Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30464
(826 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 170 1e-42
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 170 1e-42
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 170 1e-42
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 170 1e-42
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 169 2e-42
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 169 2e-42
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 163 2e-40
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 105 5e-23
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 103 1e-22
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 103 1e-22
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 102 3e-22
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 101 4e-22
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 101 4e-22
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 99 2e-21
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 99 2e-21
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 98 7e-21
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 69 4e-12
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 69 5e-12
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 30 1.6
At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identica... 30 2.1
At3g10650.1 68416.m01281 expressed protein 29 2.8
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 5.0
At5g52340.1 68418.m06495 exocyst subunit EXO70 family protein st... 28 6.5
At5g40360.1 68418.m04896 myb family transcription factor (MYB115... 28 8.7
At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR... 28 8.7
At3g08850.1 68416.m01029 transducin family protein / WD-40 repea... 28 8.7
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 170 bits (413), Expect = 1e-42
Identities = 77/94 (81%), Positives = 84/94 (89%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 406 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFG 507
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ G
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVG 142
Score = 155 bits (376), Expect = 3e-38
Identities = 70/105 (66%), Positives = 88/105 (83%)
Frame = +3
Query: 510 GTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFM 689
GTGSG SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + +
Sbjct: 144 GTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSIL 203
Query: 690 VDNEAIYDICRRNLDIERPTYNQPDRLIGQIVSSINCFFEEFDGA 824
+DNEAIYDICRR+L+IERPTY +RL+ Q++SS+ FDGA
Sbjct: 204 LDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASL-RFDGA 247
Score = 128 bits (308), Expect = 6e-30
Identities = 51/63 (80%), Positives = 57/63 (90%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 170 bits (413), Expect = 1e-42
Identities = 77/94 (81%), Positives = 84/94 (89%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 406 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFG 507
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ G
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVG 142
Score = 155 bits (376), Expect = 3e-38
Identities = 70/105 (66%), Positives = 88/105 (83%)
Frame = +3
Query: 510 GTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFM 689
GTGSG SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + +
Sbjct: 144 GTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSIL 203
Query: 690 VDNEAIYDICRRNLDIERPTYNQPDRLIGQIVSSINCFFEEFDGA 824
+DNEAIYDICRR+L+IERPTY +RL+ Q++SS+ FDGA
Sbjct: 204 LDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASL-RFDGA 247
Score = 128 bits (308), Expect = 6e-30
Identities = 51/63 (80%), Positives = 57/63 (90%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 170 bits (413), Expect = 1e-42
Identities = 77/94 (81%), Positives = 84/94 (89%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 406 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFG 507
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ G
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVG 142
Score = 155 bits (375), Expect = 4e-38
Identities = 70/105 (66%), Positives = 87/105 (82%)
Frame = +3
Query: 510 GTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFM 689
GTGSG SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + +
Sbjct: 144 GTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSIL 203
Query: 690 VDNEAIYDICRRNLDIERPTYNQPDRLIGQIVSSINCFFEEFDGA 824
+DNEAIYDICRR+L IERPTY +RL+ Q++SS+ FDGA
Sbjct: 204 LDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASL-RFDGA 247
Score = 129 bits (311), Expect = 3e-30
Identities = 51/63 (80%), Positives = 58/63 (92%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 170 bits (413), Expect = 1e-42
Identities = 77/94 (81%), Positives = 84/94 (89%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 406 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFG 507
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ G
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVG 142
Score = 155 bits (375), Expect = 4e-38
Identities = 70/105 (66%), Positives = 87/105 (82%)
Frame = +3
Query: 510 GTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFM 689
GTGSG SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + +
Sbjct: 144 GTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSIL 203
Query: 690 VDNEAIYDICRRNLDIERPTYNQPDRLIGQIVSSINCFFEEFDGA 824
+DNEAIYDICRR+L IERPTY +RL+ Q++SS+ FDGA
Sbjct: 204 LDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASL-RFDGA 247
Score = 129 bits (311), Expect = 3e-30
Identities = 51/63 (80%), Positives = 58/63 (92%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 169 bits (411), Expect = 2e-42
Identities = 75/94 (79%), Positives = 84/94 (89%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 406 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFG 507
T+GKEIVDL LDR+RKLAD CTGLQGFL+F++ G
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVG 142
Score = 160 bits (388), Expect = 1e-39
Identities = 76/105 (72%), Positives = 88/105 (83%)
Frame = +3
Query: 510 GTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFM 689
GTGSG SLL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A +
Sbjct: 144 GTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVL 203
Query: 690 VDNEAIYDICRRNLDIERPTYNQPDRLIGQIVSSINCFFEEFDGA 824
+DNEAIYDICRR+LDIERPTY +RLI QI+SS+ FDGA
Sbjct: 204 LDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSL-RFDGA 247
Score = 110 bits (265), Expect = 9e-25
Identities = 44/63 (69%), Positives = 52/63 (82%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETG
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 169 bits (411), Expect = 2e-42
Identities = 75/94 (79%), Positives = 84/94 (89%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 406 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFG 507
T+GKEIVDL LDR+RKLAD CTGLQGFL+F++ G
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVG 142
Score = 160 bits (388), Expect = 1e-39
Identities = 76/105 (72%), Positives = 88/105 (83%)
Frame = +3
Query: 510 GTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFM 689
GTGSG SLL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A +
Sbjct: 144 GTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVL 203
Query: 690 VDNEAIYDICRRNLDIERPTYNQPDRLIGQIVSSINCFFEEFDGA 824
+DNEAIYDICRR+LDIERPTY +RLI QI+SS+ FDGA
Sbjct: 204 LDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSL-RFDGA 247
Score = 110 bits (265), Expect = 9e-25
Identities = 44/63 (69%), Positives = 52/63 (82%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETG
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 163 bits (395), Expect = 2e-40
Identities = 71/94 (75%), Positives = 83/94 (88%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F SG+HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 406 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFG 507
T+G+EIVD L+R+RKLAD CTGLQGFL+F++ G
Sbjct: 109 TVGREIVDTCLERLRKLADNCTGLQGFLVFNAVG 142
Score = 155 bits (376), Expect = 3e-38
Identities = 73/105 (69%), Positives = 87/105 (82%)
Frame = +3
Query: 510 GTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFM 689
GTGSG SLL+ERLSVD+GKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D +
Sbjct: 144 GTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVL 203
Query: 690 VDNEAIYDICRRNLDIERPTYNQPDRLIGQIVSSINCFFEEFDGA 824
+DNEAIYDICRR+LDIERPTY+ +RLI Q +SS+ FDGA
Sbjct: 204 LDNEAIYDICRRSLDIERPTYSNLNRLISQTISSLTTSL-RFDGA 247
Score = 107 bits (257), Expect = 9e-24
Identities = 43/63 (68%), Positives = 51/63 (80%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 105 bits (251), Expect = 5e-23
Identities = 44/84 (52%), Positives = 60/84 (71%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
G++VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 116
Query: 436 LDRIRKLADQCTGLQGFLIFHSFG 507
LD +RK A+ C LQGF + HS G
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLG 140
Score = 93.9 bits (223), Expect = 1e-19
Identities = 39/97 (40%), Positives = 64/97 (65%)
Frame = +3
Query: 510 GTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFM 689
GTGSG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D +
Sbjct: 142 GTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMV 201
Query: 690 VDNEAIYDICRRNLDIERPTYNQPDRLIGQIVSSINC 800
+DNEA+YDIC R L + P++ + LI +S + C
Sbjct: 202 LDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 187
MRE + + GQ G QIG+ WE+ C EHGI P G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGR 35
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 103 bits (247), Expect = 1e-22
Identities = 44/84 (52%), Positives = 60/84 (71%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
G++VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 436 LDRIRKLADQCTGLQGFLIFHSFG 507
LD +RK A+ C LQGF + HS G
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLG 140
Score = 93.5 bits (222), Expect = 2e-19
Identities = 38/97 (39%), Positives = 64/97 (65%)
Frame = +3
Query: 510 GTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFM 689
GTGSG +LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D +
Sbjct: 142 GTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMV 201
Query: 690 VDNEAIYDICRRNLDIERPTYNQPDRLIGQIVSSINC 800
+DNEA+YDIC R L + P++ + LI +S + C
Sbjct: 202 LDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 238
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 263 TYP 271
P
Sbjct: 59 YVP 61
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 103 bits (247), Expect = 1e-22
Identities = 43/84 (51%), Positives = 60/84 (71%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
G++VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 58 GRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 117
Query: 436 LDRIRKLADQCTGLQGFLIFHSFG 507
LD +RK A+ C LQGF + HS G
Sbjct: 118 LDVVRKEAENCDCLQGFQVCHSLG 141
Score = 94.3 bits (224), Expect = 9e-20
Identities = 39/97 (40%), Positives = 64/97 (65%)
Frame = +3
Query: 510 GTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFM 689
GTGSG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D +
Sbjct: 143 GTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMV 202
Query: 690 VDNEAIYDICRRNLDIERPTYNQPDRLIGQIVSSINC 800
+DNEA+YDIC R L + P++ + LI +S + C
Sbjct: 203 LDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 239
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 199
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD 39
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 102 bits (244), Expect = 3e-22
Identities = 44/84 (52%), Positives = 59/84 (70%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
G+ VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 436 LDRIRKLADQCTGLQGFLIFHSFG 507
LD +RK A+ C LQGF + HS G
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLG 140
Score = 93.9 bits (223), Expect = 1e-19
Identities = 39/97 (40%), Positives = 64/97 (65%)
Frame = +3
Query: 510 GTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFM 689
GTGSG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D +
Sbjct: 142 GTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMV 201
Query: 690 VDNEAIYDICRRNLDIERPTYNQPDRLIGQIVSSINC 800
+DNEA+YDIC R L + P++ + LI +S + C
Sbjct: 202 LDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 187
MRE + + GQ G QIG WE+ C EHGI G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGR 35
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 101 bits (243), Expect = 4e-22
Identities = 43/84 (51%), Positives = 60/84 (71%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
GK+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 436 LDRIRKLADQCTGLQGFLIFHSFG 507
LD +RK A+ C LQGF + HS G
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLG 140
Score = 95.1 bits (226), Expect = 5e-20
Identities = 39/97 (40%), Positives = 64/97 (65%)
Frame = +3
Query: 510 GTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFM 689
GTGSG +LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D +
Sbjct: 142 GTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMV 201
Query: 690 VDNEAIYDICRRNLDIERPTYNQPDRLIGQIVSSINC 800
+DNEA+YDIC R L + PT+ + LI +S + C
Sbjct: 202 LDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTC 238
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 263 TYP 271
P
Sbjct: 59 YVP 61
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 101 bits (243), Expect = 4e-22
Identities = 42/84 (50%), Positives = 60/84 (71%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
G++VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 58 GRYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 117
Query: 436 LDRIRKLADQCTGLQGFLIFHSFG 507
LD +RK A+ C LQGF + HS G
Sbjct: 118 LDVVRKEAENCDCLQGFQVCHSLG 141
Score = 94.3 bits (224), Expect = 9e-20
Identities = 39/97 (40%), Positives = 64/97 (65%)
Frame = +3
Query: 510 GTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFM 689
GTGSG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D +
Sbjct: 143 GTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMV 202
Query: 690 VDNEAIYDICRRNLDIERPTYNQPDRLIGQIVSSINC 800
+DNEA+YDIC R L + P++ + LI +S + C
Sbjct: 203 LDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 239
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 247
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNE 54
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 99 bits (238), Expect = 2e-21
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
G+ VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 436 LDRIRKLADQCTGLQGFLIFHSFG 507
LD +RK A+ C LQGF + HS G
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLG 140
Score = 93.9 bits (223), Expect = 1e-19
Identities = 39/97 (40%), Positives = 64/97 (65%)
Frame = +3
Query: 510 GTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFM 689
GTGSG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D +
Sbjct: 142 GTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMV 201
Query: 690 VDNEAIYDICRRNLDIERPTYNQPDRLIGQIVSSINC 800
+DNEA+YDIC R L + P++ + LI +S + C
Sbjct: 202 LDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 263 TYP 271
P
Sbjct: 59 FVP 61
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 99 bits (238), Expect = 2e-21
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
G+ VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 436 LDRIRKLADQCTGLQGFLIFHSFG 507
LD +RK A+ C LQGF + HS G
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLG 140
Score = 93.9 bits (223), Expect = 1e-19
Identities = 39/97 (40%), Positives = 64/97 (65%)
Frame = +3
Query: 510 GTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFM 689
GTGSG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D +
Sbjct: 142 GTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMV 201
Query: 690 VDNEAIYDICRRNLDIERPTYNQPDRLIGQIVSSINC 800
+DNEA+YDIC R L + P++ + LI +S + C
Sbjct: 202 LDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 263 TYP 271
P
Sbjct: 59 FVP 61
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 97.9 bits (233), Expect = 7e-21
Identities = 42/84 (50%), Positives = 59/84 (70%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
GK+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 436 LDRIRKLADQCTGLQGFLIFHSFG 507
LD +RK A+ LQGF + HS G
Sbjct: 117 LDVVRKEAENSDCLQGFQVCHSLG 140
Score = 95.1 bits (226), Expect = 5e-20
Identities = 39/97 (40%), Positives = 64/97 (65%)
Frame = +3
Query: 510 GTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFM 689
GTGSG +LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D +
Sbjct: 142 GTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMV 201
Query: 690 VDNEAIYDICRRNLDIERPTYNQPDRLIGQIVSSINC 800
+DNEA+YDIC R L + PT+ + LI +S + C
Sbjct: 202 LDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTC 238
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTI 208
MRE + + GQ G QIG WE+ C EHGI GQ D +
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL 42
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +3
Query: 510 GTGSGFTSLLMERLSVDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAF 686
GTGSG S L+E L+ Y KK ++++P + S VV+PYNS+LT ++DC
Sbjct: 144 GTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVV 203
Query: 687 MVDNEAIYDICRRNLDIERPTYNQPDRLIGQIVSS 791
++DN A+ I L + PT+ Q + L+ ++S+
Sbjct: 204 VLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSA 238
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Frame = +1
Query: 235 FLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYT 408
F Q D ++PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++
Sbjct: 52 FYQADDQ-HYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ 110
Query: 409 IGKEIVDLVLDRIRKLADQCTGLQGFLIFHS 501
GK + + ++D I + AD L+GF++ HS
Sbjct: 111 -GKGVEEEIMDMIDREADGSDSLEGFVLCHS 140
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 241
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 68.5 bits (160), Expect = 5e-12
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +3
Query: 510 GTGSGFTSLLMERLSVDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAF 686
GTGSG S L+E L+ Y KK ++++P + S VV+PYNS+LT ++DC
Sbjct: 144 GTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVV 203
Query: 687 MVDNEAIYDICRRNLDIERPTYNQPDRLIGQIVSS 791
++DN A+ I L + PT+ Q + L+ ++S+
Sbjct: 204 VLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSA 238
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Frame = +1
Query: 235 FLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYT 408
F Q D ++PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++
Sbjct: 52 FYQADDQ-HYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ 110
Query: 409 IGKEIVDLVLDRIRKLADQCTGLQGFLIFHS 501
GK + + ++D I + AD L+GF++ HS
Sbjct: 111 -GKGVEEEIMDMIDREADGSDSLEGFVLCHS 140
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 241
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = -2
Query: 258 ATPVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 127
A PVS L +SPP +W SGW P +PI
Sbjct: 99 APPVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identical
to endo-polygalacturonase [Arabidopsis thaliana]
GI:2597824
Length = 431
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -3
Query: 737 NVEITA---ADVIDGFIVDHESTVRVLKGCVGGEDRVVGLDDGSGNLR 603
NVEITA + DG + + +RV +G D + ++DG+ NL+
Sbjct: 230 NVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQ 277
>At3g10650.1 68416.m01281 expressed protein
Length = 1309
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = +3
Query: 45 NSTFKHRKKLKSKCVSASLYTLAKPESRSVMPAGSFTAWSTASSL---MARCPQTRPSGV 215
+S F +R K + SL T KP + + G T S S MAR P +RP
Sbjct: 260 DSVFLNRTPFPQKSPTMSLVT--KPSGQRPLENGFVTPRSRGRSAVYSMARTPYSRPQSS 317
Query: 216 ETILSTLSSARPEWQARTP 272
I S ++ +W+ P
Sbjct: 318 VKIGSLFQASPSKWEESLP 336
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 519 SRYLTEGVEDQESLQTGTLVSELADSVQNQIYD 421
S +TEGVED S LV D ++ QI D
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRD 641
>At5g52340.1 68418.m06495 exocyst subunit EXO70 family protein
strong similarity to unknown protein (emb|CAB83315.1);
contains Pfam domain PF03081: Exo70 exocyst complex
subunit;
Length = 695
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +1
Query: 415 KEIVDLVLDRIRKLADQCTG---LQGFLIFHSFGEVPA 519
K+I D +LD + L DQC G + + SFGE A
Sbjct: 350 KKICDQILDGVESLRDQCFGEVTVNSVAVLLSFGEAIA 387
>At5g40360.1 68418.m04896 myb family transcription factor (MYB115)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 359
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 530 SEPRAGTSPKEWKIRNPCRPVHWSASL 450
S P ++P +W I+NP +H SA +
Sbjct: 9 STPNQNSNPHDWDIQNPLFSIHPSAEI 35
>At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1188
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -3
Query: 776 SDETIRLVVGWALNVEITAADVIDGFIVDHESTVRVLK 663
S+E + G L VE+ A +I+ I + EST+++LK
Sbjct: 371 SEEVVTYCAGLPLAVEVLGAFLIERSIREWESTLKLLK 408
>At3g08850.1 68416.m01029 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 1 weak)
Length = 1344
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +3
Query: 63 RKKLKSKCVSASL---YTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILST 233
++++K+ CV+ L T+ P+ + P AW S+ P +ETI
Sbjct: 101 KERMKTGCVALVLCLNITVDPPDVIKISPCARIEAWIDPFSMAP------PKALETIGKN 154
Query: 234 LSSARPEWQAR 266
LS+ WQ R
Sbjct: 155 LSTQYERWQPR 165
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,379,911
Number of Sequences: 28952
Number of extensions: 414544
Number of successful extensions: 1361
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1357
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1892353600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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