Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30462
(721 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 144 1e-33
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 131 1e-29
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 124 3e-27
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 117 3e-25
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 109 5e-23
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 104 2e-21
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 103 6e-21
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 102 1e-20
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 101 2e-20
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 93 6e-18
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 87 3e-16
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 87 5e-16
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 86 9e-16
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 82 2e-14
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 74 3e-12
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 73 5e-12
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 71 4e-11
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 69 9e-11
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 53 6e-06
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 50 4e-05
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 46 7e-04
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 46 0.001
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 46 0.001
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 42 0.020
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 41 0.027
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 41 0.035
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 40 0.062
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 40 0.082
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 39 0.14
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 37 0.58
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 36 0.76
UniRef50_Q30XF1 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 34 3.1
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 34 3.1
UniRef50_Q8D7W5 Cluster: Predicted membrane protein; n=4; Gammap... 33 5.4
UniRef50_A7ARE4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.4
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 33 5.4
UniRef50_Q5GT20 Cluster: Predicted protein, WF-1; n=1; Wolbachia... 33 7.1
UniRef50_Q2SMA8 Cluster: Membrane-bound metallopeptidase; n=1; H... 33 7.1
UniRef50_Q4P582 Cluster: Putative uncharacterized protein; n=1; ... 33 7.1
UniRef50_Q6LTM2 Cluster: Chemotaxis response regulator protein-g... 33 7.1
UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular org... 33 9.4
UniRef50_A0W872 Cluster: Putative uncharacterized protein; n=1; ... 33 9.4
UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides im... 33 9.4
UniRef50_Q8GUM5 Cluster: Nicastrin precursor; n=3; Arabidopsis t... 33 9.4
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 144 bits (350), Expect = 1e-33
Identities = 65/87 (74%), Positives = 77/87 (88%)
Frame = +1
Query: 247 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 426
F +F+L+AE V GR+VL NFHGM LTTDKLR MVKKWQTLIE ++DVKTTDG++LRVFCI
Sbjct: 84 FRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVFCI 143
Query: 427 GFTNKDSLSQRKTCYAQHTQVRAIRKK 507
GFT KDS+SQRKTCYAQH+Q++ IR K
Sbjct: 144 GFTIKDSMSQRKTCYAQHSQIKNIRAK 170
Score = 121 bits (292), Expect = 2e-26
Identities = 56/65 (86%), Positives = 60/65 (92%)
Frame = +2
Query: 59 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 238
+VDPFTRKDWYDVKAP+MF RQVG TLVNRTQGTKIAS+GLKGRVFEVSLADLQ + DA
Sbjct: 21 VVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDA 80
Query: 239 ERSFR 253
ERSFR
Sbjct: 81 ERSFR 85
Score = 107 bits (257), Expect = 3e-22
Identities = 51/80 (63%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Frame = +3
Query: 480 HSGQSNQKEKCE-IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 656
HS N + K II R++T+++L+ VV KL+PDSIAKDIEKAC +YPL DV IRKVKV
Sbjct: 161 HSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKV 220
Query: 657 LKRPRFEISKLMELHGEGGG 716
LK+PRF++S LMELHG+GGG
Sbjct: 221 LKKPRFDLSSLMELHGDGGG 240
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 131 bits (317), Expect = 1e-29
Identities = 60/90 (66%), Positives = 73/90 (81%)
Frame = +1
Query: 247 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 426
F +F+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 427 GFTNKDSLSQRKTCYAQHTQVRAIRKKSVK 516
GFT K + RKT YAQH QVR IRKK ++
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 110 bits (264), Expect = 4e-23
Identities = 49/71 (69%), Positives = 61/71 (85%)
Frame = +3
Query: 498 QKEKCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 677
+K+ EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 678 ISKLMELHGEG 710
+ KLMELHGEG
Sbjct: 225 LGKLMELHGEG 235
Score = 105 bits (251), Expect = 1e-21
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = +2
Query: 59 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 238
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 239 ERSFR 253
R F+
Sbjct: 81 FRKFK 85
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 124 bits (298), Expect = 3e-27
Identities = 57/89 (64%), Positives = 69/89 (77%)
Frame = +1
Query: 241 KVFPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 420
+ + + RL AE VQGRNVL NF GMD TTDKLR +V+KWQTLIEA++DVKTTD Y LR+F
Sbjct: 474 QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLF 533
Query: 421 CIGFTNKDSLSQRKTCYAQHTQVRAIRKK 507
CI FT K +KTCYAQ +Q+R IR+K
Sbjct: 534 CIAFTKKRVNQNKKTCYAQSSQIRQIRRK 562
Score = 100 bits (239), Expect = 4e-20
Identities = 48/64 (75%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
Frame = +2
Query: 65 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD-AE 241
DPF +KDWYD+KAPS+F R VG TLV+RTQGTKIASEGLK RVFE+SLADLQAD D A
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQADEDQAY 476
Query: 242 RSFR 253
R R
Sbjct: 477 RKIR 480
Score = 83.8 bits (198), Expect = 4e-15
Identities = 40/79 (50%), Positives = 58/79 (73%), Gaps = 2/79 (2%)
Frame = +3
Query: 477 AHSGQSNQ--KEKCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKV 650
A S Q Q ++ EI+T T+ +L+E+V K IP+SI ++IEKA IYPL++V IRKV
Sbjct: 551 AQSSQIRQIRRKMREIMTNMATSCDLKELVKKFIPESIGREIEKATSSIYPLQNVYIRKV 610
Query: 651 KVLKRPRFEISKLMELHGE 707
K+LK P+F++ KLME+HG+
Sbjct: 611 KILKAPKFDLGKLMEVHGD 629
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 117 bits (281), Expect = 3e-25
Identities = 57/97 (58%), Positives = 72/97 (74%)
Frame = +1
Query: 241 KVFPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 420
+VF + +L AE V+GRNVL NF+GMDLT+DKLR ++ KW TLIE +DVKTTDGY LRVF
Sbjct: 78 QVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVF 137
Query: 421 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKSVKSLHAT 531
I FT K ++KT YA+ ++V+AIRKK V L T
Sbjct: 138 AICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTET 174
Score = 83.0 bits (196), Expect = 7e-15
Identities = 40/60 (66%), Positives = 49/60 (81%), Gaps = 4/60 (6%)
Frame = +2
Query: 62 VDPFTRKDWYDVKAPSMFSK----RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 229
VDPFTRK+WY V+AP+ F K +VG T VNRTQGTK+AS+GLKGRV+EVSLAD++ D
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMKDD 75
Score = 41.5 bits (93), Expect = 0.020
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 14/82 (17%)
Frame = +3
Query: 498 QKEKCEIITRDVTNSELREVVNKLIPDSI--------------AKDIEKACHGIYPLRDV 635
+K+ +I+T V++++L+ VV+ LI S+ A+ I I+P+ +V
Sbjct: 164 RKKMVDILTETVSSNDLKTVVDYLIGVSLNGVTTNASGFAPTLAEKIRIEGSSIFPIHNV 223
Query: 636 CIRKVKVLKRPRFEISKLMELH 701
IRKVKVLK P+ + +KL EL+
Sbjct: 224 FIRKVKVLKTPKVDAAKLSELY 245
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 109 bits (263), Expect = 5e-23
Identities = 48/71 (67%), Positives = 61/71 (85%)
Frame = +3
Query: 498 QKEKCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 677
+K+ EI+TR+V ++L+EVVNKLIPDSI KD+EKAC IYPL DV +RKVK+LK+P+FE
Sbjct: 112 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPKFE 171
Query: 678 ISKLMELHGEG 710
+ KLMELHGEG
Sbjct: 172 LGKLMELHGEG 182
Score = 91.1 bits (216), Expect = 3e-17
Identities = 44/65 (67%), Positives = 52/65 (80%)
Frame = +2
Query: 59 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 238
+VDPF++KDWYDV AP+MF+ R +G TLV RTQGTKIAS+ GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASD---GRVFEVSLADLQNDEVA 77
Query: 239 ERSFR 253
R F+
Sbjct: 78 FRKFK 82
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +1
Query: 247 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTD 399
F +F+LI E VQG+N L NFHG+DLT+DK+ ++K I +V+T D
Sbjct: 78 FRKFKLITEDVQGKNCLTNFHGVDLTSDKITSQIRKKMMEIMTR-EVQTND 127
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 104 bits (250), Expect = 2e-21
Identities = 48/98 (48%), Positives = 68/98 (69%)
Frame = +1
Query: 247 FPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 426
F + +L + VQG+N L NFHG+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F I
Sbjct: 81 FRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAI 140
Query: 427 GFTNKDSLSQRKTCYAQHTQVRAIRKKSVKSLHATSLT 540
T + +KT YA +Q+RAIR+K + + + T
Sbjct: 141 AVTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREAST 178
Score = 85.4 bits (202), Expect = 1e-15
Identities = 38/57 (66%), Positives = 45/57 (78%)
Frame = +2
Query: 65 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 235
DPF RKDWY +KAP+ F+ R VG TLVNR+ G K A++ LKGR+FEVSLADLQ D D
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQKDED 78
Score = 80.2 bits (189), Expect = 5e-14
Identities = 35/70 (50%), Positives = 54/70 (77%)
Frame = +3
Query: 498 QKEKCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 677
+++ EII R+ + L+++ NKLIP+ I ++IEKA GIYPL++V IRKVK+LK+P+F+
Sbjct: 165 RRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQPKFD 224
Query: 678 ISKLMELHGE 707
+ L+ LHGE
Sbjct: 225 LGGLLALHGE 234
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 103 bits (246), Expect = 6e-21
Identities = 50/91 (54%), Positives = 64/91 (70%)
Frame = +1
Query: 244 VFPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423
+F +F+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F
Sbjct: 6 IFRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFV 65
Query: 424 IGFTNKDSLSQRKTCYAQHTQVRAIRKKSVK 516
I FT K Q+ YAQ T+++ +R + V+
Sbjct: 66 IAFTKKQE-DQKSHAYAQTTRIKKLRAEIVE 95
Score = 73.3 bits (172), Expect = 5e-12
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +3
Query: 504 EKCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEIS 683
E E++ R+V +L+ VV KLIPDSI +D I+PL +RKVKVLK+P+ ++
Sbjct: 92 EIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNEASSIFPLSGALVRKVKVLKKPKLDLG 151
Query: 684 KLMELHGEG 710
+++ELH EG
Sbjct: 152 RILELHSEG 160
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 102 bits (244), Expect = 1e-20
Identities = 45/83 (54%), Positives = 63/83 (75%)
Frame = +1
Query: 256 FRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 435
++ E V G++ L FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT
Sbjct: 86 YKFKCEDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFT 145
Query: 436 NKDSLSQRKTCYAQHTQVRAIRK 504
++ S +KT YA+ Q++ IRK
Sbjct: 146 SRKSNQIKKTSYAKSAQIKKIRK 168
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/54 (61%), Positives = 43/54 (79%)
Frame = +2
Query: 59 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 220
I +PF++K+WY+VK P F +R VG +VN+T GT+IASE LKGRV EV+LADL
Sbjct: 22 IAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADL 75
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 101 bits (242), Expect = 2e-20
Identities = 46/92 (50%), Positives = 65/92 (70%), Gaps = 3/92 (3%)
Frame = +1
Query: 241 KVFPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 420
K + + +L+ + V GRN +F+G+D+T D+L M++KWQTLIEA +D KT DGY++RVF
Sbjct: 82 KAWRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVF 141
Query: 421 CIGFTNKDSL---SQRKTCYAQHTQVRAIRKK 507
+ FT K S S TCYA+ +QVRAIR+K
Sbjct: 142 TLAFTKKTSAGKQSSTSTCYAKSSQVRAIRRK 173
Score = 70.1 bits (164), Expect = 5e-11
Identities = 31/64 (48%), Positives = 46/64 (71%)
Frame = +2
Query: 62 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 241
+DP +RK+WYD +AP FS + G TLV ++ G +IASE +KGRV E +LADL+ D +
Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLADLK-DNSND 81
Query: 242 RSFR 253
+++R
Sbjct: 82 KAWR 85
Score = 53.6 bits (123), Expect = 5e-06
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = +3
Query: 519 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMEL 698
IT + + E LI + K IEK I+PL+++ IRKVKVLKRP+ + +K+ EL
Sbjct: 178 ITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIFPLQNITIRKVKVLKRPKLDATKIAEL 237
Query: 699 H 701
+
Sbjct: 238 Y 238
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 93.1 bits (221), Expect = 6e-18
Identities = 43/64 (67%), Positives = 52/64 (81%)
Frame = +2
Query: 62 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 241
VD ++KDWYD+KAP+MF+ R +G TLV RTQGTKIAS+GLKG VFE+SLADLQ D A
Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVFEMSLADLQNDEVAF 81
Query: 242 RSFR 253
R F+
Sbjct: 82 RKFK 85
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 87.4 bits (207), Expect = 3e-16
Identities = 40/86 (46%), Positives = 58/86 (67%)
Frame = +1
Query: 259 RLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTN 438
+LI + V+G +F+G+D T DK+ M+KK QTLIE ++ ++ DGY+LR+F I FT
Sbjct: 84 KLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIFVIAFTK 143
Query: 439 KDSLSQRKTCYAQHTQVRAIRKKSVK 516
QRKT YAQ +Q++ IRKK V+
Sbjct: 144 SIKNQQRKTTYAQRSQIKDIRKKIVE 169
Score = 65.7 bits (153), Expect = 1e-09
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = +2
Query: 62 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 235
+DP RK+W+++ AP F+ G T +N++ GT +A+E +KGRV E SLADLQ +D
Sbjct: 19 IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGRVVEASLADLQGQSD 76
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/70 (32%), Positives = 47/70 (67%)
Frame = +3
Query: 498 QKEKCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 677
+K+ EI+ ++V+ + +++ +S+AK+I KA I+PL+++ +RKVK++KRP+ +
Sbjct: 164 RKKIVEIVLKEVSKKSITQLLGFFNQESLAKEIGKATRTIFPLQNITLRKVKLVKRPKVD 223
Query: 678 ISKLMELHGE 707
KL E + +
Sbjct: 224 AQKLREFYDD 233
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 86.6 bits (205), Expect = 5e-16
Identities = 35/94 (37%), Positives = 59/94 (62%)
Frame = +1
Query: 241 KVFPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 420
+ + + R + VQGRN+L FH M++TTDK+ +++KW T +E ++VKT DGY +R+F
Sbjct: 82 EAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLF 141
Query: 421 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKSVKSL 522
+ FT + Q + CYA+ V+ +R + K +
Sbjct: 142 VVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMI 175
Score = 74.5 bits (175), Expect = 2e-12
Identities = 32/63 (50%), Positives = 44/63 (69%)
Frame = +2
Query: 65 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 244
+ RK+WYDV AP+ F KRQ T+ N+TQGT+IA++ L+GRVFE +LADL E
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEE 82
Query: 245 SFR 253
++R
Sbjct: 83 AYR 85
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/64 (31%), Positives = 42/64 (65%)
Frame = +3
Query: 513 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 692
++I R ++ +++E V+ L + ++ + + C+ I PLR++ IRKV+V++ P+F+ L+
Sbjct: 173 KMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKFDAQALL 232
Query: 693 ELHG 704
HG
Sbjct: 233 SAHG 236
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 85.8 bits (203), Expect = 9e-16
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = +3
Query: 561 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 707
NKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHG+
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGD 49
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 81.8 bits (193), Expect = 2e-14
Identities = 33/61 (54%), Positives = 48/61 (78%)
Frame = +3
Query: 528 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 707
D ++L+EV+NKL+PD++ KD+EKAC IYPL DV +RKVK+L++P+ ++ KL ELH
Sbjct: 158 DQRRTDLKEVLNKLVPDNVGKDVEKACQFIYPLHDVFVRKVKILQKPKLDLGKLPELHAL 217
Query: 708 G 710
G
Sbjct: 218 G 218
Score = 72.1 bits (169), Expect = 1e-11
Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +1
Query: 244 VFPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 423
V +F+LI E ++G+N L N +GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC
Sbjct: 65 VVRKFKLITEDMRGKNGLTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFC 123
Query: 424 IGF-TNKDSLSQRKTCYAQHTQVRAI 498
+G+ TN + R+ AQ+ QV I
Sbjct: 124 VGYTTNVTTRYARQLVCAQYQQVHQI 149
Score = 61.3 bits (142), Expect = 2e-08
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = +2
Query: 77 RKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFR 253
+KD YDVKA +MF+ R +G T V R Q TK+ S GL G VFE SLA LQ D R F+
Sbjct: 12 KKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNGLVFEASLASLQNDKVVVRKFK 70
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 74.1 bits (174), Expect = 3e-12
Identities = 34/76 (44%), Positives = 48/76 (63%)
Frame = +1
Query: 277 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 456
++G + F GM+LT+DK + M+KKW TLIEA D+ DG V RVF +G T +
Sbjct: 43 IKGSECVGFFDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMGVTRRHPGYV 102
Query: 457 RKTCYAQHTQVRAIRK 504
+KTCY +H+ + IRK
Sbjct: 103 KKTCYVKHSDEKKIRK 118
Score = 43.2 bits (97), Expect = 0.007
Identities = 18/62 (29%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = +3
Query: 480 HSGQSN-QKEKCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 656
HS + +K ++I +++ ++++++ KL +++ K IE+ I+PL++ C+RKVK
Sbjct: 110 HSDEKKIRKIMFDVIEEELSGCDVQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVKT 169
Query: 657 LK 662
+K
Sbjct: 170 IK 171
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 73.3 bits (172), Expect = 5e-12
Identities = 34/80 (42%), Positives = 52/80 (65%)
Frame = +1
Query: 283 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 462
G V F GM LT DKL +++K++T+I+A++D KT DG++LR+F IGFT K + S +
Sbjct: 89 GSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKN 148
Query: 463 TCYAQHTQVRAIRKKSVKSL 522
YA + R +R +K+L
Sbjct: 149 HTYANSHKARQVRDVMIKAL 168
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 70.5 bits (165), Expect = 4e-11
Identities = 34/91 (37%), Positives = 52/91 (57%)
Frame = +1
Query: 253 QFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF 432
+F L + V L NFHGMD+T K + +K I+ +D+ TTDGY+LRVF I F
Sbjct: 83 KFYLQTQLVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAF 142
Query: 433 TNKDSLSQRKTCYAQHTQVRAIRKKSVKSLH 525
T++ +RK C+ + +R +R ++LH
Sbjct: 143 TDRFRFQRRKNCHVKGRVIRMMRAGIYETLH 173
Score = 57.6 bits (133), Expect = 3e-07
Identities = 23/52 (44%), Positives = 36/52 (69%)
Frame = +2
Query: 65 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 220
DP+ +K+WY V AP+ F R +G T V +T G ++A++ + RV+EV+L DL
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGDL 71
Score = 35.1 bits (77), Expect = 1.8
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +3
Query: 513 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 692
E + ++ + +V KL + + +A I RDV IR+VKV+KRPR + L
Sbjct: 170 ETLHNELGKVSIPVLVTKLSNFEVNAKLTEALQKITMCRDVMIRRVKVVKRPRNTMELLS 229
Query: 693 ELH 701
+H
Sbjct: 230 TMH 232
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 69.3 bits (162), Expect = 9e-11
Identities = 30/68 (44%), Positives = 44/68 (64%)
Frame = +1
Query: 304 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 483
FHG+ LT DK+ ++KKW TLIE ++ KT DGY L++F I + K + KT Y +
Sbjct: 96 FHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSS 155
Query: 484 QVRAIRKK 507
Q RA+R++
Sbjct: 156 QKRALRRR 163
Score = 36.3 bits (80), Expect = 0.76
Identities = 15/50 (30%), Positives = 32/50 (64%)
Frame = +3
Query: 513 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 662
+II ++ N ++++ ++++ I + IE C I+P+ V IRK+KV++
Sbjct: 166 DIIIKEGINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIKVVE 215
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 53.2 bits (122), Expect = 6e-06
Identities = 29/77 (37%), Positives = 47/77 (61%)
Frame = -1
Query: 235 VSVSL*ISQGNFENSSLQSFRSNFRSLGTVDKRGADLPLAEHRRSLDIVPIFASEWVDNL 56
+ + L ISQGN ++S L+ FR + S + +K A++ AE RR L+++P+ S+ V L
Sbjct: 76 ILIVLNISQGNLKHSVLEPFRGDLGSQSSANKGFANISDAEDRRRLNVIPVLLSKRVGCL 135
Query: 55 LLNTFFTALRQAFIFPD 5
LL++ F L +FPD
Sbjct: 136 LLSSLF-PLGNPLVFPD 151
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 50.4 bits (115), Expect = 4e-05
Identities = 30/94 (31%), Positives = 53/94 (56%)
Frame = +1
Query: 277 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 456
V+G L F G++LT D +R +V+K + + A +VKT DG V+R+ +G T +
Sbjct: 82 VEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGITTHRIGTA 141
Query: 457 RKTCYAQHTQVRAIRKKSVKSLHATSLTLNSGRW 558
+K+ A+RKK +++L + L+SG++
Sbjct: 142 QKS---------AMRKKMIETLVKKAAELDSGQF 166
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/50 (46%), Positives = 35/50 (70%)
Frame = +1
Query: 310 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 459
G +LTTD +R +VK+ + I+AN+DV+T DG+V+RV FT K + S +
Sbjct: 84 GHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIKRARSSQ 133
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 45.6 bits (103), Expect = 0.001
Identities = 17/27 (62%), Positives = 25/27 (92%)
Frame = +3
Query: 627 RDVCIRKVKVLKRPRFEISKLMELHGE 707
R +C++KVK+LK+P+FE+ KLMELHG+
Sbjct: 63 RVMCLKKVKMLKKPKFELGKLMELHGD 89
Score = 41.5 bits (93), Expect = 0.020
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +2
Query: 59 IVDPFTRKDWYDVKAPSMFSKRQVGTT 139
++D F++KDWYDVKA +MF+ R +G T
Sbjct: 21 VIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +1
Query: 277 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 456
VQG N F G D+TTD +R M+++ ++ I+ +V+T+DGY +RV + ++ S
Sbjct: 77 VQGTNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKVLTVPDRRIKSS 136
Query: 457 RKT 465
KT
Sbjct: 137 IKT 139
Score = 34.7 bits (76), Expect = 2.3
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +3
Query: 498 QKEKCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 677
+K+ E +T E V +I D +++ K IYP+R + IRK +VL P +
Sbjct: 142 RKKIQEYLTEKARAMTFSEYVKYIISDDAPRELSKELKVIYPVRRIEIRKSEVLHFPEEK 201
Query: 678 ISKLM 692
I +L+
Sbjct: 202 IVELV 206
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 41.5 bits (93), Expect = 0.020
Identities = 29/80 (36%), Positives = 41/80 (51%)
Frame = +1
Query: 277 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 456
V+G F G L D +R +V++ + I+ IDV T DGY +RV + FT
Sbjct: 66 VEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFT------- 118
Query: 457 RKTCYAQHTQVRAIRKKSVK 516
T A+ +Q RAIRK+ K
Sbjct: 119 --TRRAKTSQQRAIRKEMFK 136
Score = 33.5 bits (73), Expect = 5.4
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = +3
Query: 498 QKEKCEIITRDVTNSELREVVNKLIP----DSIAKDIEKACHGIYPLRDVCIRKVKVLKR 665
+KE ++I + + E + + + +SI + I++A IYP+R IRK +VL+
Sbjct: 131 RKEMFKVIEENAKECDFDEFIRRCLSISEEESIPEQIKEAGRKIYPIRQAEIRKTEVLEE 190
Query: 666 P 668
P
Sbjct: 191 P 191
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 41.1 bits (92), Expect = 0.027
Identities = 29/89 (32%), Positives = 47/89 (52%)
Frame = +1
Query: 175 GRIEGKSFRSFPG*STS*H*RGKVFPQFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 354
G++ G+ S G T + + FR+ E + G + +F G +LT D +R +VK+
Sbjct: 40 GKMIGRVMESTLGDVTGDWTKQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKR 97
Query: 355 WQTLIEANIDVKTTDGYVLRVFCIGFTNK 441
+ I+AN+ V T DG+ +RV I T K
Sbjct: 98 RTSKIDANVVVTTKDGFKVRVKPIVLTVK 126
Score = 37.5 bits (83), Expect = 0.33
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +2
Query: 62 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 229
VD F K+WY V AP+ F++ +G TL + G I GRV E +L D+ D
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD-DPGKMI------GRVMESTLGDVTGD 57
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 40.7 bits (91), Expect = 0.035
Identities = 25/73 (34%), Positives = 40/73 (54%)
Frame = +1
Query: 316 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 495
+LT D LR +V++ + +EA+I V TTD Y +RV + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALTTKK---------ADRSQEKA 133
Query: 496 IRKKSVKSLHATS 534
IR+ + +HA +
Sbjct: 134 IRRVMIDKVHAAA 146
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 39.9 bits (89), Expect = 0.062
Identities = 30/94 (31%), Positives = 51/94 (54%)
Frame = +1
Query: 160 NENCFGRIEGKSFRSFPG*STS*H*RGKVFPQFRLIAEYVQGRNVLCNFHGMDLTTDKLR 339
+E+ GRI + + F G T H V +FR ++E V G++ L F G T+ +R
Sbjct: 51 DEHIIGRIYEMTQQEFNGDFTKMH----VMLRFR-VSETV-GQDALTTFVGHHHQTNHIR 104
Query: 340 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 441
+++++ I+ IDV T DGY++R+ + T K
Sbjct: 105 RQIRRYRGKIDDVIDVVTEDGYLVRIKPLIITQK 138
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 39.5 bits (88), Expect = 0.082
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +1
Query: 154 PGNE--NCFGRIEGKSFRSFPG*STS*H*RGKVFPQFRLIAEYVQGRNVLCNFHGMDLTT 327
P N+ N GRI S R T+ H + F++ + V G N F G D T
Sbjct: 42 PANDPANLIGRISEISLRDL----TNEHSKHMTRMYFKV--DGVSGNNATSQFVGHDTTR 95
Query: 328 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKT 465
+ L+ V++ ++ I A ++V+T DG+ +RV + T + KT
Sbjct: 96 EYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT 141
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 38.7 bits (86), Expect = 0.14
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 277 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT-NKDSLS 453
V G N F +LT + L + ++ + IE +DV T DGY LRV + FT + S
Sbjct: 76 VAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFTVRRCKTS 135
Query: 454 QRKTCYAQHTQV 489
Q++ A Q+
Sbjct: 136 QKRAIRAIMRQI 147
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 36.7 bits (81), Expect = 0.58
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +1
Query: 280 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 435
+G + F G +L+ D +R +V++ + I +D+ T DG+ LRV + T
Sbjct: 79 EGERLFTEFAGHELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVKTLALT 130
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 36.3 bits (80), Expect = 0.76
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 277 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 456
V+G F G +L D +R + ++ + + +V T DGY LRV + FT + +
Sbjct: 70 VEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFTRQRCKTS 129
Query: 457 RKT 465
+K+
Sbjct: 130 QKS 132
>UniRef50_Q30XF1 Cluster: Putative uncharacterized protein; n=1;
Desulfovibrio desulfuricans G20|Rep: Putative
uncharacterized protein - Desulfovibrio desulfuricans
(strain G20)
Length = 351
Score = 35.5 bits (78), Expect = 1.3
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -3
Query: 569 QLVHHLPEFRVSDVACNDFTLFFLIALT*VCWA*HVLRWLKESLLVKPMQKT 414
+L+H + S AC D FF+ LT + A H +RWL+E+ ++ +Q T
Sbjct: 117 RLLHRWRNGKASVTACLDDYAFFIAGLTALYEATHEVRWLREAAALQQVQDT 168
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 34.3 bits (75), Expect = 3.1
Identities = 19/70 (27%), Positives = 37/70 (52%)
Frame = +1
Query: 304 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 483
F+G L+ D + MV K L+E +I + T V+ +F + +T +L Y + +
Sbjct: 98 FNGFRLSYDFIFSMVLKPTKLVEFSIKINTLKKKVVEIFVL-YTITKNLHSNSITYGKRS 156
Query: 484 QVRAIRKKSV 513
++R I ++S+
Sbjct: 157 RIRKINRESI 166
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 34.3 bits (75), Expect = 3.1
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 316 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS-LSQRKTCYAQHTQVR 492
+LT D LR +V++ + +EA I V TTD Y +++ + T K + SQ K + T +
Sbjct: 83 ELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKKADASQEKA--IRRTMID 140
Query: 493 AIRK 504
+R+
Sbjct: 141 LVRE 144
>UniRef50_Q8D7W5 Cluster: Predicted membrane protein; n=4;
Gammaproteobacteria|Rep: Predicted membrane protein -
Vibrio vulnificus
Length = 423
Score = 33.5 bits (73), Expect = 5.4
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = -3
Query: 395 VVFTSMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNCGKTFPRQCQLVD 216
V+FTS+ A + LT+ S ++ R P T+ P S I L+CG FPR ++
Sbjct: 211 VLFTSVFAGLSSSTALTLQFS-NLSREQP-----TISPLLASGILLSCGTMFPRLLVVLS 264
Query: 215 --QPGKLRKLFPSIL 177
P + +L+P +L
Sbjct: 265 VLNPALVTQLWPIVL 279
>UniRef50_A7ARE4 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 451
Score = 33.5 bits (73), Expect = 5.4
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +3
Query: 456 TQDVLRPAHSGQSNQKEKCEI--ITRDVTNSELREVVNKLIPDSIAKD 593
TQ+V+ +H+ + ++ +C I + +DVT ELR+ +N S KD
Sbjct: 327 TQEVINDSHAQKMRERGRCVIMGLPKDVTVDELRKAINNRFATSNKKD 374
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 33.5 bits (73), Expect = 5.4
Identities = 18/74 (24%), Positives = 40/74 (54%)
Frame = +1
Query: 304 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 483
F + + + LR +V++ + + +DVKT+DGYV R+ + T + + +K +A
Sbjct: 82 FKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK--HALRL 139
Query: 484 QVRAIRKKSVKSLH 525
+R + + +V ++
Sbjct: 140 IIRDVIENTVPQMN 153
>UniRef50_Q5GT20 Cluster: Predicted protein, WF-1; n=1; Wolbachia
endosymbiont strain TRS of Brugia malayi|Rep: Predicted
protein, WF-1 - Wolbachia sp. subsp. Brugia malayi
(strain TRS)
Length = 128
Score = 33.1 bits (72), Expect = 7.1
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +3
Query: 507 KCEIITRDVTNSELREVVNK---LIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 677
+CE + D+ N ++VNK + D + DI+ I +DV I VKV+ P+ E
Sbjct: 41 QCEKVKSDLKNPAYEDIVNKDTQIQEDGLVVDIDNCYFYIKYPQDVIIEVVKVINSPKVE 100
>UniRef50_Q2SMA8 Cluster: Membrane-bound metallopeptidase; n=1;
Hahella chejuensis KCTC 2396|Rep: Membrane-bound
metallopeptidase - Hahella chejuensis (strain KCTC 2396)
Length = 386
Score = 33.1 bits (72), Expect = 7.1
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Frame = +3
Query: 444 LLEPTQDVLRPAHSGQSNQKEKCEIITRDVTNSELREVVNKLIP--------DSIAKDIE 599
LLE + R + +S +KE+ +T+ NS L N+L +++ K++E
Sbjct: 187 LLESRNTLARSKETLESQRKEREATLTK--LNSSLNYKQNELTRMQKNQKQLETLVKEVE 244
Query: 600 KACHGIYPLRD-VCIRKVKVLKRPRFEISKLMELHGEGGGG 719
KA + +D V K++ K P+ L +LHG+ GGG
Sbjct: 245 KAISNLELTQDSVPFSKLRA-KLPKPTKGALQQLHGQSGGG 284
>UniRef50_Q4P582 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 606
Score = 33.1 bits (72), Expect = 7.1
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -2
Query: 720 CLHRLRREVPSTSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQ 583
C R R P+T R S + P CKHR+ + P PW+
Sbjct: 248 CALRPRCFAPATDEPRLNGSHSPPPKSCKHRSSSKSASGPDDIPWR 293
>UniRef50_Q6LTM2 Cluster: Chemotaxis response regulator
protein-glutamate methylesterase 2; n=3;
Gammaproteobacteria|Rep: Chemotaxis response regulator
protein-glutamate methylesterase 2 - Photobacterium
profundum (Photobacterium sp. (strain SS9))
Length = 394
Score = 33.1 bits (72), Expect = 7.1
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 495 NQKEKCEIITRDVTNSELREVVNKLIPDSIAKDIE-KACHGIYPLRDVCIRKVKVLKRPR 671
N + E+I V E E+V KL PD I DIE GI +R++ +KVL P
Sbjct: 23 NADPRLEVIGNAVNGKEAVELVKKLQPDVITMDIEMPVMDGITAVREI----MKVLPTPI 78
Query: 672 FEISKLME 695
S L +
Sbjct: 79 LMFSSLTQ 86
>UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular
organisms|Rep: L-Amino-acid oxidase - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 434
Score = 32.7 bits (71), Expect = 9.4
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 314 WTSQPISSGGWL--KNGRLSSKPTLM*RQPMDTFYVSSALVSPI 439
W + P S GGW+ + G L+ LM RQP + + A ++PI
Sbjct: 363 WANDPFSKGGWMHHRPGNLTQAAPLM-RQPHGRIHFAGADIAPI 405
>UniRef50_A0W872 Cluster: Putative uncharacterized protein; n=1;
Geobacter lovleyi SZ|Rep: Putative uncharacterized
protein - Geobacter lovleyi SZ
Length = 288
Score = 32.7 bits (71), Expect = 9.4
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 253 QFRLIAEYVQGRNVLCNFH-GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIG 429
QFRL E+++G N + + MD T K R VK+W TL D + ++ G
Sbjct: 204 QFRLCCEWLKGCNKIKTLNRSMDSYTLKRR--VKRWATLKGVEDDYVSNGAFIAAAIHCG 261
Query: 430 FTNK 441
FT K
Sbjct: 262 FTLK 265
>UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 363
Score = 32.7 bits (71), Expect = 9.4
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 543 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLME 695
EL V + +P + AK + CH Y L D ++ +K RFE L+E
Sbjct: 60 ELLWEVTRHLPPASAKMLAYTCHKFYHLSDTWLKNIKFFPVERFETLCLLE 110
>UniRef50_Q8GUM5 Cluster: Nicastrin precursor; n=3; Arabidopsis
thaliana|Rep: Nicastrin precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 676
Score = 32.7 bits (71), Expect = 9.4
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = -2
Query: 516 FHTFLSDCSDLSVLGVARLA--LAQGVLIGETNAEDT*NVSIGCLHINVGFDESL 358
+H+ L D S+++ V A +A+ + I ++ +DT N ++G +H+N F E L
Sbjct: 433 YHSHLDDLSNINSSSVVAAASVVARTLYILASDNKDTSNSALGSIHVNASFVEEL 487
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 734,072,836
Number of Sequences: 1657284
Number of extensions: 15477700
Number of successful extensions: 46326
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 44474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46317
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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