V  E IY+ CR    I +P  N  D  +  +V+
Sbjct: 35  TEHNYTHNNEMYHSVKEEPIYESCR--FSINQPYLNHFDNSVTPMVN 79


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +3

Query: 183 ARCPQTRPSGVETILSTLSSARPEW 257
           A+C      G+  ++  L   +PEW
Sbjct: 71  AKCNDKHKEGIRKVIHYLVKQKPEW 95


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -1

Query: 460 QRACGFCPKPNLRFPFQWCSDHGHSCW 380
           Q  C +   PN       C+D   SCW
Sbjct: 15  QLECNWSSGPNATLQSSACTDDLSSCW 41


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +3

Query: 183 ARCPQTRPSGVETILSTLSSARPEW 257
           A+C +    GV  +L  L   +P W
Sbjct: 73  AKCNEKHKEGVRKVLHHLIKNKPNW 97


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +1

Query: 385 NYARGHYTIGKEIVDLVLDRIRKLADQCTG 474
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 193 HRQDHRGWRRFFQHFLQRDRSGKHVPR 273
           +R++ +GW+   +H L  ++    VPR
Sbjct: 120 YRENKQGWQNSIRHNLSLNKCFVKVPR 146


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +3

Query: 183 ARCPQTRPSGVETILSTLSSARPEW 257
           A+C +    GV  ++  L   +P W
Sbjct: 72  AKCNEKHKEGVRKVIRHLIKNKPSW 96


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +3

Query: 183 ARCPQTRPSGVETILSTLSSARPEW 257
           A+C +    GV  ++  L   +P W
Sbjct: 73  AKCNEKHKEGVRKVIHHLIENKPNW 97


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +3

Query: 183 ARCPQTRPSGVETILSTLSSARPEW 257
           A+C +    GV  ++  L   +P W
Sbjct: 73  AKCNEKHKEGVRKVIHHLIENKPNW 97


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 726  YGGRCHRWLHC 694
            Y G C R+LHC
Sbjct: 1287 YPGDCTRYLHC 1297


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 520 EPVPHRRSGRSGILADRYT 464
           EPVPH  S   G L   Y+
Sbjct: 77  EPVPHTSSFNMGYLVSPYS 95


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,578
Number of Sequences: 336
Number of extensions: 4558
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)